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        <TAG>Experimental Factor: 24</TAG>
        <VALUE>time</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT xmlns:com="SRA.common" center_name="RIKEN Yokohama Center for Sustainable Resource Science (CSRS) Gene Discovery Research Group Cell Function Research Team" alias="E-MTAB-4838:24_h_EtOH_b" broker_name="ArrayExpress" accession="ERX1534870">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1534870</PRIMARY_ID>
      <SUBMITTER_ID namespace="RIKEN Yokohama Center for Sustainable Resource Science (CSRS) Gene Discovery Research Group Cell Function Research Team">E-MTAB-4838:24_h_EtOH_b</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 sequencing; Transcript profiling of plants ectopically expressing DOF5.4 / OBF BINDING PROTEIN 4 (OBP4).</TITLE>
    <STUDY_REF accession="ERP016147">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP016147</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Transcript profiling of plants ectopically expressing DOF5.4 / OBF BINDING PROTEIN 4 (OBP4).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS1212417">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS1212417</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA4041307</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>24_h_EtOH_b</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>About 5 mm root tips of 7 day old plants were collected using a razor blade and flash frozen in liquid nitrogen. Plants were grown on plates containing Murashige and Skoog (MS) salts, 1% sucrose (w/v), and 0.6% phytagel (w/v) at 22°C under the photoperiod of 16 h light and 8 h dark. RNA was extracted using the plant RNeasy kit (Qiagen) according to the manufacturers guidelines RNA samples were reverse transcribed and their libraries were constructed with the TruSeq kit (Illumina) according to manufacturers instructions</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: 24 h ethanol</TAG>
        <VALUE>growth condition</VALUE>
      </EXPERIMENT_ATTRIBUTE>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: 24</TAG>
        <VALUE>time</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT xmlns:com="SRA.common" center_name="RIKEN Yokohama Center for Sustainable Resource Science (CSRS) Gene Discovery Research Group Cell Function Research Team" alias="E-MTAB-4838:24_h_EtOH_c" broker_name="ArrayExpress" accession="ERX1534871">
    <IDENTIFIERS>
      <PRIMARY_ID>ERX1534871</PRIMARY_ID>
      <SUBMITTER_ID namespace="RIKEN Yokohama Center for Sustainable Resource Science (CSRS) Gene Discovery Research Group Cell Function Research Team">E-MTAB-4838:24_h_EtOH_c</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina HiSeq 2000 sequencing; Transcript profiling of plants ectopically expressing DOF5.4 / OBF BINDING PROTEIN 4 (OBP4).</TITLE>
    <STUDY_REF accession="ERP016147">
      <IDENTIFIERS>
        <PRIMARY_ID>ERP016147</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Transcript profiling of plants ectopically expressing DOF5.4 / OBF BINDING PROTEIN 4 (OBP4).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="ERS1212418">
        <IDENTIFIERS>
          <PRIMARY_ID>ERS1212418</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA4041308</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>24_h_EtOH_c</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>About 5 mm root tips of 7 day old plants were collected using a razor blade and flash frozen in liquid nitrogen. Plants were grown on plates containing Murashige and Skoog (MS) salts, 1% sucrose (w/v), and 0.6% phytagel (w/v) at 22°C under the photoperiod of 16 h light and 8 h dark. RNA was extracted using the plant RNeasy kit (Qiagen) according to the manufacturers guidelines RNA samples were reverse transcribed and their libraries were constructed with the TruSeq kit (Illumina) according to manufacturers instructions</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: 24 h ethanol</TAG>
        <VALUE>growth condition</VALUE>
      </EXPERIMENT_ATTRIBUTE>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: 24</TAG>
        <VALUE>time</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
