<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="ena-EXPERIMENT-DUNDEE-13-08-2014-12:19:34:631-1" center_name="University of Dundee" accession="ERX537345">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX537345</PRIMARY_ID>
      <SUBMITTER_ID namespace="DUNDEE">ena-EXPERIMENT-DUNDEE-13-08-2014-12:19:34:631-1</SUBMITTER_ID>
      <SUBMITTER_ID namespace="University of Dundee">ena-EXPERIMENT-DUNDEE-13-08-2014-12:19:34:631-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF refname="ena-STUDY-DUNDEE-13-08-2014-12:19:37:460-305" refcenter="DUNDEE" accession="ERP006654">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP006654</PRIMARY_ID>
        <SUBMITTER_ID namespace="DUNDEE">ena-STUDY-DUNDEE-13-08-2014-12:19:37:460-305</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Genomic DNA extracted from tissue core sample.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR refname="SopPip1" refcenter="DUNDEE" accession="ERS526349">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS526349</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA2698472</EXTERNAL_ID>
          <SUBMITTER_ID namespace="DUNDEE">SopPip1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>SopPip_WGS</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="193"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>KAPA library preparation kit</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_LABEL>F1</READ_LABEL>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_LABEL>R2</READ_LABEL>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="0"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
