<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" center_name="The Wellcome Trust Sanger Institute" alias="SC_PacBio_EXP_m150703_090106_00127" accession="ERX1086474">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1086474</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_PacBio_EXP_m150703_090106_00127</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_PacBio_EXP_m150703_090106_00127</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>PacBio RS sequencing</TITLE>
    <STUDY_REF accession="ERP003770" refname="Discovery_of_natural_pneumococcal_mutation_rates_during_controlled_colonisation_of_the_human_nasopharynx-sc-2013-08-13T17:04:06Z-2690" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP003770</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">Discovery_of_natural_pneumococcal_mutation_rates_during_controlled_colonisation_of_the_human_nasopharynx-sc-2013-08-13T17:04:06Z-2690</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>PacBio sequencing of library 14221377, constructed from sample accession ERS743506 for study accession ERP003770.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS743506" refname="S__pneumoniae_23F_P833-sc-2310319" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS743506</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3444561</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">S__pneumoniae_23F_P833-sc-2310319</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>14221377</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL match_edge="full">ATCTCTCTCAACAACAACAACGGAGGAGGAGGAAAAGAGAGAGAT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <PACBIO_SMRT>
        <INSTRUMENT_MODEL>PacBio RS</INSTRUMENT_MODEL>
      </PACBIO_SMRT>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>BindingKit</TAG>
        <VALUE>100356300</VALUE>
      </EXPERIMENT_ATTRIBUTE>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>SequencingKit</TAG>
        <VALUE>100356200</VALUE>
      </EXPERIMENT_ATTRIBUTE>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>InstCtrlVer</TAG>
        <VALUE>2.3.0.0.140640</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
