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      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#14</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
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        <PRIMARY_ID>ERP003866</PRIMARY_ID>
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      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717114, constructed from sample accession ERS423649 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence AGTTCC.</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>ERS423649</PRIMARY_ID>
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          <SUBMITTER_ID namespace="SC">T1_45_6_RNA-sc-1884513</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717114</LIBRARY_NAME>
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        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
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      <PRIMARY_ID>ERX522633</PRIMARY_ID>
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      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#15</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
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        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
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    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717115, constructed from sample accession ERS423650 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence ATGTCA.</DESIGN_DESCRIPTION>
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        <LIBRARY_NAME>9717115</LIBRARY_NAME>
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        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#16" accession="ERX522634">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522634</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#16</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#16</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717116, constructed from sample accession ERS423651 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence CCGTCC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423651" refname="T2_47_2_RNA-sc-1884515" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423651</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417190</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_47_2_RNA-sc-1884515</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717116</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>ERX522635</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#17</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#17</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717117, constructed from sample accession ERS423652 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GTCCGC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423652" refname="T2_46_4_RNA-sc-1884516" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423652</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417191</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_46_4_RNA-sc-1884516</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717117</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#18" accession="ERX522636">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522636</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#18</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#18</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717118, constructed from sample accession ERS423653 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GTGAAA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423653" refname="T2_45_4_RNA-sc-1884517" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423653</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417192</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_45_4_RNA-sc-1884517</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717118</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#19" accession="ERX522637">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522637</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#19</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#19</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717119, constructed from sample accession ERS423654 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GTGGCC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423654" refname="T1_43_2_RNA-sc-1884518" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423654</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417193</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_43_2_RNA-sc-1884518</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717119</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#20" accession="ERX522638">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522638</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#20</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#20</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717120, constructed from sample accession ERS423655 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GTTTCG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423655" refname="T1_47_4_RNA-sc-1884519" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423655</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417194</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_47_4_RNA-sc-1884519</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717120</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>ERX522639</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#21</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#21</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717121, constructed from sample accession ERS423656 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence CGTACG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423656" refname="T1_43_6_RNA-sc-1884520" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423656</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417195</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_43_6_RNA-sc-1884520</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717121</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>ERX522640</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#22</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#22</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717122, constructed from sample accession ERS423657 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GAGTGG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423657" refname="T1_46_4_RNA-sc-1884521" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423657</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417196</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_46_4_RNA-sc-1884521</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717122</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#23" accession="ERX522641">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522641</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#23</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#23</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717123, constructed from sample accession ERS423658 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence ACTGAT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423658" refname="T2_45_6_RNA-sc-1884522" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423658</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417197</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_45_6_RNA-sc-1884522</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717123</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#24" accession="ERX522642">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522642</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#24</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#24</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717124, constructed from sample accession ERS423659 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence ATTCCT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423659" refname="T2_47_1_RNA-sc-1884523" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423659</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417198</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_47_1_RNA-sc-1884523</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717124</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#1" accession="ERX522595">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522595</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#1</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717101, constructed from sample accession ERS423636 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence ATCACG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423636" refname="T1_42_1_RNA-sc-1884500" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423636</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417175</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_42_1_RNA-sc-1884500</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717101</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#2" accession="ERX522596">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522596</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#2</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717102, constructed from sample accession ERS423637 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence CGATGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423637" refname="T2_42_7_RNA-sc-1884501" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423637</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417176</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_42_7_RNA-sc-1884501</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717102</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#3" accession="ERX522597">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522597</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#3</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717103, constructed from sample accession ERS423638 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence TTAGGC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423638" refname="T1_46_6_RNA-sc-1884502" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423638</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417177</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_46_6_RNA-sc-1884502</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717103</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#4" accession="ERX522598">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522598</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#4</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#4</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717104, constructed from sample accession ERS423639 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence TGACCA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423639" refname="T2_43_3_RNA-sc-1884503" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423639</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417178</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_43_3_RNA-sc-1884503</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717104</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#5" accession="ERX522599">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522599</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#5</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#5</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717105, constructed from sample accession ERS423640 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence ACAGTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423640" refname="T2_42_1_RNA-sc-1884504" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423640</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417179</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_42_1_RNA-sc-1884504</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717105</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#6" accession="ERX522600">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522600</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#6</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#6</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717106, constructed from sample accession ERS423641 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GCCAAT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423641" refname="T2_45_2_RNA-sc-1884505" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423641</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417180</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_45_2_RNA-sc-1884505</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717106</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#7" accession="ERX522601">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522601</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#7</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#7</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717107, constructed from sample accession ERS423642 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence CAGATC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423642" refname="T1_42_7_RNA-sc-1884506" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423642</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417181</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_42_7_RNA-sc-1884506</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717107</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#8" accession="ERX522602">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522602</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#8</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#8</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717108, constructed from sample accession ERS423643 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence ACTTGA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423643" refname="T2_47_4_RNA-sc-1884507" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423643</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417182</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_47_4_RNA-sc-1884507</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717108</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#9" accession="ERX522603">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522603</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#9</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#9</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717109, constructed from sample accession ERS423644 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GATCAG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423644" refname="T1_47_1_RNA-sc-1884508" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423644</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417183</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_47_1_RNA-sc-1884508</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717109</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#10" accession="ERX522604">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522604</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#10</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#10</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717110, constructed from sample accession ERS423645 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence TAGCTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423645" refname="T2_43_2_RNA-sc-1884509" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423645</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417184</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_43_2_RNA-sc-1884509</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717110</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#11" accession="ERX522605">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522605</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#11</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#11</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717111, constructed from sample accession ERS423646 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GGCTAC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423646" refname="T2_46_6_RNA-sc-1884510" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423646</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417185</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_46_6_RNA-sc-1884510</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717111</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#12" accession="ERX522606">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522606</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#12</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#12</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717112, constructed from sample accession ERS423647 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence CTTGTA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423647" refname="T1_45_2_RNA-sc-1884511" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423647</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417186</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_45_2_RNA-sc-1884511</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717112</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#13" accession="ERX522607">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522607</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#13</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#13</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717113, constructed from sample accession ERS423648 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence AGTCAA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423648" refname="T2_43_6_RNA-sc-1884512" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423648</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417187</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_43_6_RNA-sc-1884512</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717113</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#14" accession="ERX522608">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522608</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#14</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#14</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717114, constructed from sample accession ERS423649 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence AGTTCC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423649" refname="T1_45_6_RNA-sc-1884513" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423649</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417188</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_45_6_RNA-sc-1884513</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717114</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#15" accession="ERX522609">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522609</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#15</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#15</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717115, constructed from sample accession ERS423650 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence ATGTCA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423650" refname="T1_47_2_RNA-sc-1884514" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423650</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417189</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_47_2_RNA-sc-1884514</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717115</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#16" accession="ERX522610">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522610</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#16</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#16</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717116, constructed from sample accession ERS423651 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence CCGTCC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423651" refname="T2_47_2_RNA-sc-1884515" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423651</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417190</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_47_2_RNA-sc-1884515</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717116</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#17" accession="ERX522611">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522611</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#17</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#17</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717117, constructed from sample accession ERS423652 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GTCCGC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423652" refname="T2_46_4_RNA-sc-1884516" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423652</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417191</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_46_4_RNA-sc-1884516</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717117</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#18" accession="ERX522612">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522612</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#18</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#18</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717118, constructed from sample accession ERS423653 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GTGAAA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423653" refname="T2_45_4_RNA-sc-1884517" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423653</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417192</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_45_4_RNA-sc-1884517</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717118</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#19" accession="ERX522613">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522613</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#19</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#19</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717119, constructed from sample accession ERS423654 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GTGGCC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423654" refname="T1_43_2_RNA-sc-1884518" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423654</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417193</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_43_2_RNA-sc-1884518</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717119</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#20" accession="ERX522614">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522614</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#20</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#20</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717120, constructed from sample accession ERS423655 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GTTTCG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423655" refname="T1_47_4_RNA-sc-1884519" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423655</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417194</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_47_4_RNA-sc-1884519</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717120</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#21" accession="ERX522615">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522615</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#21</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#21</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717121, constructed from sample accession ERS423656 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence CGTACG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423656" refname="T1_43_6_RNA-sc-1884520" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423656</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417195</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_43_6_RNA-sc-1884520</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717121</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#22" accession="ERX522616">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522616</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#22</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#22</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717122, constructed from sample accession ERS423657 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence GAGTGG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423657" refname="T1_46_4_RNA-sc-1884521" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423657</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417196</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_46_4_RNA-sc-1884521</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717122</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#23" accession="ERX522617">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522617</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#23</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#23</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717123, constructed from sample accession ERS423658 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence ACTGAT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423658" refname="T2_45_6_RNA-sc-1884522" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423658</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417197</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_45_6_RNA-sc-1884522</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717123</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_1#24" accession="ERX522618">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522618</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_1#24</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_1#24</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717124, constructed from sample accession ERS423659 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_1).  This submission includes reads tagged with the sequence ATTCCT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423659" refname="T2_47_1_RNA-sc-1884523" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423659</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417198</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_47_1_RNA-sc-1884523</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717124</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#1" accession="ERX522619">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522619</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#1</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717101, constructed from sample accession ERS423636 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence ATCACG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423636" refname="T1_42_1_RNA-sc-1884500" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423636</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417175</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_42_1_RNA-sc-1884500</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717101</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#2" accession="ERX522620">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522620</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#2</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717102, constructed from sample accession ERS423637 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence CGATGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423637" refname="T2_42_7_RNA-sc-1884501" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423637</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417176</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_42_7_RNA-sc-1884501</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717102</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#3" accession="ERX522621">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522621</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#3</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717103, constructed from sample accession ERS423638 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence TTAGGC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423638" refname="T1_46_6_RNA-sc-1884502" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423638</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417177</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_46_6_RNA-sc-1884502</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717103</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#4" accession="ERX522622">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522622</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#4</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#4</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717104, constructed from sample accession ERS423639 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence TGACCA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423639" refname="T2_43_3_RNA-sc-1884503" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423639</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417178</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_43_3_RNA-sc-1884503</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717104</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#5" accession="ERX522623">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522623</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#5</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#5</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717105, constructed from sample accession ERS423640 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence ACAGTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423640" refname="T2_42_1_RNA-sc-1884504" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423640</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417179</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_42_1_RNA-sc-1884504</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717105</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#6" accession="ERX522624">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522624</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#6</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#6</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717106, constructed from sample accession ERS423641 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GCCAAT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423641" refname="T2_45_2_RNA-sc-1884505" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423641</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417180</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_45_2_RNA-sc-1884505</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717106</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#7" accession="ERX522625">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522625</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#7</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#7</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717107, constructed from sample accession ERS423642 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence CAGATC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423642" refname="T1_42_7_RNA-sc-1884506" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423642</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417181</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_42_7_RNA-sc-1884506</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717107</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#8" accession="ERX522626">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522626</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#8</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#8</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717108, constructed from sample accession ERS423643 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence ACTTGA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423643" refname="T2_47_4_RNA-sc-1884507" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423643</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417182</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_47_4_RNA-sc-1884507</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717108</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#9" accession="ERX522627">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522627</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#9</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#9</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717109, constructed from sample accession ERS423644 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GATCAG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423644" refname="T1_47_1_RNA-sc-1884508" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423644</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417183</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_47_1_RNA-sc-1884508</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717109</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#10" accession="ERX522628">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522628</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#10</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#10</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717110, constructed from sample accession ERS423645 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence TAGCTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423645" refname="T2_43_2_RNA-sc-1884509" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423645</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417184</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_43_2_RNA-sc-1884509</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717110</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#11" accession="ERX522629">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522629</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#11</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#11</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717111, constructed from sample accession ERS423646 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence GGCTAC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423646" refname="T2_46_6_RNA-sc-1884510" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423646</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417185</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_46_6_RNA-sc-1884510</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717111</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#12" accession="ERX522630">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522630</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#12</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#12</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717112, constructed from sample accession ERS423647 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence CTTGTA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423647" refname="T1_45_2_RNA-sc-1884511" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423647</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417186</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T1_45_2_RNA-sc-1884511</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717112</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT alias="SC_EXP_12603_2#13" accession="ERX522631">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX522631</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_12603_2#13</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_12603_2#13</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2500 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP003866" refname="Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003866</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Antigenic_variation_in_recrudescent_Plasmodium_chabaudi_infection-sc-2013-09-10T13:02:36Z-2759</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 9717113, constructed from sample accession ERS423648 for study accession ERP003866.  This is part of an Illumina multiplexed sequencing run (12603_2).  This submission includes reads tagged with the sequence AGTCAA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS423648" refname="T2_43_6_RNA-sc-1884512" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS423648</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2417187</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">T2_43_6_RNA-sc-1884512</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>9717113</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Illumina cDNA protocol</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
