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<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="SC_EXP_12045_3#63" center_name="The Wellcome Trust Sanger Institute" accession="ERX451728">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451728</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#63</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#63</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091848, constructed from sample accession ERS379222 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TGTGAAGA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379222" refname="ECO0744-sc-1790592" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379222</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271755</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0744-sc-1790592</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091848</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#64" center_name="The Wellcome Trust Sanger Institute" accession="ERX451729">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451729</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#64</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#64</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091860, constructed from sample accession ERS379223 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TCTCTTCA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379223" refname="ECO0813-sc-1790593" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379223</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271756</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0813-sc-1790593</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091860</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#65" center_name="The Wellcome Trust Sanger Institute" accession="ERX451730">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451730</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#65</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#65</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091777, constructed from sample accession ERS379224 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TTGTTCCA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379224" refname="ECO1119-sc-1790594" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379224</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271757</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO1119-sc-1790594</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091777</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#66" center_name="The Wellcome Trust Sanger Institute" accession="ERX451731">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451731</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#66</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#66</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091789, constructed from sample accession ERS379225 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TGAAGCCA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379225" refname="ECO0580-sc-1790595" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379225</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271758</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0580-sc-1790595</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091789</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#67" center_name="The Wellcome Trust Sanger Institute" accession="ERX451732">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451732</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#67</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#67</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091801, constructed from sample accession ERS379226 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TACCACCA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379226" refname="ECO0582-sc-1790596" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379226</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271759</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0582-sc-1790596</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091801</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#57" center_name="The Wellcome Trust Sanger Institute" accession="ERX451722">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451722</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#57</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#57</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091776, constructed from sample accession ERS379216 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TCTACGAC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379216" refname="ECO0806-sc-1790586" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379216</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271749</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0806-sc-1790586</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091776</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#58" center_name="The Wellcome Trust Sanger Institute" accession="ERX451723">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451723</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#58</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#58</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091788, constructed from sample accession ERS379217 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TGACAGAC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379217" refname="ECO0569-sc-1790587" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379217</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271750</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0569-sc-1790587</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091788</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#59" center_name="The Wellcome Trust Sanger Institute" accession="ERX451724">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451724</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#59</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#59</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091800, constructed from sample accession ERS379218 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TAGAACAC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379218" refname="ECO0546-sc-1790588" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379218</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271751</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0546-sc-1790588</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091800</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#60" center_name="The Wellcome Trust Sanger Institute" accession="ERX451725">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451725</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#60</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#60</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091812, constructed from sample accession ERS379219 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TCATCCTA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379219" refname="ECO1113-sc-1790589" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379219</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271752</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO1113-sc-1790589</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091812</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#61" center_name="The Wellcome Trust Sanger Institute" accession="ERX451726">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451726</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#61</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#61</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091824, constructed from sample accession ERS379220 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TGCTGATA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379220" refname="ECO0680-sc-1790590" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379220</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271753</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO0680-sc-1790590</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091824</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12045_3#62" center_name="The Wellcome Trust Sanger Institute" accession="ERX451727">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX451727</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12045_3#62</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12045_3#62</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003992" refname="Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003992</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Escherichia_coli__PHE___BSAC_collections__sequencing-sc-2013-10-04T12:52:33Z-2796</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9091836, constructed from sample accession ERS379221 for study accession ERP003992.  This is part of an Illumina multiplexed sequencing run (12045_3).  This submission includes reads tagged with the sequence TAGACGGA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS379221" refname="ECO1203-sc-1790591" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS379221</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2271754</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">ECO1203-sc-1790591</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9091836</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="250"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
