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<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
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    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088142</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#1</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955552, constructed from sample accession ERS710307 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence ATCACGTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710307" refname="53827-sc-2281883" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710307</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356019</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">53827-sc-2281883</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955552</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#2" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088143">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088143</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#2</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955564, constructed from sample accession ERS710308 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence CGATGTTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710308" refname="53964-sc-2281884" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710308</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356020</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">53964-sc-2281884</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955564</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#3" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088144">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088144</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#3</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955576, constructed from sample accession ERS710309 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTAGGCAT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710309" refname="53995-sc-2281885" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710309</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356021</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">53995-sc-2281885</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955576</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#4" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088145">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088145</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#4</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#4</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955588, constructed from sample accession ERS710310 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TGACCACT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710310" refname="53997-sc-2281886" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710310</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356022</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">53997-sc-2281886</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955588</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#5" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088146">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088146</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#5</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#5</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955600, constructed from sample accession ERS710311 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence ACAGTGGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710311" refname="53998-sc-2281887" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710311</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356023</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">53998-sc-2281887</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955600</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#6" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088147">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088147</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#6</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#6</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955612, constructed from sample accession ERS710312 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence GCCAATGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710312" refname="54000-sc-2281888" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710312</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356024</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">54000-sc-2281888</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955612</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#7" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088148">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088148</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#7</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#7</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955624, constructed from sample accession ERS710313 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence CAGATCTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710313" refname="60998-sc-2281889" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710313</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356025</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">60998-sc-2281889</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955624</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#8" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088149">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088149</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#8</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#8</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955636, constructed from sample accession ERS710314 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence ACTTGATG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710314" refname="61012-sc-2281890" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710314</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356026</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61012-sc-2281890</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955636</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#9" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088150">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088150</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#9</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#9</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955553, constructed from sample accession ERS710315 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence GATCAGCG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710315" refname="61033-sc-2281891" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710315</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356027</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61033-sc-2281891</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955553</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#10" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088151">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088151</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#10</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#10</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955565, constructed from sample accession ERS710316 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TAGCTTGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710316" refname="61034-sc-2281892" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710316</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356028</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61034-sc-2281892</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955565</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#11" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088152">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088152</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#11</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#11</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955577, constructed from sample accession ERS710317 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence GGCTACAG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710317" refname="60903-sc-2281893" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710317</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356029</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">60903-sc-2281893</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955577</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#12" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088153">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088153</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#12</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#12</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955589, constructed from sample accession ERS710318 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence CTTGTACT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710318" refname="61015-sc-2281894" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710318</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356030</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61015-sc-2281894</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955589</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#13" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088154">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088154</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#13</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#13</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955601, constructed from sample accession ERS710319 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TGGTTGTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710319" refname="61017-sc-2281895" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710319</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356031</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61017-sc-2281895</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955601</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#14" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088155">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088155</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#14</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#14</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955613, constructed from sample accession ERS710320 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCTCGGTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710320" refname="61022-sc-2281896" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710320</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356032</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61022-sc-2281896</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955613</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#15" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088156">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088156</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#15</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#15</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955625, constructed from sample accession ERS710321 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TAAGCGTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710321" refname="61026-sc-2281897" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710321</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356033</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61026-sc-2281897</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955625</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#16" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088157">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088157</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#16</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#16</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955637, constructed from sample accession ERS710322 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCCGTCTT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710322" refname="61027-sc-2281898" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710322</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356034</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61027-sc-2281898</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955637</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#18" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088158">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088158</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#18</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#18</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955566, constructed from sample accession ERS710324 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTCTGTGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710324" refname="61046-sc-2281900" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710324</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356036</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61046-sc-2281900</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955566</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#19" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088159">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088159</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#19</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#19</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955578, constructed from sample accession ERS710325 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCTGCTGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710325" refname="61047-sc-2281901" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710325</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356037</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61047-sc-2281901</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955578</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#20" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088160">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088160</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#20</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#20</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955590, constructed from sample accession ERS710326 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTGGAGGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710326" refname="61050-sc-2281902" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710326</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356038</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">61050-sc-2281902</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955590</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#21" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088161">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088161</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#21</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#21</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955602, constructed from sample accession ERS710327 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCGAGCGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710327" refname="52147-sc-2281903" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710327</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356039</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">52147-sc-2281903</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955602</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#22" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088162">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088162</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#22</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#22</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955614, constructed from sample accession ERS710328 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TGATACGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710328" refname="52152-sc-2281904" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710328</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356040</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">52152-sc-2281904</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955614</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#23" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088163">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088163</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#23</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#23</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955626, constructed from sample accession ERS710329 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TGCATAGT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710329" refname="62861-sc-2281905" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710329</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356041</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62861-sc-2281905</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955626</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#24" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088164">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088164</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#24</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#24</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955638, constructed from sample accession ERS710330 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTGACTCT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710330" refname="62872-sc-2281906" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710330</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356042</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62872-sc-2281906</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955638</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#25" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088165">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088165</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#25</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#25</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955555, constructed from sample accession ERS710331 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TGCGATCT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710331" refname="62881-sc-2281907" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710331</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356043</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62881-sc-2281907</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955555</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#26" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088166">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088166</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#26</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#26</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955567, constructed from sample accession ERS710332 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTCCTGCT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710332" refname="62902-sc-2281908" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710332</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356044</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62902-sc-2281908</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955567</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#27" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088167">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088167</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#27</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#27</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955579, constructed from sample accession ERS710333 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TAGTGACT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710333" refname="62906-sc-2281909" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710333</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356045</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62906-sc-2281909</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955579</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#28" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088168">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088168</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#28</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#28</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955591, constructed from sample accession ERS710334 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TACAGGAT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710334" refname="62845-sc-2281910" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710334</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3443697</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62845-sc-2281910</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955591</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#29" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088169">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088169</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#29</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#29</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955603, constructed from sample accession ERS710335 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCCTCAAT.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710335" refname="62855-sc-2281911" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710335</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356046</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62855-sc-2281911</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955603</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#30" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088170">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088170</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#30</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#30</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955615, constructed from sample accession ERS710336 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TGTGGTTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710336" refname="62856-sc-2281912" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710336</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356047</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62856-sc-2281912</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955615</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#31" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088171">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088171</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#31</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#31</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955627, constructed from sample accession ERS710337 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TAGTCTTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710337" refname="62561-sc-2281913" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710337</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356048</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62561-sc-2281913</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955627</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#32" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088172">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088172</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#32</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#32</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955639, constructed from sample accession ERS710338 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTCCATTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710338" refname="62924-sc-2281914" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710338</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356049</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62924-sc-2281914</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955639</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#33" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088173">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088173</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#33</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#33</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955556, constructed from sample accession ERS710339 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCGAAGTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710339" refname="62926-sc-2281915" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710339</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356050</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62926-sc-2281915</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955556</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#34" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088174">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088174</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#34</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#34</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955568, constructed from sample accession ERS710340 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TAACGCTG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710340" refname="62931-sc-2281916" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710340</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356051</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62931-sc-2281916</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955568</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#35" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088175">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088175</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#35</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#35</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955580, constructed from sample accession ERS710341 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTGGTATG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710341" refname="62932-sc-2281917" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710341</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356052</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62932-sc-2281917</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955580</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#37" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088176">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088176</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#37</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#37</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955604, constructed from sample accession ERS710343 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TACTTCGG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710343" refname="62921-sc-2281919" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710343</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356054</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62921-sc-2281919</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955604</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#38" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088177">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088177</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#38</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#38</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955616, constructed from sample accession ERS710344 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCTCACGG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710344" refname="62935-sc-2281920" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710344</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356055</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62935-sc-2281920</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955616</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#39" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088178">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088178</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#39</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#39</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955628, constructed from sample accession ERS710345 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCAGGAGG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710345" refname="62586-sc-2281921" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710345</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356056</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">62586-sc-2281921</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955628</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#43" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088179">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088179</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#43</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#43</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955581, constructed from sample accession ERS710349 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TCATTGAG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710349" refname="63247-sc-2281925" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710349</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356060</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">63247-sc-2281925</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955581</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#45" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088180">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088180</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#45</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#45</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955605, constructed from sample accession ERS710351 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TATGCCAG.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710351" refname="63061-sc-2281927" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710351</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356062</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">63061-sc-2281927</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955605</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#49" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088181">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088181</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#49</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#49</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955558, constructed from sample accession ERS710355 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TGTCTATC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710355" refname="844939-sc-2281931" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710355</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356066</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">844939-sc-2281931</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955558</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" alias="SC_EXP_16703_8#51" center_name="The Wellcome Trust Sanger Institute" accession="ERX1088182">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1088182</PRIMARY_ID>
      <SUBMITTER_ID namespace="SC">SC_EXP_16703_8#51</SUBMITTER_ID>
      <SUBMITTER_ID namespace="The Wellcome Trust Sanger Institute">SC_EXP_16703_8#51</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 paired end sequencing</TITLE>
    <STUDY_REF accession="ERP010225" refname="The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626" refcenter="SC">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP010225</PRIMARY_ID>
        <SUBMITTER_ID namespace="SC">The_distribution_and_evolution_of_Shigella_sonnei_across_regional_Latin_America-sc-3626</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Illumina sequencing of library 13955582, constructed from sample accession ERS710357 for study accession ERP010225.  This is part of an Illumina multiplexed sequencing run (16703_8).  This submission includes reads tagged with the sequence TTACTCGC.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS710357" refname="844948-sc-2281933" refcenter="SC">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS710357</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA3356068</EXTERNAL_ID>
          <SUBMITTER_ID namespace="SC">844948-sc-2281933</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>13955582</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="468" NOMINAL_SDEV="85"/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Standard</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
