ERS5191847 SAMEA7433629 623 Shigella flexneri This sample represents a metagenomic bin co-assembled from the metagenomic run(s) of subject 1377560498: SRR7566622,SRR7562903,SRR7564348,SRR7562573,SRR7562695,SRR7567698,SRR7561947,SRR7563281,SRR7566081,SRR7566303,SRR7569392,SRR7559802,SRR7556912,SRR7569227,SRR7560034,SRR7565480,SRR7568494,SRR7566004,SRR7562696,SRR7561944,SRR7561612,SRR7559610 ENA-FIRST-PUBLIC 2021-01-30T04:10:03Z ENA-LAST-UPDATE 2020-10-15T07:01:11Z External Id SAMEA7433629 INSDC center name Pan Lab at OU INSDC first public 2021-01-30T04:10:03Z INSDC last update 2020-10-15T07:01:11Z INSDC status public MAG coverage software bowtie2; v2.3.5.1 Submitter Id TEDDY_OU_SUBJ1377560498_MAG50 assembly quality Many fragments with little to no review of assembly other than reporting of standard assembly statistics assembly software SPAdes;3.13.1;default parameters with metaSPAdes mode binning parameters --minContig 2000 binning software MetaBAT;2.12.1 collection date not provided completeness score 93.04 completeness software CheckM;v1.0.13 contamination score 0.20 environment (biome) human gut environment (feature) human gut environment (material) fecal geographic location (country and/or sea) restricted access geographic location (latitude) restricted access geographic location (longitude) restricted access host sex male investigation type metagenome-assembled genome isolation source human gut metagenomic source human gut metagenome project name PRJEB40730 sample derived from SAMN09409276,SAMN09409389,SAMN09409514,SAMN09409828,SAMN09410043,SAMN09410092,SAMN09410910,SAMN09411105,SAMN09411114,SAMN09412312,SAMN09413036,SAMN09413304,SAMN09413812,SAMN09414790,SAMN09415089,SAMN09415435,SAMN09416678,SAMN09416780,SAMN09417624,SAMN09418484,SAMN09419621,SAMN09419823 sample name TEDDY_OU_SUBJ1377560498_MAG50 scientific_name Shigella flexneri sequencing method Illumina HiSeq 2000 taxonomic classification GTDB-Tk;v1.3.0(reference from GTDB Release 95,species rank classification,default parameters) taxonomic identity marker multi-marker approach