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      <SUBMITTER_ID namespace="Medizinische Klinik I Universitatsklinikum Erlangen">E-MTAB-11053:Sample 1_p</SUBMITTER_ID>
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    <TITLE>Illumina HiSeq 1500 paired end sequencing; RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</TITLE>
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      <DESIGN_DESCRIPTION>RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>ERS8032921</PRIMARY_ID>
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          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>2 × 10^6 HT-29 cells were implanted into the flanks of Rag1−/− mice via subcutaneous injection. Tumor tissues were collected 20 day post injection. Total RNA was extracted using peqGOLD RNA Kit (732-2868, Peqlab) according to the manufacturer's protocol. Sequencing libraries were generated using NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample. PCR was performed with Phusion High-Fidelity DNA polymerase (New England Biolabs), Universal PCR primers and Index (X) Primer. PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system. The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
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      <PRIMARY_ID>ERX6625718</PRIMARY_ID>
      <SUBMITTER_ID namespace="Medizinische Klinik I Universitatsklinikum Erlangen">E-MTAB-11053:Sample 2_p</SUBMITTER_ID>
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    <TITLE>Illumina HiSeq 1500 paired end sequencing; RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</TITLE>
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      <DESIGN_DESCRIPTION>RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</DESIGN_DESCRIPTION>
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        <LIBRARY_SELECTION>Oligo-dT</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>2 × 10^6 HT-29 cells were implanted into the flanks of Rag1−/− mice via subcutaneous injection. Tumor tissues were collected 20 day post injection. Total RNA was extracted using peqGOLD RNA Kit (732-2868, Peqlab) according to the manufacturer's protocol. Sequencing libraries were generated using NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample. PCR was performed with Phusion High-Fidelity DNA polymerase (New England Biolabs), Universal PCR primers and Index (X) Primer. PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system. The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
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        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
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      <PRIMARY_ID>ERX6625719</PRIMARY_ID>
      <SUBMITTER_ID namespace="Medizinische Klinik I Universitatsklinikum Erlangen">E-MTAB-11053:Sample 3_p</SUBMITTER_ID>
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    <TITLE>Illumina HiSeq 1500 paired end sequencing; RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>ERP132462</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJEB48141</EXTERNAL_ID>
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      <DESIGN_DESCRIPTION>RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>ERS8032923</PRIMARY_ID>
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        <LIBRARY_NAME>Sample 3_p</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
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        <LIBRARY_SELECTION>Oligo-dT</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>2 × 10^6 HT-29 cells were implanted into the flanks of Rag1−/− mice via subcutaneous injection. Tumor tissues were collected 20 day post injection. Total RNA was extracted using peqGOLD RNA Kit (732-2868, Peqlab) according to the manufacturer's protocol. Sequencing libraries were generated using NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample. PCR was performed with Phusion High-Fidelity DNA polymerase (New England Biolabs), Universal PCR primers and Index (X) Primer. PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system. The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
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      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
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      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: cell type</TAG>
        <VALUE>SMYD2-KO2</VALUE>
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      <PRIMARY_ID>ERX6625720</PRIMARY_ID>
      <SUBMITTER_ID namespace="Medizinische Klinik I Universitatsklinikum Erlangen">E-MTAB-11053:Sample 4_p</SUBMITTER_ID>
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    <TITLE>Illumina HiSeq 1500 paired end sequencing; RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</TITLE>
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      <DESIGN_DESCRIPTION>RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>ERS8032924</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMEA10378350</EXTERNAL_ID>
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        <LIBRARY_NAME>Sample 4_p</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Oligo-dT</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>2 × 10^6 HT-29 cells were implanted into the flanks of Rag1−/− mice via subcutaneous injection. Tumor tissues were collected 20 day post injection. Total RNA was extracted using peqGOLD RNA Kit (732-2868, Peqlab) according to the manufacturer's protocol. Sequencing libraries were generated using NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample. PCR was performed with Phusion High-Fidelity DNA polymerase (New England Biolabs), Universal PCR primers and Index (X) Primer. PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system. The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
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      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: cell type</TAG>
        <VALUE>SMYD2-KO2</VALUE>
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      <PRIMARY_ID>ERX6625721</PRIMARY_ID>
      <SUBMITTER_ID namespace="Medizinische Klinik I Universitatsklinikum Erlangen">E-MTAB-11053:Sample 5_p</SUBMITTER_ID>
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    <TITLE>Illumina HiSeq 1500 paired end sequencing; RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</TITLE>
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        <PRIMARY_ID>ERP132462</PRIMARY_ID>
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      <DESIGN_DESCRIPTION>RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</DESIGN_DESCRIPTION>
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          <PRIMARY_ID>ERS8032925</PRIMARY_ID>
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        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Oligo-dT</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>2 × 10^6 HT-29 cells were implanted into the flanks of Rag1−/− mice via subcutaneous injection. Tumor tissues were collected 20 day post injection. Total RNA was extracted using peqGOLD RNA Kit (732-2868, Peqlab) according to the manufacturer's protocol. Sequencing libraries were generated using NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample. PCR was performed with Phusion High-Fidelity DNA polymerase (New England Biolabs), Universal PCR primers and Index (X) Primer. PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system. The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
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      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
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    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: cell type</TAG>
        <VALUE>SMYD2-KO6</VALUE>
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      <PRIMARY_ID>ERX6625722</PRIMARY_ID>
      <SUBMITTER_ID namespace="Medizinische Klinik I Universitatsklinikum Erlangen">E-MTAB-11053:Sample 6_p</SUBMITTER_ID>
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    <TITLE>Illumina HiSeq 1500 paired end sequencing; RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>ERP132462</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJEB48141</EXTERNAL_ID>
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    <DESIGN>
      <DESIGN_DESCRIPTION>RNA-seq of human HT-29 WT and SMYD2-KO xenograft implanted into the flanks of Rag1−/− mice</DESIGN_DESCRIPTION>
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        <IDENTIFIERS>
          <PRIMARY_ID>ERS8032926</PRIMARY_ID>
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      <LIBRARY_DESCRIPTOR>
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        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>Oligo-dT</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>2 × 10^6 HT-29 cells were implanted into the flanks of Rag1−/− mice via subcutaneous injection. Tumor tissues were collected 20 day post injection. Total RNA was extracted using peqGOLD RNA Kit (732-2868, Peqlab) according to the manufacturer's protocol. Sequencing libraries were generated using NEBNext Ultra RNA Library Prep Kit for Illumina (New England Biolabs) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample. PCR was performed with Phusion High-Fidelity DNA polymerase (New England Biolabs), Universal PCR primers and Index (X) Primer. PCR products were purified (AMPure XP system) and library quality was assessed on the Agilent Bioanalyzer 2100 system. The clustering of the index-coded samples was performed on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina) according to the manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
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    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>Experimental Factor: cell type</TAG>
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