ERS7693857 SAMEA10015630 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015630 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL09522 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Sligo host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL09522 virus identifier hCoV-19/Ireland/SO-NVRL-M37IRL09522/2021 ERS7693858 SAMEA10015631 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015631 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17509 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17509 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL17509/2021 ERS7693859 SAMEA10015632 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015632 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL16134 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16134 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16134/2021 ERS7693860 SAMEA10015633 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015633 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL16485 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16485 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16485/2021 ERS7693861 SAMEA10015634 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015634 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL55421 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Waterford host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL55421 virus identifier hCoV-19/Ireland/WD-NVRL-M37IRL55421/2021 ERS7693862 SAMEA10015635 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015635 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL11719 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL11719 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL11719/2021 ERS7693863 SAMEA10015636 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015636 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14357 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14357 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL14357/2021 ERS7693864 SAMEA10015637 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015637 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL53512 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL53512 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL53512/2021 ERS7693865 SAMEA10015638 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015638 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL20576 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 85+ host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL20576 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL20576/2021 ERS7693866 SAMEA10015639 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015639 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL16155 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16155 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16155/2021 ERS7693867 SAMEA10015640 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015640 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL13474 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL13474 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL13474/2021 ERS7693868 SAMEA10015641 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015641 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL49972 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Waterford host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL49972 virus identifier hCoV-19/Ireland/WD-NVRL-M37IRL49972/2021 ERS7693869 SAMEA10015642 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015642 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL12606 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12606 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12606/2021 ERS7693870 SAMEA10015643 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015643 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL40171 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL40171 virus identifier hCoV-19/Ireland/TA-NVRL-M37IRL40171/2021 ERS7693871 SAMEA10015644 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015644 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14343 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kilkenny host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14343 virus identifier hCoV-19/Ireland/KK-NVRL-M37IRL14343/2021 ERS7693872 SAMEA10015645 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015645 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL57366 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL57366 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL57366/2021 ERS7693873 SAMEA10015646 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015646 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14109 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 71-80 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14109 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL14109/2021 ERS7693874 SAMEA10015647 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015647 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL49977 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Waterford host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL49977 virus identifier hCoV-19/Ireland/WD-NVRL-M37IRL49977/2021 ERS7693875 SAMEA10015648 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015648 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL16452 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16452 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16452/2021 ERS7693876 SAMEA10015649 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015649 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL16340 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16340 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16340/2021 ERS7693877 SAMEA10015650 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015650 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL53521 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL53521 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL53521/2021 ERS7693878 SAMEA10015651 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015651 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL16351 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16351 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16351/2021 ERS7693879 SAMEA10015652 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015652 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL16307 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16307 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16307/2021 ERS7693880 SAMEA10015653 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015653 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL10466 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL10466 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL10466/2021 ERS7693881 SAMEA10015654 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015654 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL10326 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL10326 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL10326/2021 ERS7693882 SAMEA10015655 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015655 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL09169 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL09169 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL09169/2021 ERS7693883 SAMEA10015656 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015656 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL13685 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Carlow host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL13685 virus identifier hCoV-19/Ireland/CW-NVRL-M37IRL13685/2021 ERS7693884 SAMEA10015657 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015657 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46165 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46165 virus identifier hCoV-19/Ireland/LS-NVRL-M37IRL46165/2021 ERS7693885 SAMEA10015658 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015658 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17634 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17634 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL17634/2021 ERS7693886 SAMEA10015659 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015659 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17187 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17187 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL17187/2021 ERS7693887 SAMEA10015660 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015660 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46139 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46139 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL46139/2021 ERS7693888 SAMEA10015661 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015661 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46406 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Limerick host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46406 virus identifier hCoV-19/Ireland/LK-NVRL-M37IRL46406/2021 ERS7693889 SAMEA10015662 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015662 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL19588 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19588 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL19588/2021 ERS7693890 SAMEA10015663 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015663 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL96342 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL96342 virus identifier hCoV-19/Ireland/CO-NVRL-M36IRL96342/2021 ERS7693891 SAMEA10015664 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015664 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46754 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Clare host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46754 virus identifier hCoV-19/Ireland/CE-NVRL-M37IRL46754/2021 ERS7693892 SAMEA10015665 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015665 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL20420 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL20420 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL20420/2021 ERS7693893 SAMEA10015666 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015666 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL20688 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL20688 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL20688/2021 ERS7693894 SAMEA10015667 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015667 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46891 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46891 virus identifier hCoV-19/Ireland/TA-NVRL-M37IRL46891/2021 ERS7693895 SAMEA10015668 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015668 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL20446 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL20446 virus identifier hCoV-19/Ireland/TA-NVRL-M37IRL20446/2021 ERS7693896 SAMEA10015669 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015669 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL40497 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL40497 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL40497/2021 ERS7693897 SAMEA10015670 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015670 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14598 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14598 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14598/2021 ERS7693898 SAMEA10015671 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015671 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL20794 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL20794 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL20794/2021 ERS7693899 SAMEA10015672 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015672 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL51275 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51275 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51275/2021 ERS7693900 SAMEA10015673 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015673 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL12155 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12155 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12155/2021 ERS7693901 SAMEA10015674 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015674 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17652 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17652 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL17652/2021 ERS7693902 SAMEA10015675 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015675 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17239 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17239 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL17239/2021 ERS7693903 SAMEA10015676 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015676 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17379 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17379 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL17379/2021 ERS7693904 SAMEA10015677 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015677 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL19135 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19135 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL19135/2021 ERS7693905 SAMEA10015678 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015678 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL19590 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19590 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL19590/2021 ERS7693906 SAMEA10015679 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015679 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14743 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14743 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14743/2021 ERS7693907 SAMEA10015680 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015680 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46132 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46132 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL46132/2021 ERS7693908 SAMEA10015681 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015681 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL18645 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL18645 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL18645/2021 ERS7693909 SAMEA10015682 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015682 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL95440 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL95440 virus identifier hCoV-19/Ireland/CO-NVRL-M36IRL95440/2021 ERS7693910 SAMEA10015683 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015683 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL18827 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Offaly host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL18827 virus identifier hCoV-19/Ireland/OY-NVRL-M37IRL18827/2021 ERS7693911 SAMEA10015684 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015684 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL15194 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Wicklow host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL15194 virus identifier hCoV-19/Ireland/WW-NVRL-M37IRL15194/2021 ERS7693912 SAMEA10015685 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015685 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL18522 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Offaly host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL18522 virus identifier hCoV-19/Ireland/OY-NVRL-M37IRL18522/2021 ERS7693913 SAMEA10015686 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015686 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14539 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14539 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14539/2021 ERS7693914 SAMEA10015687 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015687 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL20401 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL20401 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL20401/2021 ERS7693915 SAMEA10015688 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015688 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL14897 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14897 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14897/2021 ERS7693916 SAMEA10015689 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015689 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL17233 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17233 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL17233/2021 ERS7693917 SAMEA10015690 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015690 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL96115 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL96115 virus identifier hCoV-19/Ireland/DL-NVRL-M36IRL96115/2021 ERS7693918 SAMEA10015691 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015691 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL18653 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL18653 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL18653/2021 ERS7693919 SAMEA10015692 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015692 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL39293 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL39293 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL39293/2021 ERS7693920 SAMEA10015693 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA-FIRST-PUBLIC 2021-10-15T12:20:55Z ENA-LAST-UPDATE 2021-10-15T12:20:55Z External Id SAMEA10015693 INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL19578 broker name Irish Consortium for Sequencing Covid collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 71-80 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19578 scientific_name Severe acute respiratory syndrome coronavirus 2 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL19578/2021 ERS7693921 SAMEA10015694 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015694 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL98296 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL98296 virus identifier hCoV-19/Ireland/DL-NVRL-M36IRL98296/2021 ERS7693922 SAMEA10015695 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015695 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL46219 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Limerick host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46219 virus identifier hCoV-19/Ireland/LK-NVRL-M37IRL46219/2021 ERS7693923 SAMEA10015696 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015696 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL96517 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL96517 virus identifier hCoV-19/Ireland/CO-NVRL-M36IRL96517/2021 ERS7693924 SAMEA10015697 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015697 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL96109 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL96109 virus identifier hCoV-19/Ireland/DL-NVRL-M36IRL96109/2021 ERS7693925 SAMEA10015698 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015698 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL15936 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL15936 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL15936/2021 ERS7693926 SAMEA10015699 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015699 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL12250 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12250 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12250/2021 ERS7693927 SAMEA10015700 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015700 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL03107 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03107 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03107/2021 ERS7693928 SAMEA10015701 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015701 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL00693 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL00693 virus identifier hCoV-19/Ireland/TA-NVRL-M37IRL00693/2021 ERS7693929 SAMEA10015702 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015702 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL29319 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29319 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29319/2021 ERS7693930 SAMEA10015703 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015703 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL98904 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL98904 virus identifier hCoV-19/Ireland/LS-NVRL-M36IRL98904/2021 ERS7693931 SAMEA10015704 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015704 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL03047 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03047 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03047/2021 ERS7693932 SAMEA10015705 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015705 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL02757 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02757 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02757/2021 ERS7693933 SAMEA10015706 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015706 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL03524 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03524 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL03524/2021 ERS7693934 SAMEA10015707 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015707 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL02929 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02929 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02929/2021 ERS7693935 SAMEA10015708 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015708 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL02917 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02917 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02917/2021 ERS7693936 SAMEA10015709 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015709 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL02699 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02699 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02699/2021 ERS7693937 SAMEA10015710 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015710 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL03275 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03275 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03275/2021 ERS7693938 SAMEA10015711 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015711 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL02943 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02943 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02943/2021 ERS7693939 SAMEA10015712 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015712 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL03270 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03270 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03270/2021 ERS7693940 SAMEA10015713 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015713 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL01191 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Limerick host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL01191 virus identifier hCoV-19/Ireland/LK-NVRL-M37IRL01191/2021 ERS7693941 SAMEA10015714 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015714 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL03009 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03009 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03009/2021 ERS7693942 SAMEA10015715 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015715 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL97274 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL97274 virus identifier hCoV-19/Ireland/MH-NVRL-M36IRL97274/2021 ERS7693943 SAMEA10015716 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015716 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL01679 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL01679 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL01679/2021 ERS7693944 SAMEA10015717 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015717 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL03266 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03266 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03266/2021 ERS7693945 SAMEA10015718 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015718 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL29430 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29430 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29430/2021 ERS7693946 SAMEA10015719 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015719 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL51549 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51549 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51549/2021 ERS7693947 SAMEA10015720 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015720 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL37077 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL37077 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL37077/2021 ERS7693948 SAMEA10015721 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015721 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL29593 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29593 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL29593/2021 ERS7693949 SAMEA10015722 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015722 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL51349 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51349 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51349/2021 ERS7693950 SAMEA10015723 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015723 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL34203 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL34203 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL34203/2021 ERS7693951 SAMEA10015724 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015724 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL38026 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38026 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL38026/2021 ERS7693952 SAMEA10015725 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015725 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL47397 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL47397 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL47397/2021 ERS7693953 SAMEA10015726 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015726 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL51553 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51553 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51553/2021 ERS7693954 SAMEA10015727 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015727 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL38015 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38015 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL38015/2021 ERS7693955 SAMEA10015728 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015728 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL46516 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Offaly host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46516 virus identifier hCoV-19/Ireland/OY-NVRL-M37IRL46516/2021 ERS7693956 SAMEA10015729 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015729 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL49533 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Waterford host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL49533 virus identifier hCoV-19/Ireland/WD-NVRL-M37IRL49533/2021 ERS7693957 SAMEA10015730 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015730 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL05390 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL05390 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL05390/2021 ERS7693958 SAMEA10015731 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015731 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL50154 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL50154 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL50154/2021 ERS7693959 SAMEA10015732 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015732 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL47301 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL47301 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL47301/2021 ERS7693960 SAMEA10015733 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015733 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL95845 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL95845 virus identifier hCoV-19/Ireland/TA-NVRL-M36IRL95845/2021 ERS7693961 SAMEA10015734 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015734 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL29427 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29427 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29427/2021 ERS7693962 SAMEA10015735 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015735 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL36578 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL36578 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL36578/2021 ERS7693963 SAMEA10015736 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015736 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL37061 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL37061 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL37061/2021 ERS7693964 SAMEA10015737 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015737 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL29438 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29438 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29438/2021 ERS7693965 SAMEA10015738 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015738 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL34210 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL34210 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL34210/2021 ERS7693966 SAMEA10015739 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015739 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL29987 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29987 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL29987/2021 ERS7693967 SAMEA10015740 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015740 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL34191 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL34191 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL34191/2021 ERS7693968 SAMEA10015741 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015741 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL27564 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL27564 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL27564/2021 ERS7693969 SAMEA10015742 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015742 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL05287 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Sligo host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL05287 virus identifier hCoV-19/Ireland/SO-NVRL-M37IRL05287/2021 ERS7693970 SAMEA10015743 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015743 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL41979 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL41979 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL41979/2021 ERS7693971 SAMEA10015744 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015744 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL41256 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL41256 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL41256/2021 ERS7693972 SAMEA10015745 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015745 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL91033 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL91033 virus identifier hCoV-19/Ireland/MH-NVRL-M36IRL91033/2021 ERS7693973 SAMEA10015746 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015746 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL41417 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL41417 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL41417/2021 ERS7693974 SAMEA10015747 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015747 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL06051 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL06051 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL06051/2021 ERS7693975 SAMEA10015748 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015748 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL49323 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL49323 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL49323/2021 ERS7693976 SAMEA10015749 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015749 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL47326 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL47326 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL47326/2021 ERS7693977 SAMEA10015750 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015750 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL28852 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL28852 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL28852/2021 ERS7693978 SAMEA10015751 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015751 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL52743 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL52743 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL52743/2021 ERS7693979 SAMEA10015752 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015752 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL33079 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL33079 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL33079/2021 ERS7693980 SAMEA10015753 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015753 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL52768 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL52768 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL52768/2021 ERS7693981 SAMEA10015754 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015754 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL51501 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51501 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51501/2021 ERS7693982 SAMEA10015755 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015755 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL49471 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Waterford host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL49471 virus identifier hCoV-19/Ireland/WD-NVRL-M37IRL49471/2021 ERS7693983 SAMEA10015756 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015756 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL40203 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL40203 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL40203/2021 ERS7693984 SAMEA10015757 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015757 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL32899 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL32899 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL32899/2021 ERS7693985 SAMEA10015758 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015758 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL40221 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL40221 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL40221/2021 ERS7693986 SAMEA10015759 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015759 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL47386 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL47386 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL47386/2021 ERS7693987 SAMEA10015760 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015760 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL92234 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kildare host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL92234 virus identifier hCoV-19/Ireland/KE-NVRL-M36IRL92234/2021 ERS7693988 SAMEA10015761 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015761 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL96583 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Monaghan host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL96583 virus identifier hCoV-19/Ireland/MN-NVRL-M36IRL96583/2021 ERS7693989 SAMEA10015762 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015762 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL04728 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL04728 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL04728/2021 ERS7693990 SAMEA10015763 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015763 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL93012 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL93012 virus identifier hCoV-19/Ireland/D-NVRL-M36IRL93012/2021 ERS7693991 SAMEA10015764 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015764 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL50155 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL50155 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL50155/2021 ERS7693992 SAMEA10015765 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015765 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL94612 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL94612 virus identifier hCoV-19/Ireland/TA-NVRL-M36IRL94612/2021 ERS7693993 SAMEA10015766 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015766 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL05882 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL05882 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL05882/2021 ERS7693994 SAMEA10015767 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015767 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL91830 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL91830 virus identifier hCoV-19/Ireland/LS-NVRL-M36IRL91830/2021 ERS7693995 SAMEA10015768 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015768 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL92646 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL92646 virus identifier hCoV-19/Ireland/MH-NVRL-M36IRL92646/2021 ERS7693996 SAMEA10015769 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015769 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL93049 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL93049 virus identifier hCoV-19/Ireland/D-NVRL-M36IRL93049/2021 ERS7693997 SAMEA10015770 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015770 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL38433 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38433 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL38433/2021 ERS7693998 SAMEA10015771 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015771 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46115 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46115 virus identifier hCoV-19/Ireland/LS-NVRL-M37IRL46115/2021 ERS7693999 SAMEA10015772 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015772 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL93042 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL93042 virus identifier hCoV-19/Ireland/D-NVRL-M36IRL93042/2021 ERS7694000 SAMEA10015773 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015773 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL50220 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL50220 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL50220/2021 ERS7694001 SAMEA10015774 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015774 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL45752 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Limerick host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL45752 virus identifier hCoV-19/Ireland/LK-NVRL-M37IRL45752/2021 ERS7694002 SAMEA10015775 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015775 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46517 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Offaly host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46517 virus identifier hCoV-19/Ireland/OY-NVRL-M37IRL46517/2021 ERS7694003 SAMEA10015776 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015776 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL47051 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL47051 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL47051/2021 ERS7694004 SAMEA10015777 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015777 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL53468 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL53468 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL53468/2021 ERS7694005 SAMEA10015778 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015778 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL40233 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL40233 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL40233/2021 ERS7694006 SAMEA10015779 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015779 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL24715 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL24715 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL24715/2021 ERS7694007 SAMEA10015780 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015780 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL52492 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL52492 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL52492/2021 ERS7694008 SAMEA10015781 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015781 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL51177 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kildare host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51177 virus identifier hCoV-19/Ireland/KE-NVRL-M37IRL51177/2021 ERS7694009 SAMEA10015782 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015782 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL46290 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46290 virus identifier hCoV-19/Ireland/LS-NVRL-M37IRL46290/2021 ERS7694010 SAMEA10015783 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015783 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL38175 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Limerick host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38175 virus identifier hCoV-19/Ireland/LK-NVRL-M37IRL38175/2021 ERS7694011 SAMEA10015784 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015784 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14462 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14462 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14462/2021 ERS7694012 SAMEA10015785 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015785 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14557 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14557 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14557/2021 ERS7694013 SAMEA10015786 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015786 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL12003 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12003 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12003/2021 ERS7694014 SAMEA10015787 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015787 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL94580 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL94580 virus identifier hCoV-19/Ireland/TA-NVRL-M36IRL94580/2021 ERS7694015 SAMEA10015788 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015788 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17685 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17685 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL17685/2021 ERS7694016 SAMEA10015789 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015789 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL70040 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-01 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL70040 virus identifier hCoV-19/Ireland/G-NVRL-M36IRL70040/2021 ERS7694017 SAMEA10015790 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015790 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL92698 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL92698 virus identifier hCoV-19/Ireland/D-NVRL-M36IRL92698/2021 ERS7694018 SAMEA10015791 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA-FIRST-PUBLIC 2021-10-15T12:20:56Z ENA-LAST-UPDATE 2021-10-15T12:20:56Z External Id SAMEA10015791 INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL12592 broker name Irish Consortium for Sequencing Covid collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12592 scientific_name Severe acute respiratory syndrome coronavirus 2 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12592/2021 ERS7694019 SAMEA10015792 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015792 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL19532 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19532 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL19532/2021 ERS7694020 SAMEA10015793 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015793 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL51564 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51564 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51564/2021 ERS7694021 SAMEA10015794 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015794 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL14521 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14521 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14521/2021 ERS7694022 SAMEA10015795 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015795 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL51281 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51281 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51281/2021 ERS7694023 SAMEA10015796 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015796 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL49480 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Waterford host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL49480 virus identifier hCoV-19/Ireland/WD-NVRL-M37IRL49480/2021 ERS7694024 SAMEA10015797 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015797 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL15754 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL15754 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL15754/2021 ERS7694025 SAMEA10015798 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015798 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL12619 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12619 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12619/2021 ERS7694026 SAMEA10015799 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015799 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL17805 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17805 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL17805/2021 ERS7694027 SAMEA10015800 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015800 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL12247 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12247 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12247/2021 ERS7694028 SAMEA10015801 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015801 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02695 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02695 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02695/2021 ERS7694029 SAMEA10015802 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015802 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02675 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02675 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02675/2021 ERS7694030 SAMEA10015803 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015803 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL98826 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL98826 virus identifier hCoV-19/Ireland/LS-NVRL-M36IRL98826/2021 ERS7694031 SAMEA10015804 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015804 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL98733 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL98733 virus identifier hCoV-19/Ireland/LS-NVRL-M36IRL98733/2021 ERS7694032 SAMEA10015805 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015805 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL29053 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29053 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29053/2021 ERS7694033 SAMEA10015806 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015806 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02873 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02873 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02873/2021 ERS7694034 SAMEA10015807 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015807 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL03941 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 71-80 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03941 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03941/2021 ERS7694035 SAMEA10015808 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015808 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02994 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02994 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02994/2021 ERS7694036 SAMEA10015809 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015809 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL98884 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL98884 virus identifier hCoV-19/Ireland/LS-NVRL-M36IRL98884/2021 ERS7694037 SAMEA10015810 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015810 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL30702 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL30702 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL30702/2021 ERS7694038 SAMEA10015811 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015811 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL03937 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03937 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03937/2021 ERS7694039 SAMEA10015812 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015812 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL97602 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL97602 virus identifier hCoV-19/Ireland/WH-NVRL-M36IRL97602/2021 ERS7694040 SAMEA10015813 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015813 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL98556 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Offaly host age 71-80 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL98556 virus identifier hCoV-19/Ireland/OY-NVRL-M36IRL98556/2021 ERS7694041 SAMEA10015814 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015814 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL03287 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03287 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03287/2021 ERS7694042 SAMEA10015815 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015815 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL27208 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL27208 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL27208/2021 ERS7694043 SAMEA10015816 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015816 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL29360 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29360 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29360/2021 ERS7694044 SAMEA10015817 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015817 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL01157 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL01157 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL01157/2021 ERS7694045 SAMEA10015818 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015818 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL97521 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL97521 virus identifier hCoV-19/Ireland/LD-NVRL-M36IRL97521/2021 ERS7694046 SAMEA10015819 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015819 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02793 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02793 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02793/2021 ERS7694047 SAMEA10015820 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015820 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL03205 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL03205 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL03205/2021 ERS7694048 SAMEA10015821 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015821 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02877 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02877 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02877/2021 ERS7694049 SAMEA10015822 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015822 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M36IRL98856 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL98856 virus identifier hCoV-19/Ireland/LS-NVRL-M36IRL98856/2021 ERS7694050 SAMEA10015823 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015823 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02962 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02962 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02962/2021 ERS7694051 SAMEA10015824 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015824 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02668 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02668 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02668/2021 ERS7694052 SAMEA10015825 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015825 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL02890 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL02890 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL02890/2021 ERS7694053 SAMEA10015826 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015826 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL01340 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Limerick host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL01340 virus identifier hCoV-19/Ireland/LK-NVRL-M37IRL01340/2021 ERS7694054 SAMEA10015827 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015827 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL29395 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29395 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29395/2021 ERS7694055 SAMEA10015828 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015828 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL22565 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL22565 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL22565/2021 ERS7694056 SAMEA10015829 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015829 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL21765 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL21765 virus identifier hCoV-19/Ireland/LS-NVRL-M37IRL21765/2021 ERS7694057 SAMEA10015830 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015830 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:56Z INSDC last update 2021-10-15T12:20:56Z INSDC status public Submitter Id M37IRL33417 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Sligo host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL33417 virus identifier hCoV-19/Ireland/SO-NVRL-M37IRL33417/2021 ERS7694058 SAMEA10015831 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015831 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL29354 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL29354 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL29354/2021 ERS7694059 SAMEA10015832 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015832 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL09317 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Sligo host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL09317 virus identifier hCoV-19/Ireland/SO-NVRL-M37IRL09317/2021 ERS7694060 SAMEA10015833 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015833 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL54014 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL54014 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL54014/2021 ERS7694061 SAMEA10015834 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015834 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL19487 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Carlow host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19487 virus identifier hCoV-19/Ireland/CW-NVRL-M37IRL19487/2021 ERS7694062 SAMEA10015835 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015835 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL58774 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL58774 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL58774/2021 ERS7694063 SAMEA10015836 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015836 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL13876 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL13876 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL13876/2021 ERS7694064 SAMEA10015837 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015837 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL17517 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17517 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL17517/2021 ERS7694065 SAMEA10015838 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015838 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL09141 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Kerry host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL09141 virus identifier hCoV-19/Ireland/KY-NVRL-M37IRL09141/2021 ERS7694066 SAMEA10015839 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015839 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL19409 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Carlow host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19409 virus identifier hCoV-19/Ireland/CW-NVRL-M37IRL19409/2021 ERS7694067 SAMEA10015840 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015840 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL16453 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 71-80 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16453 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16453/2021 ERS7694068 SAMEA10015841 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015841 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL16360 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL16360 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL16360/2021 ERS7694069 SAMEA10015842 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015842 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL19628 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19628 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL19628/2021 ERS7694070 SAMEA10015843 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015843 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL14556 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14556 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14556/2021 ERS7694071 SAMEA10015844 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015844 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL17659 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17659 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL17659/2021 ERS7694072 SAMEA10015845 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015845 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL14627 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14627 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14627/2021 ERS7694073 SAMEA10015846 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015846 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL50725 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL50725 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL50725/2021 ERS7694074 SAMEA10015847 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015847 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL54028 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL54028 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL54028/2021 ERS7694075 SAMEA10015848 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015848 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL56546 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL56546 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL56546/2021 ERS7694076 SAMEA10015849 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015849 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL09101 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL09101 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL09101/2021 ERS7694077 SAMEA10015850 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015850 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL50158 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL50158 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL50158/2021 ERS7694078 SAMEA10015851 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015851 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL10303 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-04 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL10303 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL10303/2021 ERS7694079 SAMEA10015852 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015852 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL46383 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Laois host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL46383 virus identifier hCoV-19/Ireland/LS-NVRL-M37IRL46383/2021 ERS7694080 SAMEA10015853 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015853 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL38950 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38950 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL38950/2021 ERS7694081 SAMEA10015854 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015854 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL38526 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38526 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL38526/2021 ERS7694082 SAMEA10015855 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015855 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL38943 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38943 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL38943/2021 ERS7694083 SAMEA10015856 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015856 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL01367 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL01367 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL01367/2021 ERS7694084 SAMEA10015857 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015857 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL38641 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38641 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL38641/2021 ERS7694085 SAMEA10015858 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015858 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL36266 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL36266 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL36266/2021 ERS7694086 SAMEA10015859 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015859 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL41886 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 61-70 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL41886 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL41886/2021 ERS7694087 SAMEA10015860 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015860 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL52655 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL52655 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL52655/2021 ERS7694088 SAMEA10015861 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015861 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL37458 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL37458 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL37458/2021 ERS7694089 SAMEA10015862 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015862 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL51280 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51280 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51280/2021 ERS7694090 SAMEA10015863 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015863 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL12613 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Meath host age 11-20 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL12613 virus identifier hCoV-19/Ireland/MH-NVRL-M37IRL12613/2021 ERS7694091 SAMEA10015864 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015864 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL19141 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19141 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL19141/2021 ERS7694092 SAMEA10015865 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015865 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL20040 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Carlow host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL20040 virus identifier hCoV-19/Ireland/CW-NVRL-M37IRL20040/2021 ERS7694093 SAMEA10015866 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015866 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL18408 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Westmeath host age 71-80 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL18408 virus identifier hCoV-19/Ireland/WH-NVRL-M37IRL18408/2021 ERS7694094 SAMEA10015867 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015867 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL19139 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19139 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL19139/2021 ERS7694095 SAMEA10015868 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015868 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL19644 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL19644 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL19644/2021 ERS7694096 SAMEA10015869 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015869 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL52661 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL52661 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL52661/2021 ERS7694097 SAMEA10015870 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015870 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL14554 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL14554 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL14554/2021 ERS7694098 SAMEA10015871 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015871 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL51565 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL51565 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL51565/2021 ERS7694099 SAMEA10015872 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015872 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL38612 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Limerick host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL38612 virus identifier hCoV-19/Ireland/LK-NVRL-M37IRL38612/2021 ERS7694100 SAMEA10015873 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015873 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL47394 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-08 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Galway host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL47394 virus identifier hCoV-19/Ireland/G-NVRL-M37IRL47394/2021 ERS7694101 SAMEA10015874 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015874 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL36190 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL36190 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL36190/2021 ERS7694102 SAMEA10015875 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015875 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL27042 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Offaly host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL27042 virus identifier hCoV-19/Ireland/OY-NVRL-M37IRL27042/2021 ERS7694103 SAMEA10015876 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015876 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL27036 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Offaly host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL27036 virus identifier hCoV-19/Ireland/OY-NVRL-M37IRL27036/2021 ERS7694104 SAMEA10015877 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015877 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL22718 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-06 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Longford host age 71-80 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL22718 virus identifier hCoV-19/Ireland/LD-NVRL-M37IRL22718/2021 ERS7694105 SAMEA10015878 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015878 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL17522 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-05 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL17522 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL17522/2021 ERS7694106 SAMEA10015879 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015879 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL45153 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL45153 virus identifier hCoV-19/Ireland/TA-NVRL-M37IRL45153/2021 ERS7694107 SAMEA10015880 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015880 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL43049 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL43049 virus identifier hCoV-19/Ireland/D-NVRL-M37IRL43049/2021 ERS7694108 SAMEA10015881 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015881 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL06822 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL06822 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL06822/2021 ERS7694109 SAMEA10015882 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015882 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL41225 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 51-60 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL41225 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL41225/2021 ERS7694110 SAMEA10015883 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015883 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL05854 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Roscommon host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL05854 virus identifier hCoV-19/Ireland/RN-NVRL-M37IRL05854/2021 ERS7694111 SAMEA10015884 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015884 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL94590 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Tipperary host age 41-50 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL94590 virus identifier hCoV-19/Ireland/TA-NVRL-M36IRL94590/2021 ERS7694112 SAMEA10015885 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015885 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL92008 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 31-40 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL92008 virus identifier hCoV-19/Ireland/D-NVRL-M36IRL92008/2021 ERS7694113 SAMEA10015886 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015886 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL92159 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL92159 virus identifier hCoV-19/Ireland/D-NVRL-M36IRL92159/2021 ERS7694114 SAMEA10015887 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015887 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M36IRL93172 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-02 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Dublin host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex female host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M36IRL93172 virus identifier hCoV-19/Ireland/D-NVRL-M36IRL93172/2021 ERS7694115 SAMEA10015888 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015888 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL39199 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Cork host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL39199 virus identifier hCoV-19/Ireland/CO-NVRL-M37IRL39199/2021 ERS7694116 SAMEA10015889 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015889 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL41421 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-07 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Donegal host age 21-30 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL41421 virus identifier hCoV-19/Ireland/DL-NVRL-M37IRL41421/2021 ERS7694117 SAMEA10015890 2697049 Severe acute respiratory syndrome coronavirus 2 hCov-19 Oxford Nanopore MinION reads obtained following the Artic v3 protocol ENA first public 2021-10-15 ENA last update 2021-10-15 External Id SAMEA10015890 INSDC center alias NVRL INSDC center name NVRL INSDC first public 2021-10-15T12:20:55Z INSDC last update 2021-10-15T12:20:55Z INSDC status public Submitter Id M37IRL05305 broker name Interinstitutional project for the sequencing of circulating SARS-CoV-2 strains in the population of the Republic of Ireland during the 2020 pandemic of COVID19 collecting institution National Virus Reference Laboratory collection date 2021-09-03 collector name not provided common name Human coronavirus 2019 geographic location (country and/or sea) Ireland geographic location (latitude) 53.1424 geographic location (longitude) 7.6921 geographic location (region and locality) Europe / Ireland / Sligo host age 0-100 host common name human host health state not provided host scientific name Homo sapiens host sex male host subject id not provided isolation source host associated Oro-Nasopharyngeal swab sample capture status active surveillance in response to outbreak sample name M37IRL05305 virus identifier hCoV-19/Ireland/SO-NVRL-M37IRL05305/2021