ERS6079609 SAMEA8394118 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394118 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1428_PA_P1_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-1428 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1428_PA_P1_1 sex male ERS6079610 SAMEA8394119 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394119 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1428_PA_P2_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-1428 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1428_PA_P2_1 sex male ERS6079611 SAMEA8394120 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394120 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1428_PA_P2_2 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-1428 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 2 sample name E-MTAB-10253:T-1428_PA_P2_2 sex male ERS6079612 SAMEA8394121 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394121 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1428_RD_P1_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-1428 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1428_RD_P1_1 sex male ERS6079613 SAMEA8394122 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394122 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1428_RD_P2_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-1428 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1428_RD_P2_1 sex male ERS6079614 SAMEA8394123 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394123 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1702_PA_P1_1 age 9 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-1702 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1702_PA_P1_1 sex female ERS6079615 SAMEA8394124 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394124 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1702_PA_P2_1 age 9 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-1702 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1702_PA_P2_1 sex female ERS6079616 SAMEA8394125 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394125 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1702_PA_P2_2 age 9 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-1702 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 2 sample name E-MTAB-10253:T-1702_PA_P2_2 sex female ERS6079617 SAMEA8394126 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394126 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1702_RD_P1_1 age 9 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-1702 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1702_RD_P1_1 sex female ERS6079618 SAMEA8394127 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394127 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-1702_RD_P2_1 age 9 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-1702 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-1702_RD_P2_1 sex female ERS6079619 SAMEA8394128 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394128 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2223_PA_P1_1 age 15 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-2223 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2223_PA_P1_1 sex male ERS6079620 SAMEA8394129 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394129 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2223_PA_P2_1 age 15 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2223 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2223_PA_P2_1 sex male ERS6079621 SAMEA8394130 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394130 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2223_PA_P2_2 age 15 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2223 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 2 sample name E-MTAB-10253:T-2223_PA_P2_2 sex male ERS6079622 SAMEA8394131 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394131 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2223_RD_P1_1 age 15 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-2223 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2223_RD_P1_1 sex male ERS6079623 SAMEA8394132 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394132 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2223_RD_P2_1 age 15 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2223 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2223_RD_P2_1 sex male ERS6079624 SAMEA8394133 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394133 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2301_PA_P1_1 age 3 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-2301 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2301_PA_P1_1 sex male ERS6079625 SAMEA8394134 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394134 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2301_PA_P2_1 age 3 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2301 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2301_PA_P2_1 sex male ERS6079626 SAMEA8394135 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394135 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2301_PA_P2_2 age 3 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2301 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 2 sample name E-MTAB-10253:T-2301_PA_P2_2 sex male ERS6079627 SAMEA8394136 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394136 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2301_RD_P1_1 age 3 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-2301 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2301_RD_P1_1 sex male ERS6079628 SAMEA8394137 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394137 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2301_RD_P2_1 age 3 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2301 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2301_RD_P2_1 sex male ERS6079629 SAMEA8394138 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394138 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2515_PA_P1_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-2515 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2515_PA_P1_1 sex male ERS6079630 SAMEA8394139 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394139 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2515_PA_P2_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2515 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2515_PA_P2_1 sex male ERS6079631 SAMEA8394140 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded mRNA and Total RNA Library Prep Kit. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2) ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394140 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2515_PA_P2_2 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2515 library protocol Illumina TruSeq Stranded mRNA organism part bone marrow replicate 2 sample name E-MTAB-10253:T-2515_PA_P2_2 sex male ERS6079632 SAMEA8394141 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Standard fragmentation conditions were used (94'C for 8 minutes; referred to as P1). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394141 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2515_RD_P1_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 94C for 8 minutes individual T-2515 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2515_RD_P1_1 sex male ERS6079633 SAMEA8394142 9606 Homo sapiens Protocols: T-cells (T-ALL and normal T lymphocytes) were obtained from bone marrow samples by isolation of mononuclear cells, using density gradient centrifugation, followed by immunomagnetic separation, with use of Human T Lymphocyte Enrichment Set-DM (Becton Dickinson). Total RNA was isolated using miRCURY RNA Isolation Kit Cell & Plant (Exiqon). RNA isolates were DNase treated and purified with use of RNA Clean and Concentrator Kit (Zymo Research). Libraries were generated with Illumina TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat. Modified fragmentation conditions were used (90'C for 2 minutes; referred to as P2). ENA first public 2021-06-30 ENA last update 2021-06-30 External Id SAMEA8394142 INSDC center alias Institute of Human Genetics Polish Academy of Sciences INSDC center name Institute of Human Genetics Polish Academy of Sciences INSDC first public 2021-06-30T00:26:53Z INSDC last update 2021-06-30T00:26:53Z INSDC status public Submitter Id E-MTAB-10253:T-2515_RD_P2_1 age 14 broker name ArrayExpress common name human developmental stage child disease childhood T acute lymphoblastic leukemia fragmentation protocol 90C for 2 minutes individual T-2515 library protocol TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat organism part bone marrow replicate 1 sample name E-MTAB-10253:T-2515_RD_P2_1 sex male