ERX1623248 qiita_ptid_1145:1706.BLANK10J.B12.prev qiita_ptid_1145:1706.BLANK10J.B12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271093 SAMEA4359644 1706.BLANK10J.B12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGCGTACATTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK10J.B12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1623249 qiita_ptid_1145:1706.BLANK10J.E5.prev qiita_ptid_1145:1706.BLANK10J.E5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271094 SAMEA4359645 1706.BLANK10J.E5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCGAATCGAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK10J.E5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623250 qiita_ptid_1145:1706.BLANK3C.E5.prev qiita_ptid_1145:1706.BLANK3C.E5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271095 SAMEA4359646 1706.BLANK3C.E5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGACGTGTTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK3C.E5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623251 qiita_ptid_1145:1706.BLANK3C.H12.prev qiita_ptid_1145:1706.BLANK3C.H12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271096 SAMEA4359647 1706.BLANK3C.H12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAATGCTACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK3C.H12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1623252 qiita_ptid_1145:1706.BLANK4D.H4.prev qiita_ptid_1145:1706.BLANK4D.H4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271097 SAMEA4359648 1706.BLANK4D.H4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTACATGAGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK4D.H4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1623253 qiita_ptid_1145:1706.BLANK5E.G7.prev qiita_ptid_1145:1706.BLANK5E.G7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271098 SAMEA4359649 1706.BLANK5E.G7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACAAGAACCTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK5E.G7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1623254 qiita_ptid_1145:1706.BLANK5E.H3.prev qiita_ptid_1145:1706.BLANK5E.H3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271099 SAMEA4359650 1706.BLANK5E.H3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGACATTTCTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK5E.H3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1623255 qiita_ptid_1145:1706.BLANK6F.C4.prev qiita_ptid_1145:1706.BLANK6F.C4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271100 SAMEA4359651 1706.BLANK6F.C4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAACCTATGACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK6F.C4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1623256 qiita_ptid_1145:1706.BLANK6F.D8.prev qiita_ptid_1145:1706.BLANK6F.D8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271101 SAMEA4359652 1706.BLANK6F.D8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGCCAGTGCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK6F.D8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1623257 qiita_ptid_1145:1706.BLANK7G.B10.prev qiita_ptid_1145:1706.BLANK7G.B10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271102 SAMEA4359653 1706.BLANK7G.B10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCAACGCTGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK7G.B10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1623258 qiita_ptid_1145:1706.BLANK7G.E11.prev qiita_ptid_1145:1706.BLANK7G.E11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271103 SAMEA4359654 1706.BLANK7G.E11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATGTAAGGCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK7G.E11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1623259 qiita_ptid_1145:1706.BLANK7G.G11.prev qiita_ptid_1145:1706.BLANK7G.G11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271104 SAMEA4359655 1706.BLANK7G.G11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCCTGTTAACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK7G.G11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1623260 qiita_ptid_1145:1706.BLANK8H.D10.prev qiita_ptid_1145:1706.BLANK8H.D10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271105 SAMEA4359656 1706.BLANK8H.D10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCACCCTCTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK8H.D10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623261 qiita_ptid_1145:1706.BLANK8H.H10.prev qiita_ptid_1145:1706.BLANK8H.H10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271106 SAMEA4359657 1706.BLANK8H.H10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTAGGGAGCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK8H.H10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623262 qiita_ptid_1145:1706.BLANK8H.H5.prev qiita_ptid_1145:1706.BLANK8H.H5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271107 SAMEA4359658 1706.BLANK8H.H5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTAGGCAGGTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK8H.H5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1623263 qiita_ptid_1145:1706.BLANK9I.C11.prev qiita_ptid_1145:1706.BLANK9I.C11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271108 SAMEA4359659 1706.BLANK9I.C11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTCATCTTCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK9I.C11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623264 qiita_ptid_1145:1706.BLANK9I.D9.prev qiita_ptid_1145:1706.BLANK9I.D9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271109 SAMEA4359660 1706.BLANK9I.D9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCTGCAGTACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name BLANK9I.D9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623265 qiita_ptid_1145:1706.DD1.prev qiita_ptid_1145:1706.DD1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271110 SAMEA4359661 1706.DD1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCACACCCTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623266 qiita_ptid_1145:1706.DD10.prev qiita_ptid_1145:1706.DD10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271111 SAMEA4359662 1706.DD10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGTACACGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623267 qiita_ptid_1145:1706.DD11.prev qiita_ptid_1145:1706.DD11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271112 SAMEA4359663 1706.DD11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGTAGCACCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623268 qiita_ptid_1145:1706.DD12.prev qiita_ptid_1145:1706.DD12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271113 SAMEA4359664 1706.DD12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACAAAGCGATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623269 qiita_ptid_1145:1706.DD13.prev qiita_ptid_1145:1706.DD13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271114 SAMEA4359665 1706.DD13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTACAGTTGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623270 qiita_ptid_1145:1706.DD14.prev qiita_ptid_1145:1706.DD14.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271115 SAMEA4359666 1706.DD14.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGACTCAACTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD14 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623271 qiita_ptid_1145:1706.DD15.prev qiita_ptid_1145:1706.DD15.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271116 SAMEA4359667 1706.DD15.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGACGCCTCCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD15 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623272 qiita_ptid_1145:1706.DD16.prev qiita_ptid_1145:1706.DD16.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271117 SAMEA4359668 1706.DD16.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCTTCCAATTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD16 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623273 qiita_ptid_1145:1706.DD17.prev qiita_ptid_1145:1706.DD17.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271118 SAMEA4359669 1706.DD17.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGCGCAACTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD17 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623274 qiita_ptid_1145:1706.DD18.prev qiita_ptid_1145:1706.DD18.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271119 SAMEA4359670 1706.DD18.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGAGCTAATTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD18 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623275 qiita_ptid_1145:1706.DD19.prev qiita_ptid_1145:1706.DD19.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271120 SAMEA4359671 1706.DD19.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGTCATCTTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD19 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623276 qiita_ptid_1145:1706.DD2.prev qiita_ptid_1145:1706.DD2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271121 SAMEA4359672 1706.DD2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACTCTGCTCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623277 qiita_ptid_1145:1706.DD20.prev qiita_ptid_1145:1706.DD20.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271122 SAMEA4359673 1706.DD20.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACCGTGACACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD20 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623278 qiita_ptid_1145:1706.DD21.prev qiita_ptid_1145:1706.DD21.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271123 SAMEA4359674 1706.DD21.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGACTCGTTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD21 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623279 qiita_ptid_1145:1706.DD22.prev qiita_ptid_1145:1706.DD22.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271124 SAMEA4359675 1706.DD22.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATACGGGTTCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD22 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623280 qiita_ptid_1145:1706.DD23.prev qiita_ptid_1145:1706.DD23.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271125 SAMEA4359676 1706.DD23.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCTCGGTTCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD23 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623281 qiita_ptid_1145:1706.DD24.prev qiita_ptid_1145:1706.DD24.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271126 SAMEA4359677 1706.DD24.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCGAGATAATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD24 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1623282 qiita_ptid_1145:1706.DD27.prev qiita_ptid_1145:1706.DD27.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271127 SAMEA4359678 1706.DD27.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTCCTCTCCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD27 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1623283 qiita_ptid_1145:1706.DD28.prev qiita_ptid_1145:1706.DD28.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271128 SAMEA4359679 1706.DD28.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTATCCAGTCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD28 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1623284 qiita_ptid_1145:1706.DD29.prev qiita_ptid_1145:1706.DD29.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271129 SAMEA4359680 1706.DD29.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCTGTGACCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD29 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1623285 qiita_ptid_1145:1706.DD3.prev qiita_ptid_1145:1706.DD3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271130 SAMEA4359681 1706.DD3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGTCTCAGTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623286 qiita_ptid_1145:1706.DD30.prev qiita_ptid_1145:1706.DD30.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271131 SAMEA4359682 1706.DD30.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAGATCTATCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD30 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1623287 qiita_ptid_1145:1706.DD31.prev qiita_ptid_1145:1706.DD31.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271132 SAMEA4359683 1706.DD31.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTCGCACTGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD31 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1623288 qiita_ptid_1145:1706.DD32.prev qiita_ptid_1145:1706.DD32.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271133 SAMEA4359684 1706.DD32.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTTTCACCTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD32 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1623289 qiita_ptid_1145:1706.DD33.prev qiita_ptid_1145:1706.DD33.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271134 SAMEA4359685 1706.DD33.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTACTGGTATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD33 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1623290 qiita_ptid_1145:1706.DD35.prev qiita_ptid_1145:1706.DD35.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271135 SAMEA4359686 1706.DD35.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGTTCATCCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD35 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623291 qiita_ptid_1145:1706.DD36.prev qiita_ptid_1145:1706.DD36.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271136 SAMEA4359687 1706.DD36.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTAAGACGTCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD36 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623292 qiita_ptid_1145:1706.DD37.prev qiita_ptid_1145:1706.DD37.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271137 SAMEA4359688 1706.DD37.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACTTCGGCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD37 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623293 qiita_ptid_1145:1706.DD38.prev qiita_ptid_1145:1706.DD38.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271138 SAMEA4359689 1706.DD38.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACGGAACAGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD38 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623294 qiita_ptid_1145:1706.DD39.prev qiita_ptid_1145:1706.DD39.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271139 SAMEA4359690 1706.DD39.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCTGGTCTTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD39 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623295 qiita_ptid_1145:1706.DD4.prev qiita_ptid_1145:1706.DD4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271140 SAMEA4359691 1706.DD4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCACGAGTCACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623296 qiita_ptid_1145:1706.DD40.prev qiita_ptid_1145:1706.DD40.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271141 SAMEA4359692 1706.DD40.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCAGCCAGCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD40 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1623297 qiita_ptid_1145:1706.DD41.prev qiita_ptid_1145:1706.DD41.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271142 SAMEA4359693 1706.DD41.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAATCCTCACCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD41 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1623298 qiita_ptid_1145:1706.DD42.prev qiita_ptid_1145:1706.DD42.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271143 SAMEA4359694 1706.DD42.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCCTATCTTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD42 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1623299 qiita_ptid_1145:1706.DD43.prev qiita_ptid_1145:1706.DD43.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271144 SAMEA4359695 1706.DD43.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCACTTTGAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD43 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1623300 qiita_ptid_1145:1706.DD44.prev qiita_ptid_1145:1706.DD44.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271145 SAMEA4359696 1706.DD44.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCTCAGATTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD44 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623301 qiita_ptid_1145:1706.DD45.prev qiita_ptid_1145:1706.DD45.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271146 SAMEA4359697 1706.DD45.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCTCCCGGATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD45 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623302 qiita_ptid_1145:1706.DD46.prev qiita_ptid_1145:1706.DD46.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271147 SAMEA4359698 1706.DD46.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGACCGCTTTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD46 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623303 qiita_ptid_1145:1706.DD47.prev qiita_ptid_1145:1706.DD47.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271148 SAMEA4359699 1706.DD47.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCCACTTGGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD47 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623304 qiita_ptid_1145:1706.DD48.prev qiita_ptid_1145:1706.DD48.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271149 SAMEA4359700 1706.DD48.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTCCACAACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD48 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623305 qiita_ptid_1145:1706.DD5.prev qiita_ptid_1145:1706.DD5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271150 SAMEA4359701 1706.DD5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATGTCTTCCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623306 qiita_ptid_1145:1706.DD50.prev qiita_ptid_1145:1706.DD50.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271151 SAMEA4359702 1706.DD50.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGTACGCAATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD50 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623307 qiita_ptid_1145:1706.DD51.prev qiita_ptid_1145:1706.DD51.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271152 SAMEA4359703 1706.DD51.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCACGGTACTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD51 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623308 qiita_ptid_1145:1706.DD52.prev qiita_ptid_1145:1706.DD52.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271153 SAMEA4359704 1706.DD52.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTGGTAGTGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD52 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623309 qiita_ptid_1145:1706.DD53.prev qiita_ptid_1145:1706.DD53.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271154 SAMEA4359705 1706.DD53.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAGAGGGTTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD53 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623310 qiita_ptid_1145:1706.DD54.prev qiita_ptid_1145:1706.DD54.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271155 SAMEA4359706 1706.DD54.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGGTCCTATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD54 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623311 qiita_ptid_1145:1706.DD55.prev qiita_ptid_1145:1706.DD55.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271156 SAMEA4359707 1706.DD55.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATTTAGAGGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD55 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623312 qiita_ptid_1145:1706.DD56.prev qiita_ptid_1145:1706.DD56.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271157 SAMEA4359708 1706.DD56.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGGAGTGCGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD56 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1623313 qiita_ptid_1145:1706.DD57.prev qiita_ptid_1145:1706.DD57.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271158 SAMEA4359709 1706.DD57.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGCGTTTAGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD57 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1623314 qiita_ptid_1145:1706.DD58.prev qiita_ptid_1145:1706.DD58.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271159 SAMEA4359710 1706.DD58.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCCCTATTATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD58 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1623315 qiita_ptid_1145:1706.DD59.prev qiita_ptid_1145:1706.DD59.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271160 SAMEA4359711 1706.DD59.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTAGTTGGACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD59 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1623316 qiita_ptid_1145:1706.DD6.prev qiita_ptid_1145:1706.DD6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271161 SAMEA4359712 1706.DD6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCCTGACACTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1623317 qiita_ptid_1145:1706.DD60.prev qiita_ptid_1145:1706.DD60.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271162 SAMEA4359713 1706.DD60.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGCTGCGCTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD60 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1623318 qiita_ptid_1145:1706.DD61.prev qiita_ptid_1145:1706.DD61.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271163 SAMEA4359714 1706.DD61.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTAGACTTACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD61 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1623319 qiita_ptid_1145:1706.DD62.prev qiita_ptid_1145:1706.DD62.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271164 SAMEA4359715 1706.DD62.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAATGACGTTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD62 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1623320 qiita_ptid_1145:1706.DD63.prev qiita_ptid_1145:1706.DD63.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271165 SAMEA4359716 1706.DD63.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCAGCCGTTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD63 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1623321 qiita_ptid_1145:1706.DD64.prev qiita_ptid_1145:1706.DD64.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271166 SAMEA4359717 1706.DD64.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGGAAAGGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD64 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1623322 qiita_ptid_1145:1706.DD65.prev qiita_ptid_1145:1706.DD65.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271167 SAMEA4359718 1706.DD65.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTATGGCTACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD65 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1623323 qiita_ptid_1145:1706.DD66.prev qiita_ptid_1145:1706.DD66.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271168 SAMEA4359719 1706.DD66.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGGACATATCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD66 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1623324 qiita_ptid_1145:1706.DD7.prev qiita_ptid_1145:1706.DD7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271169 SAMEA4359720 1706.DD7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGTAAGCCGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1623325 qiita_ptid_1145:1706.DD8.prev qiita_ptid_1145:1706.DD8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271170 SAMEA4359721 1706.DD8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGTAGGCTTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1623326 qiita_ptid_1145:1706.DD9.prev qiita_ptid_1145:1706.DD9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271171 SAMEA4359722 1706.DD9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCCAGCTATGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name DD9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1623327 qiita_ptid_1145:1706.F1.0.prev qiita_ptid_1145:1706.F1.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271172 SAMEA4359723 1706.F1.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCGAATTTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623328 qiita_ptid_1145:1706.F1.1.prev qiita_ptid_1145:1706.F1.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271173 SAMEA4359724 1706.F1.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTCTCTCACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623329 qiita_ptid_1145:1706.F1.10.prev qiita_ptid_1145:1706.F1.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271174 SAMEA4359725 1706.F1.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGTAACCACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623330 qiita_ptid_1145:1706.F1.11.prev qiita_ptid_1145:1706.F1.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271175 SAMEA4359726 1706.F1.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTACCAACCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623331 qiita_ptid_1145:1706.F1.12.prev qiita_ptid_1145:1706.F1.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271176 SAMEA4359727 1706.F1.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATGTATGTGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623332 qiita_ptid_1145:1706.F1.2.prev qiita_ptid_1145:1706.F1.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271177 SAMEA4359728 1706.F1.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCCTTGTCTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623333 qiita_ptid_1145:1706.F1.3.prev qiita_ptid_1145:1706.F1.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271178 SAMEA4359729 1706.F1.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGAGCCTTGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623334 qiita_ptid_1145:1706.F1.4.prev qiita_ptid_1145:1706.F1.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271179 SAMEA4359730 1706.F1.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGTAAAGGTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623335 qiita_ptid_1145:1706.F1.5.prev qiita_ptid_1145:1706.F1.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271180 SAMEA4359731 1706.F1.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCCTTTGGTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623336 qiita_ptid_1145:1706.F1.6.prev qiita_ptid_1145:1706.F1.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271181 SAMEA4359732 1706.F1.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTTGCTCGAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623337 qiita_ptid_1145:1706.F1.7.prev qiita_ptid_1145:1706.F1.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271182 SAMEA4359733 1706.F1.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTATCGTCCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623338 qiita_ptid_1145:1706.F1.8.prev qiita_ptid_1145:1706.F1.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271183 SAMEA4359734 1706.F1.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGAATTATCGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623339 qiita_ptid_1145:1706.F1.9.prev qiita_ptid_1145:1706.F1.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271184 SAMEA4359735 1706.F1.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTTAGATGTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F1.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623340 qiita_ptid_1145:1706.F10.0.prev qiita_ptid_1145:1706.F10.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271185 SAMEA4359736 1706.F10.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACTTCATGCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623341 qiita_ptid_1145:1706.F10.1.prev qiita_ptid_1145:1706.F10.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271186 SAMEA4359737 1706.F10.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCGCCGTACAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623342 qiita_ptid_1145:1706.F10.10.prev qiita_ptid_1145:1706.F10.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271187 SAMEA4359738 1706.F10.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACTCAACCAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623343 qiita_ptid_1145:1706.F10.11.prev qiita_ptid_1145:1706.F10.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271188 SAMEA4359739 1706.F10.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACAGGGTTTGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623344 qiita_ptid_1145:1706.F10.12.prev qiita_ptid_1145:1706.F10.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271189 SAMEA4359740 1706.F10.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACTCGGGAACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623345 qiita_ptid_1145:1706.F10.13.prev qiita_ptid_1145:1706.F10.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271190 SAMEA4359741 1706.F10.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGATCGTACTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623346 qiita_ptid_1145:1706.F10.2.prev qiita_ptid_1145:1706.F10.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271191 SAMEA4359742 1706.F10.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTCGAACGAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623347 qiita_ptid_1145:1706.F10.3.prev qiita_ptid_1145:1706.F10.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271192 SAMEA4359743 1706.F10.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATGCGGATCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623348 qiita_ptid_1145:1706.F10.5.prev qiita_ptid_1145:1706.F10.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271193 SAMEA4359744 1706.F10.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAACTCCCGTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623349 qiita_ptid_1145:1706.F10.6.prev qiita_ptid_1145:1706.F10.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271194 SAMEA4359745 1706.F10.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTGGTCGTTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623350 qiita_ptid_1145:1706.F10.7.prev qiita_ptid_1145:1706.F10.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271195 SAMEA4359746 1706.F10.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACGCACTAACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623351 qiita_ptid_1145:1706.F10.8.prev qiita_ptid_1145:1706.F10.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271196 SAMEA4359747 1706.F10.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTGCAAGCAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623352 qiita_ptid_1145:1706.F10.9.prev qiita_ptid_1145:1706.F10.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271197 SAMEA4359748 1706.F10.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACACTCGATCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F10.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1623353 qiita_ptid_1145:1706.F11.0.prev qiita_ptid_1145:1706.F11.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271198 SAMEA4359749 1706.F11.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTTAGGACGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623354 qiita_ptid_1145:1706.F11.1.prev qiita_ptid_1145:1706.F11.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271199 SAMEA4359750 1706.F11.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACGGATTATGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1623355 qiita_ptid_1145:1706.F11.10.prev qiita_ptid_1145:1706.F11.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271200 SAMEA4359751 1706.F11.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCACTTGGTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623356 qiita_ptid_1145:1706.F11.11.prev qiita_ptid_1145:1706.F11.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271201 SAMEA4359752 1706.F11.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAACAGCTCTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623357 qiita_ptid_1145:1706.F11.12.prev qiita_ptid_1145:1706.F11.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271202 SAMEA4359753 1706.F11.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCTCTCGACAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623358 qiita_ptid_1145:1706.F11.13.prev qiita_ptid_1145:1706.F11.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271203 SAMEA4359754 1706.F11.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTCGTGTCTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1623359 qiita_ptid_1145:1706.F11.2.prev qiita_ptid_1145:1706.F11.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271204 SAMEA4359755 1706.F11.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAGCAATCCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623360 qiita_ptid_1145:1706.F11.3.prev qiita_ptid_1145:1706.F11.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271205 SAMEA4359756 1706.F11.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGCTTGAAACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623361 qiita_ptid_1145:1706.F11.4.prev qiita_ptid_1145:1706.F11.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271206 SAMEA4359757 1706.F11.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAAGCTGTCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623362 qiita_ptid_1145:1706.F11.5.prev qiita_ptid_1145:1706.F11.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271207 SAMEA4359758 1706.F11.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGTATGCGCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1623363 qiita_ptid_1145:1706.F11.6.prev qiita_ptid_1145:1706.F11.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271208 SAMEA4359759 1706.F11.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGGCTATAGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623364 qiita_ptid_1145:1706.F11.7.prev qiita_ptid_1145:1706.F11.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271209 SAMEA4359760 1706.F11.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGCTAACCACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623365 qiita_ptid_1145:1706.F11.8.prev qiita_ptid_1145:1706.F11.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271210 SAMEA4359761 1706.F11.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTCCCTAACTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623366 qiita_ptid_1145:1706.F11.9.prev qiita_ptid_1145:1706.F11.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271211 SAMEA4359762 1706.F11.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAGCCCTAGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F11.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623367 qiita_ptid_1145:1706.F12.0.prev qiita_ptid_1145:1706.F12.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271212 SAMEA4359763 1706.F12.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCCCTACGGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623368 qiita_ptid_1145:1706.F12.1.prev qiita_ptid_1145:1706.F12.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271213 SAMEA4359764 1706.F12.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTTTAACACGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623369 qiita_ptid_1145:1706.F12.10.prev qiita_ptid_1145:1706.F12.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271214 SAMEA4359765 1706.F12.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCTAATCGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623370 qiita_ptid_1145:1706.F12.11.prev qiita_ptid_1145:1706.F12.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271215 SAMEA4359766 1706.F12.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTTGAAACACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623371 qiita_ptid_1145:1706.F12.12.prev qiita_ptid_1145:1706.F12.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271216 SAMEA4359767 1706.F12.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGAAATGTGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623372 qiita_ptid_1145:1706.F12.13.prev qiita_ptid_1145:1706.F12.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271217 SAMEA4359768 1706.F12.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCCAAGTTCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623373 qiita_ptid_1145:1706.F12.2.prev qiita_ptid_1145:1706.F12.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271218 SAMEA4359769 1706.F12.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCAGTCCTCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623374 qiita_ptid_1145:1706.F12.3.prev qiita_ptid_1145:1706.F12.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271219 SAMEA4359770 1706.F12.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAAGATGCAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623375 qiita_ptid_1145:1706.F12.4.prev qiita_ptid_1145:1706.F12.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271220 SAMEA4359771 1706.F12.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATGATAACCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623376 qiita_ptid_1145:1706.F12.5.prev qiita_ptid_1145:1706.F12.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271221 SAMEA4359772 1706.F12.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGGAATTAGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623377 qiita_ptid_1145:1706.F12.6.prev qiita_ptid_1145:1706.F12.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271222 SAMEA4359773 1706.F12.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTAGGTGCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623378 qiita_ptid_1145:1706.F12.7.prev qiita_ptid_1145:1706.F12.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271223 SAMEA4359774 1706.F12.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAAGCGGTATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623379 qiita_ptid_1145:1706.F12.8.prev qiita_ptid_1145:1706.F12.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271224 SAMEA4359775 1706.F12.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCATAAGAACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623380 qiita_ptid_1145:1706.F12.9.prev qiita_ptid_1145:1706.F12.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271225 SAMEA4359776 1706.F12.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCGCTCACATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F12.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623381 qiita_ptid_1145:1706.F13.0.prev qiita_ptid_1145:1706.F13.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271226 SAMEA4359777 1706.F13.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCGTAAACTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623382 qiita_ptid_1145:1706.F13.1.prev qiita_ptid_1145:1706.F13.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271227 SAMEA4359778 1706.F13.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCCCTTTGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623383 qiita_ptid_1145:1706.F13.10.prev qiita_ptid_1145:1706.F13.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271228 SAMEA4359779 1706.F13.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTTCCAGACAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623384 qiita_ptid_1145:1706.F13.11.prev qiita_ptid_1145:1706.F13.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271229 SAMEA4359780 1706.F13.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCCTACGAGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623385 qiita_ptid_1145:1706.F13.12.prev qiita_ptid_1145:1706.F13.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271230 SAMEA4359781 1706.F13.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGACTGCATAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623386 qiita_ptid_1145:1706.F13.13.prev qiita_ptid_1145:1706.F13.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271231 SAMEA4359782 1706.F13.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGGATTCGTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623387 qiita_ptid_1145:1706.F13.2.prev qiita_ptid_1145:1706.F13.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271232 SAMEA4359783 1706.F13.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCCAGTTCCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623388 qiita_ptid_1145:1706.F13.3.prev qiita_ptid_1145:1706.F13.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271233 SAMEA4359784 1706.F13.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTACCACGGTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623389 qiita_ptid_1145:1706.F13.4.prev qiita_ptid_1145:1706.F13.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271234 SAMEA4359785 1706.F13.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGACATTGTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623390 qiita_ptid_1145:1706.F13.5.prev qiita_ptid_1145:1706.F13.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271235 SAMEA4359786 1706.F13.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATACCGCTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623391 qiita_ptid_1145:1706.F13.6.prev qiita_ptid_1145:1706.F13.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271236 SAMEA4359787 1706.F13.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACATCAGGTCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623392 qiita_ptid_1145:1706.F13.7.prev qiita_ptid_1145:1706.F13.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271237 SAMEA4359788 1706.F13.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAATGCCCAGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623393 qiita_ptid_1145:1706.F13.8.prev qiita_ptid_1145:1706.F13.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271238 SAMEA4359789 1706.F13.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAATGGTCGTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623394 qiita_ptid_1145:1706.F13.9.prev qiita_ptid_1145:1706.F13.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271239 SAMEA4359790 1706.F13.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATACACGCACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F13.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623395 qiita_ptid_1145:1706.F14.0.prev qiita_ptid_1145:1706.F14.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271240 SAMEA4359791 1706.F14.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTCTAGCCGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623396 qiita_ptid_1145:1706.F14.1.prev qiita_ptid_1145:1706.F14.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271241 SAMEA4359792 1706.F14.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTCTCCTACAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623397 qiita_ptid_1145:1706.F14.10.prev qiita_ptid_1145:1706.F14.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271242 SAMEA4359793 1706.F14.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGGCCTACTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623398 qiita_ptid_1145:1706.F14.11.prev qiita_ptid_1145:1706.F14.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271243 SAMEA4359794 1706.F14.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTGGCACTATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623399 qiita_ptid_1145:1706.F14.12.prev qiita_ptid_1145:1706.F14.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271244 SAMEA4359795 1706.F14.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACGCGGTTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623400 qiita_ptid_1145:1706.F14.13.prev qiita_ptid_1145:1706.F14.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271245 SAMEA4359796 1706.F14.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTGCCCTTGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623401 qiita_ptid_1145:1706.F14.2.prev qiita_ptid_1145:1706.F14.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271246 SAMEA4359797 1706.F14.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGGAGTCTCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623402 qiita_ptid_1145:1706.F14.3.prev qiita_ptid_1145:1706.F14.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271247 SAMEA4359798 1706.F14.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGACAACCGAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623403 qiita_ptid_1145:1706.F14.4.prev qiita_ptid_1145:1706.F14.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271248 SAMEA4359799 1706.F14.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGCGATACGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623404 qiita_ptid_1145:1706.F14.5.prev qiita_ptid_1145:1706.F14.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271249 SAMEA4359800 1706.F14.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATCGACACAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623405 qiita_ptid_1145:1706.F14.6.prev qiita_ptid_1145:1706.F14.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271250 SAMEA4359801 1706.F14.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGGACGCATTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623406 qiita_ptid_1145:1706.F14.7.prev qiita_ptid_1145:1706.F14.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271251 SAMEA4359802 1706.F14.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTGAGTGAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623407 qiita_ptid_1145:1706.F14.8.prev qiita_ptid_1145:1706.F14.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271252 SAMEA4359803 1706.F14.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATATCGCGATGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623408 qiita_ptid_1145:1706.F14.9.prev qiita_ptid_1145:1706.F14.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271253 SAMEA4359804 1706.F14.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCATCATGTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F14.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623409 qiita_ptid_1145:1706.F15.0.prev qiita_ptid_1145:1706.F15.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271254 SAMEA4359805 1706.F15.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTAAGCCTGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623410 qiita_ptid_1145:1706.F15.1.prev qiita_ptid_1145:1706.F15.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271255 SAMEA4359806 1706.F15.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAGCGAACTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623411 qiita_ptid_1145:1706.F15.10.prev qiita_ptid_1145:1706.F15.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271256 SAMEA4359807 1706.F15.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACAGAGGTGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623412 qiita_ptid_1145:1706.F15.11.prev qiita_ptid_1145:1706.F15.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271257 SAMEA4359808 1706.F15.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGCAAACACTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623413 qiita_ptid_1145:1706.F15.12.prev qiita_ptid_1145:1706.F15.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271258 SAMEA4359809 1706.F15.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACGTAGGCTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623414 qiita_ptid_1145:1706.F15.13.prev qiita_ptid_1145:1706.F15.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271259 SAMEA4359810 1706.F15.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTCGTCTAAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623415 qiita_ptid_1145:1706.F15.2.prev qiita_ptid_1145:1706.F15.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271260 SAMEA4359811 1706.F15.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGGGTTCCGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623416 qiita_ptid_1145:1706.F15.3.prev qiita_ptid_1145:1706.F15.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271261 SAMEA4359812 1706.F15.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAGACAGCGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623417 qiita_ptid_1145:1706.F15.4.prev qiita_ptid_1145:1706.F15.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271262 SAMEA4359813 1706.F15.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTACTACCTCGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623418 qiita_ptid_1145:1706.F15.5.prev qiita_ptid_1145:1706.F15.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271263 SAMEA4359814 1706.F15.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCGCTGAATGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623419 qiita_ptid_1145:1706.F15.6.prev qiita_ptid_1145:1706.F15.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271264 SAMEA4359815 1706.F15.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGTAGCTTGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623420 qiita_ptid_1145:1706.F15.7.prev qiita_ptid_1145:1706.F15.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271265 SAMEA4359816 1706.F15.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCAAGGATAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623421 qiita_ptid_1145:1706.F15.8.prev qiita_ptid_1145:1706.F15.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271266 SAMEA4359817 1706.F15.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAGGCACAAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623422 qiita_ptid_1145:1706.F15.9.prev qiita_ptid_1145:1706.F15.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271267 SAMEA4359818 1706.F15.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAATCGTGCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F15.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623423 qiita_ptid_1145:1706.F16.0.prev qiita_ptid_1145:1706.F16.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271268 SAMEA4359819 1706.F16.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGGGTATCTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623424 qiita_ptid_1145:1706.F16.1.prev qiita_ptid_1145:1706.F16.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271269 SAMEA4359820 1706.F16.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTGAGAAATCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623425 qiita_ptid_1145:1706.F16.10.prev qiita_ptid_1145:1706.F16.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271270 SAMEA4359821 1706.F16.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGTCTTGGTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623426 qiita_ptid_1145:1706.F16.11.prev qiita_ptid_1145:1706.F16.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271271 SAMEA4359822 1706.F16.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCGGATAGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623427 qiita_ptid_1145:1706.F16.12.prev qiita_ptid_1145:1706.F16.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271272 SAMEA4359823 1706.F16.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTTCGGTCCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623428 qiita_ptid_1145:1706.F16.13.prev qiita_ptid_1145:1706.F16.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271273 SAMEA4359824 1706.F16.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATCAACTAGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623429 qiita_ptid_1145:1706.F16.2.prev qiita_ptid_1145:1706.F16.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271274 SAMEA4359825 1706.F16.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGTTCTAGCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623430 qiita_ptid_1145:1706.F16.3.prev qiita_ptid_1145:1706.F16.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271275 SAMEA4359826 1706.F16.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTCCGGATTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623431 qiita_ptid_1145:1706.F16.4.prev qiita_ptid_1145:1706.F16.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271276 SAMEA4359827 1706.F16.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACGTTAGTGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623432 qiita_ptid_1145:1706.F16.5.prev qiita_ptid_1145:1706.F16.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271277 SAMEA4359828 1706.F16.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGAGTAGGTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623433 qiita_ptid_1145:1706.F16.6.prev qiita_ptid_1145:1706.F16.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271278 SAMEA4359829 1706.F16.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAAGACTACTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623434 qiita_ptid_1145:1706.F16.7.prev qiita_ptid_1145:1706.F16.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271279 SAMEA4359830 1706.F16.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTACGGCACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623435 qiita_ptid_1145:1706.F16.8.prev qiita_ptid_1145:1706.F16.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271280 SAMEA4359831 1706.F16.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCACATCACGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623436 qiita_ptid_1145:1706.F16.9.prev qiita_ptid_1145:1706.F16.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271281 SAMEA4359832 1706.F16.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAAGCATCTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F16.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623437 qiita_ptid_1145:1706.F17.0.prev qiita_ptid_1145:1706.F17.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271282 SAMEA4359833 1706.F17.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGGTCATCGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623438 qiita_ptid_1145:1706.F17.1.prev qiita_ptid_1145:1706.F17.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271283 SAMEA4359834 1706.F17.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCTTCAGCAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623439 qiita_ptid_1145:1706.F17.10.prev qiita_ptid_1145:1706.F17.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271284 SAMEA4359835 1706.F17.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTAACGAGTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623440 qiita_ptid_1145:1706.F17.11.prev qiita_ptid_1145:1706.F17.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271285 SAMEA4359836 1706.F17.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGAGTGCTAATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623441 qiita_ptid_1145:1706.F17.12.prev qiita_ptid_1145:1706.F17.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271286 SAMEA4359837 1706.F17.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCACGGACATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623442 qiita_ptid_1145:1706.F17.13.prev qiita_ptid_1145:1706.F17.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271287 SAMEA4359838 1706.F17.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGAGAGGAGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623443 qiita_ptid_1145:1706.F17.2.prev qiita_ptid_1145:1706.F17.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271288 SAMEA4359839 1706.F17.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTGTACGGATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623444 qiita_ptid_1145:1706.F17.3.prev qiita_ptid_1145:1706.F17.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271289 SAMEA4359840 1706.F17.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCTTCGACAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623445 qiita_ptid_1145:1706.F17.4.prev qiita_ptid_1145:1706.F17.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271290 SAMEA4359841 1706.F17.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACGGCAGTTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623446 qiita_ptid_1145:1706.F17.5.prev qiita_ptid_1145:1706.F17.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271291 SAMEA4359842 1706.F17.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCGGTATGTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623447 qiita_ptid_1145:1706.F17.6.prev qiita_ptid_1145:1706.F17.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271292 SAMEA4359843 1706.F17.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAACAAAGAGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623448 qiita_ptid_1145:1706.F17.7.prev qiita_ptid_1145:1706.F17.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271293 SAMEA4359844 1706.F17.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCTCTAGAAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623449 qiita_ptid_1145:1706.F17.8.prev qiita_ptid_1145:1706.F17.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271294 SAMEA4359845 1706.F17.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATCGCGTTGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623450 qiita_ptid_1145:1706.F17.9.prev qiita_ptid_1145:1706.F17.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271295 SAMEA4359846 1706.F17.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTACCTTACACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F17.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623451 qiita_ptid_1145:1706.F18.0.prev qiita_ptid_1145:1706.F18.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271296 SAMEA4359847 1706.F18.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCTGTCTGCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623452 qiita_ptid_1145:1706.F18.1.prev qiita_ptid_1145:1706.F18.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271297 SAMEA4359848 1706.F18.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTGACCGGTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623453 qiita_ptid_1145:1706.F18.10.prev qiita_ptid_1145:1706.F18.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271298 SAMEA4359849 1706.F18.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGAAGAAGTAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623454 qiita_ptid_1145:1706.F18.11.prev qiita_ptid_1145:1706.F18.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271299 SAMEA4359850 1706.F18.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCTATGAGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623455 qiita_ptid_1145:1706.F18.12.prev qiita_ptid_1145:1706.F18.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271300 SAMEA4359851 1706.F18.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTGCTTAGGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623456 qiita_ptid_1145:1706.F18.13.prev qiita_ptid_1145:1706.F18.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271301 SAMEA4359852 1706.F18.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGACACCGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623457 qiita_ptid_1145:1706.F18.2.prev qiita_ptid_1145:1706.F18.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271302 SAMEA4359853 1706.F18.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCAGTGACTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623458 qiita_ptid_1145:1706.F18.3.prev qiita_ptid_1145:1706.F18.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271303 SAMEA4359854 1706.F18.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCTCCGTAGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623459 qiita_ptid_1145:1706.F18.4.prev qiita_ptid_1145:1706.F18.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271304 SAMEA4359855 1706.F18.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACAGGAGGGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623460 qiita_ptid_1145:1706.F18.5.prev qiita_ptid_1145:1706.F18.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271305 SAMEA4359856 1706.F18.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAACAACAGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623461 qiita_ptid_1145:1706.F18.6.prev qiita_ptid_1145:1706.F18.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271306 SAMEA4359857 1706.F18.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTATGGGCTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623462 qiita_ptid_1145:1706.F18.7.prev qiita_ptid_1145:1706.F18.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271307 SAMEA4359858 1706.F18.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCGATTTACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623463 qiita_ptid_1145:1706.F18.8.prev qiita_ptid_1145:1706.F18.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271308 SAMEA4359859 1706.F18.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGTGACATGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623464 qiita_ptid_1145:1706.F18.9.prev qiita_ptid_1145:1706.F18.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271309 SAMEA4359860 1706.F18.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGACCGGCTGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F18.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623465 qiita_ptid_1145:1706.F19.0.prev qiita_ptid_1145:1706.F19.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271310 SAMEA4359861 1706.F19.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGATAGCCAAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623466 qiita_ptid_1145:1706.F19.1.prev qiita_ptid_1145:1706.F19.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271311 SAMEA4359862 1706.F19.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGAATCCGATTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623467 qiita_ptid_1145:1706.F19.10.prev qiita_ptid_1145:1706.F19.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271312 SAMEA4359863 1706.F19.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTATGTACGGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623468 qiita_ptid_1145:1706.F19.11.prev qiita_ptid_1145:1706.F19.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271313 SAMEA4359864 1706.F19.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGAGTCATACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623469 qiita_ptid_1145:1706.F19.12.prev qiita_ptid_1145:1706.F19.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271314 SAMEA4359865 1706.F19.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTCTCCGTAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623470 qiita_ptid_1145:1706.F19.2.prev qiita_ptid_1145:1706.F19.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271315 SAMEA4359866 1706.F19.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTCGTGCACAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623471 qiita_ptid_1145:1706.F19.3.prev qiita_ptid_1145:1706.F19.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271316 SAMEA4359867 1706.F19.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAAGCGTCTCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623472 qiita_ptid_1145:1706.F19.4.prev qiita_ptid_1145:1706.F19.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271317 SAMEA4359868 1706.F19.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCGGCCTATTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623473 qiita_ptid_1145:1706.F19.5.prev qiita_ptid_1145:1706.F19.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271318 SAMEA4359869 1706.F19.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCGTTAGCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623474 qiita_ptid_1145:1706.F19.6.prev qiita_ptid_1145:1706.F19.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271319 SAMEA4359870 1706.F19.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTCTCGCAAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623475 qiita_ptid_1145:1706.F19.7.prev qiita_ptid_1145:1706.F19.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271320 SAMEA4359871 1706.F19.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCAATCTCGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623476 qiita_ptid_1145:1706.F19.8.prev qiita_ptid_1145:1706.F19.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271321 SAMEA4359872 1706.F19.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGAAGAACGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623477 qiita_ptid_1145:1706.F19.9.prev qiita_ptid_1145:1706.F19.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271322 SAMEA4359873 1706.F19.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGTGTCGGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F19.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623478 qiita_ptid_1145:1706.F2.0.prev qiita_ptid_1145:1706.F2.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271323 SAMEA4359874 1706.F2.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGGTGACTTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623479 qiita_ptid_1145:1706.F2.1.prev qiita_ptid_1145:1706.F2.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271324 SAMEA4359875 1706.F2.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTCGGTGTCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623480 qiita_ptid_1145:1706.F2.10.prev qiita_ptid_1145:1706.F2.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271325 SAMEA4359876 1706.F2.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATACAGACCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623481 qiita_ptid_1145:1706.F2.11.prev qiita_ptid_1145:1706.F2.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271326 SAMEA4359877 1706.F2.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACGCTTTGCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623482 qiita_ptid_1145:1706.F2.12.prev qiita_ptid_1145:1706.F2.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271327 SAMEA4359878 1706.F2.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGAGCAACAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623483 qiita_ptid_1145:1706.F2.13.prev qiita_ptid_1145:1706.F2.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271328 SAMEA4359879 1706.F2.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACCCAGATGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623484 qiita_ptid_1145:1706.F2.2.prev qiita_ptid_1145:1706.F2.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271329 SAMEA4359880 1706.F2.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCATACACTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623485 qiita_ptid_1145:1706.F2.3.prev qiita_ptid_1145:1706.F2.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271330 SAMEA4359881 1706.F2.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCACAGTCGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623486 qiita_ptid_1145:1706.F2.4.prev qiita_ptid_1145:1706.F2.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271331 SAMEA4359882 1706.F2.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGACCGACTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623487 qiita_ptid_1145:1706.F2.5.prev qiita_ptid_1145:1706.F2.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271332 SAMEA4359883 1706.F2.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCTGCGATCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623488 qiita_ptid_1145:1706.F2.6.prev qiita_ptid_1145:1706.F2.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271333 SAMEA4359884 1706.F2.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGGCATCTAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623489 qiita_ptid_1145:1706.F2.7.prev qiita_ptid_1145:1706.F2.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271334 SAMEA4359885 1706.F2.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGTGGATAGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623490 qiita_ptid_1145:1706.F2.8.prev qiita_ptid_1145:1706.F2.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271335 SAMEA4359886 1706.F2.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCTCTCACTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623491 qiita_ptid_1145:1706.F2.9.prev qiita_ptid_1145:1706.F2.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271336 SAMEA4359887 1706.F2.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAATCGGCTTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F2.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623492 qiita_ptid_1145:1706.F20.0.prev qiita_ptid_1145:1706.F20.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271337 SAMEA4359888 1706.F20.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTTCCATTAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623493 qiita_ptid_1145:1706.F20.1.prev qiita_ptid_1145:1706.F20.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271338 SAMEA4359889 1706.F20.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGACAGTAGGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623494 qiita_ptid_1145:1706.F20.10.prev qiita_ptid_1145:1706.F20.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271339 SAMEA4359890 1706.F20.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATCTTGCGCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623495 qiita_ptid_1145:1706.F20.11.prev qiita_ptid_1145:1706.F20.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271340 SAMEA4359891 1706.F20.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGAGAGACAGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623496 qiita_ptid_1145:1706.F20.12.prev qiita_ptid_1145:1706.F20.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271341 SAMEA4359892 1706.F20.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAGAGGTAGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623497 qiita_ptid_1145:1706.F20.13.prev qiita_ptid_1145:1706.F20.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271342 SAMEA4359893 1706.F20.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAAAGAGGAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623498 qiita_ptid_1145:1706.F20.2.prev qiita_ptid_1145:1706.F20.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271343 SAMEA4359894 1706.F20.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCATAGCTCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623499 qiita_ptid_1145:1706.F20.3.prev qiita_ptid_1145:1706.F20.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271344 SAMEA4359895 1706.F20.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCCGAGTAATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623500 qiita_ptid_1145:1706.F20.4.prev qiita_ptid_1145:1706.F20.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271345 SAMEA4359896 1706.F20.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCCCAATATAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623501 qiita_ptid_1145:1706.F20.5.prev qiita_ptid_1145:1706.F20.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271346 SAMEA4359897 1706.F20.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGAATTCGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623502 qiita_ptid_1145:1706.F20.6.prev qiita_ptid_1145:1706.F20.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271347 SAMEA4359898 1706.F20.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAACTAGCGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623503 qiita_ptid_1145:1706.F20.7.prev qiita_ptid_1145:1706.F20.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271348 SAMEA4359899 1706.F20.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAAACTACGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623504 qiita_ptid_1145:1706.F20.8.prev qiita_ptid_1145:1706.F20.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271349 SAMEA4359900 1706.F20.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCCGCAAGTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623505 qiita_ptid_1145:1706.F20.9.prev qiita_ptid_1145:1706.F20.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271350 SAMEA4359901 1706.F20.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGTTATGGCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F20.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623506 qiita_ptid_1145:1706.F21.0.prev qiita_ptid_1145:1706.F21.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271351 SAMEA4359902 1706.F21.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAGATTTCCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623507 qiita_ptid_1145:1706.F21.1.prev qiita_ptid_1145:1706.F21.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271352 SAMEA4359903 1706.F21.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCTGCACCTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1623508 qiita_ptid_1145:1706.F21.10.prev qiita_ptid_1145:1706.F21.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271353 SAMEA4359904 1706.F21.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACAGTCCTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623509 qiita_ptid_1145:1706.F21.11.prev qiita_ptid_1145:1706.F21.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271354 SAMEA4359905 1706.F21.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACAACGAATCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623510 qiita_ptid_1145:1706.F21.12.prev qiita_ptid_1145:1706.F21.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271355 SAMEA4359906 1706.F21.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGCGAACTAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623511 qiita_ptid_1145:1706.F21.13.prev qiita_ptid_1145:1706.F21.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271356 SAMEA4359907 1706.F21.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCATACGACCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1623512 qiita_ptid_1145:1706.F21.2.prev qiita_ptid_1145:1706.F21.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271357 SAMEA4359908 1706.F21.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATGTTCGCTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623513 qiita_ptid_1145:1706.F21.3.prev qiita_ptid_1145:1706.F21.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271358 SAMEA4359909 1706.F21.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGTCTGTCTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623514 qiita_ptid_1145:1706.F21.5.prev qiita_ptid_1145:1706.F21.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271359 SAMEA4359910 1706.F21.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTTGAGGCATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1623515 qiita_ptid_1145:1706.F21.6.prev qiita_ptid_1145:1706.F21.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271360 SAMEA4359911 1706.F21.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTGATACGATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623516 qiita_ptid_1145:1706.F21.7.prev qiita_ptid_1145:1706.F21.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271361 SAMEA4359912 1706.F21.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATGAACGTCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623517 qiita_ptid_1145:1706.F21.8.prev qiita_ptid_1145:1706.F21.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271362 SAMEA4359913 1706.F21.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCACCGTCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623518 qiita_ptid_1145:1706.F21.9.prev qiita_ptid_1145:1706.F21.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271363 SAMEA4359914 1706.F21.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCTCAGTCAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F21.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1623519 qiita_ptid_1145:1706.F22.0.prev qiita_ptid_1145:1706.F22.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271364 SAMEA4359915 1706.F22.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATAGGCCTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623520 qiita_ptid_1145:1706.F22.1.prev qiita_ptid_1145:1706.F22.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271365 SAMEA4359916 1706.F22.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTGACTTAAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1623521 qiita_ptid_1145:1706.F22.10.prev qiita_ptid_1145:1706.F22.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271366 SAMEA4359917 1706.F22.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCCCTTCTCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623522 qiita_ptid_1145:1706.F22.11.prev qiita_ptid_1145:1706.F22.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271367 SAMEA4359918 1706.F22.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAACCCGATAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1623523 qiita_ptid_1145:1706.F22.12.prev qiita_ptid_1145:1706.F22.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271368 SAMEA4359919 1706.F22.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGCAAATCTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1623524 qiita_ptid_1145:1706.F22.13.prev qiita_ptid_1145:1706.F22.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271369 SAMEA4359920 1706.F22.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGAACGACGTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1623525 qiita_ptid_1145:1706.F22.2.prev qiita_ptid_1145:1706.F22.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271370 SAMEA4359921 1706.F22.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTCGAAGATTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623526 qiita_ptid_1145:1706.F22.3.prev qiita_ptid_1145:1706.F22.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271371 SAMEA4359922 1706.F22.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGGCTCGTGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623527 qiita_ptid_1145:1706.F22.4.prev qiita_ptid_1145:1706.F22.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271372 SAMEA4359923 1706.F22.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCTTACGATAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1623528 qiita_ptid_1145:1706.F22.5.prev qiita_ptid_1145:1706.F22.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271373 SAMEA4359924 1706.F22.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATTCCGGCTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1623529 qiita_ptid_1145:1706.F22.6.prev qiita_ptid_1145:1706.F22.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271374 SAMEA4359925 1706.F22.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCGATTAGGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1623530 qiita_ptid_1145:1706.F22.7.prev qiita_ptid_1145:1706.F22.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271375 SAMEA4359926 1706.F22.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTATGGTACGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1623531 qiita_ptid_1145:1706.F22.8.prev qiita_ptid_1145:1706.F22.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271376 SAMEA4359927 1706.F22.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCCGGTAATCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623532 qiita_ptid_1145:1706.F22.9.prev qiita_ptid_1145:1706.F22.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271377 SAMEA4359928 1706.F22.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAGGGACTTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F22.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1623533 qiita_ptid_1145:1706.F23.0.prev qiita_ptid_1145:1706.F23.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271378 SAMEA4359929 1706.F23.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGCTTTCTATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623534 qiita_ptid_1145:1706.F23.1.prev qiita_ptid_1145:1706.F23.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271379 SAMEA4359930 1706.F23.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAACGCTGTGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1623535 qiita_ptid_1145:1706.F23.10.prev qiita_ptid_1145:1706.F23.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271380 SAMEA4359931 1706.F23.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAGACCAACTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623536 qiita_ptid_1145:1706.F23.11.prev qiita_ptid_1145:1706.F23.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271381 SAMEA4359932 1706.F23.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGAGTTCCTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1623537 qiita_ptid_1145:1706.F23.12.prev qiita_ptid_1145:1706.F23.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271382 SAMEA4359933 1706.F23.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTTGTAGTCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1623538 qiita_ptid_1145:1706.F23.13.prev qiita_ptid_1145:1706.F23.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271383 SAMEA4359934 1706.F23.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAGCGTTGTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1623539 qiita_ptid_1145:1706.F23.2.prev qiita_ptid_1145:1706.F23.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271384 SAMEA4359935 1706.F23.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGGCATGCTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623540 qiita_ptid_1145:1706.F23.3.prev qiita_ptid_1145:1706.F23.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271385 SAMEA4359936 1706.F23.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACCTGCGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623541 qiita_ptid_1145:1706.F23.5.prev qiita_ptid_1145:1706.F23.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271386 SAMEA4359937 1706.F23.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGGCTGTCAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1623542 qiita_ptid_1145:1706.F23.6.prev qiita_ptid_1145:1706.F23.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271387 SAMEA4359938 1706.F23.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGCCTCGTAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1623543 qiita_ptid_1145:1706.F23.7.prev qiita_ptid_1145:1706.F23.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271388 SAMEA4359939 1706.F23.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCCACGTGTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1623544 qiita_ptid_1145:1706.F23.8.prev qiita_ptid_1145:1706.F23.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271389 SAMEA4359940 1706.F23.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCCTATAAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623545 qiita_ptid_1145:1706.F23.9.prev qiita_ptid_1145:1706.F23.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271390 SAMEA4359941 1706.F23.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTTGGCCACAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F23.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1623546 qiita_ptid_1145:1706.F24.0.prev qiita_ptid_1145:1706.F24.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271391 SAMEA4359942 1706.F24.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACTACCCGTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1623547 qiita_ptid_1145:1706.F24.1.prev qiita_ptid_1145:1706.F24.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271392 SAMEA4359943 1706.F24.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTACACAGCACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1623548 qiita_ptid_1145:1706.F24.10.prev qiita_ptid_1145:1706.F24.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271393 SAMEA4359944 1706.F24.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGTCGCCAAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1623549 qiita_ptid_1145:1706.F24.11.prev qiita_ptid_1145:1706.F24.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271394 SAMEA4359945 1706.F24.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCCCGAAACGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1623550 qiita_ptid_1145:1706.F24.12.prev qiita_ptid_1145:1706.F24.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271395 SAMEA4359946 1706.F24.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGATCCATCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1623551 qiita_ptid_1145:1706.F24.13.prev qiita_ptid_1145:1706.F24.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271396 SAMEA4359947 1706.F24.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGAGGGCAAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1623552 qiita_ptid_1145:1706.F24.2.prev qiita_ptid_1145:1706.F24.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271397 SAMEA4359948 1706.F24.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTGTTCTGGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1623553 qiita_ptid_1145:1706.F24.3.prev qiita_ptid_1145:1706.F24.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271398 SAMEA4359949 1706.F24.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGGTGATGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1623554 qiita_ptid_1145:1706.F24.4.prev qiita_ptid_1145:1706.F24.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271399 SAMEA4359950 1706.F24.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCATGACAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1623555 qiita_ptid_1145:1706.F24.5.prev qiita_ptid_1145:1706.F24.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271400 SAMEA4359951 1706.F24.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGCTCTATTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1623556 qiita_ptid_1145:1706.F24.6.prev qiita_ptid_1145:1706.F24.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271401 SAMEA4359952 1706.F24.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCGAAGTTTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1623557 qiita_ptid_1145:1706.F24.7.prev qiita_ptid_1145:1706.F24.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271402 SAMEA4359953 1706.F24.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGCTGCAACAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1623558 qiita_ptid_1145:1706.F24.9.prev qiita_ptid_1145:1706.F24.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271403 SAMEA4359954 1706.F24.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGCTAGCAGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F24.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1623559 qiita_ptid_1145:1706.F27.0.prev qiita_ptid_1145:1706.F27.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271404 SAMEA4359955 1706.F27.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGAAGGGCGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1623560 qiita_ptid_1145:1706.F27.1.prev qiita_ptid_1145:1706.F27.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271405 SAMEA4359956 1706.F27.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGATAACCTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1623561 qiita_ptid_1145:1706.F27.10.prev qiita_ptid_1145:1706.F27.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271406 SAMEA4359957 1706.F27.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATCTGGGCAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1623562 qiita_ptid_1145:1706.F27.11.prev qiita_ptid_1145:1706.F27.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271407 SAMEA4359958 1706.F27.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGCGGGTTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1623563 qiita_ptid_1145:1706.F27.12.prev qiita_ptid_1145:1706.F27.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271408 SAMEA4359959 1706.F27.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGAGCGAAGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1623564 qiita_ptid_1145:1706.F27.13.prev qiita_ptid_1145:1706.F27.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271409 SAMEA4359960 1706.F27.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTATAAATGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1623565 qiita_ptid_1145:1706.F27.2.prev qiita_ptid_1145:1706.F27.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271410 SAMEA4359961 1706.F27.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCACCAGGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1623566 qiita_ptid_1145:1706.F27.3.prev qiita_ptid_1145:1706.F27.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271411 SAMEA4359962 1706.F27.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATACGCATCAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1623567 qiita_ptid_1145:1706.F27.4.prev qiita_ptid_1145:1706.F27.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271412 SAMEA4359963 1706.F27.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCTAGAAGAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1623568 qiita_ptid_1145:1706.F27.5.prev qiita_ptid_1145:1706.F27.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271413 SAMEA4359964 1706.F27.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATTGTGTCGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1623569 qiita_ptid_1145:1706.F27.6.prev qiita_ptid_1145:1706.F27.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271414 SAMEA4359965 1706.F27.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTAAGTGATGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1623570 qiita_ptid_1145:1706.F27.7.prev qiita_ptid_1145:1706.F27.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271415 SAMEA4359966 1706.F27.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCATCGACGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1623571 qiita_ptid_1145:1706.F27.8.prev qiita_ptid_1145:1706.F27.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271416 SAMEA4359967 1706.F27.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCACATAGTCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1623572 qiita_ptid_1145:1706.F27.9.prev qiita_ptid_1145:1706.F27.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271417 SAMEA4359968 1706.F27.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGACTAATGGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F27.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1623573 qiita_ptid_1145:1706.F28.0.prev qiita_ptid_1145:1706.F28.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271418 SAMEA4359969 1706.F28.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTGATGGCCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1623574 qiita_ptid_1145:1706.F28.1.prev qiita_ptid_1145:1706.F28.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271419 SAMEA4359970 1706.F28.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCTCCATCACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1623575 qiita_ptid_1145:1706.F28.10.prev qiita_ptid_1145:1706.F28.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271420 SAMEA4359971 1706.F28.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCGATCCACAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1623576 qiita_ptid_1145:1706.F28.11.prev qiita_ptid_1145:1706.F28.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271421 SAMEA4359972 1706.F28.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAACCTATGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1623577 qiita_ptid_1145:1706.F28.12.prev qiita_ptid_1145:1706.F28.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271422 SAMEA4359973 1706.F28.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACCGAAGGTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1623578 qiita_ptid_1145:1706.F28.13.prev qiita_ptid_1145:1706.F28.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271423 SAMEA4359974 1706.F28.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGACAAGCTTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1623579 qiita_ptid_1145:1706.F28.2.prev qiita_ptid_1145:1706.F28.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271424 SAMEA4359975 1706.F28.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAATACCAAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1623580 qiita_ptid_1145:1706.F28.3.prev qiita_ptid_1145:1706.F28.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271425 SAMEA4359976 1706.F28.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGATAGGTACAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1623581 qiita_ptid_1145:1706.F28.4.prev qiita_ptid_1145:1706.F28.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271426 SAMEA4359977 1706.F28.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTGTCGTCAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1623582 qiita_ptid_1145:1706.F28.5.prev qiita_ptid_1145:1706.F28.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271427 SAMEA4359978 1706.F28.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAACACCATCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1623583 qiita_ptid_1145:1706.F28.6.prev qiita_ptid_1145:1706.F28.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271428 SAMEA4359979 1706.F28.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCATTGAGTTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1623584 qiita_ptid_1145:1706.F28.7.prev qiita_ptid_1145:1706.F28.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271429 SAMEA4359980 1706.F28.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAAGGCATCGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1623585 qiita_ptid_1145:1706.F28.8.prev qiita_ptid_1145:1706.F28.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271430 SAMEA4359981 1706.F28.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACAGTTGAAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1623586 qiita_ptid_1145:1706.F28.9.prev qiita_ptid_1145:1706.F28.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271431 SAMEA4359982 1706.F28.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGAGGAGCAATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F28.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1623587 qiita_ptid_1145:1706.F29.0.prev qiita_ptid_1145:1706.F29.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271432 SAMEA4359983 1706.F29.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGTTGGTTACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1623588 qiita_ptid_1145:1706.F29.1.prev qiita_ptid_1145:1706.F29.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271433 SAMEA4359984 1706.F29.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACCCGATGGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1623589 qiita_ptid_1145:1706.F29.10.prev qiita_ptid_1145:1706.F29.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271434 SAMEA4359985 1706.F29.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGACGTCCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1623590 qiita_ptid_1145:1706.F29.11.prev qiita_ptid_1145:1706.F29.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271435 SAMEA4359986 1706.F29.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGCCGTTACTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1623591 qiita_ptid_1145:1706.F29.12.prev qiita_ptid_1145:1706.F29.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271436 SAMEA4359987 1706.F29.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTAAGCTGACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1623592 qiita_ptid_1145:1706.F29.13.prev qiita_ptid_1145:1706.F29.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271437 SAMEA4359988 1706.F29.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGATACAGTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1623593 qiita_ptid_1145:1706.F29.2.prev qiita_ptid_1145:1706.F29.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271438 SAMEA4359989 1706.F29.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTATCTGCGCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1623594 qiita_ptid_1145:1706.F29.3.prev qiita_ptid_1145:1706.F29.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271439 SAMEA4359990 1706.F29.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAGCTTCGTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1623595 qiita_ptid_1145:1706.F29.4.prev qiita_ptid_1145:1706.F29.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271440 SAMEA4359991 1706.F29.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTTCAACTACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1623596 qiita_ptid_1145:1706.F29.5.prev qiita_ptid_1145:1706.F29.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271441 SAMEA4359992 1706.F29.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACGAGCCCTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1623597 qiita_ptid_1145:1706.F29.6.prev qiita_ptid_1145:1706.F29.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271442 SAMEA4359993 1706.F29.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGCCGCATATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1623598 qiita_ptid_1145:1706.F29.7.prev qiita_ptid_1145:1706.F29.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271443 SAMEA4359994 1706.F29.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATCCAAGCGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1623599 qiita_ptid_1145:1706.F29.8.prev qiita_ptid_1145:1706.F29.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271444 SAMEA4359995 1706.F29.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTAGACACTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1623600 qiita_ptid_1145:1706.F29.9.prev qiita_ptid_1145:1706.F29.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271445 SAMEA4359996 1706.F29.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGAGCTCTGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F29.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1623601 qiita_ptid_1145:1706.F3.0.prev qiita_ptid_1145:1706.F3.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271446 SAMEA4359997 1706.F3.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTAGGTAGAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623602 qiita_ptid_1145:1706.F3.1.prev qiita_ptid_1145:1706.F3.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271447 SAMEA4359998 1706.F3.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAATGCGTAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623603 qiita_ptid_1145:1706.F3.10.prev qiita_ptid_1145:1706.F3.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271448 SAMEA4359999 1706.F3.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCGCAACCTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623604 qiita_ptid_1145:1706.F3.11.prev qiita_ptid_1145:1706.F3.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271449 SAMEA4360000 1706.F3.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGCCGGTAATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623605 qiita_ptid_1145:1706.F3.12.prev qiita_ptid_1145:1706.F3.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271450 SAMEA4360001 1706.F3.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTGCGAAGTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623606 qiita_ptid_1145:1706.F3.13.prev qiita_ptid_1145:1706.F3.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271451 SAMEA4360002 1706.F3.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGAGCTACTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623607 qiita_ptid_1145:1706.F3.2.prev qiita_ptid_1145:1706.F3.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271452 SAMEA4360003 1706.F3.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGATATATCGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623608 qiita_ptid_1145:1706.F3.3.prev qiita_ptid_1145:1706.F3.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271453 SAMEA4360004 1706.F3.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAGAGGCCATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623609 qiita_ptid_1145:1706.F3.4.prev qiita_ptid_1145:1706.F3.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271454 SAMEA4360005 1706.F3.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAAATCAGCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623610 qiita_ptid_1145:1706.F3.5.prev qiita_ptid_1145:1706.F3.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271455 SAMEA4360006 1706.F3.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCATATGCACTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623611 qiita_ptid_1145:1706.F3.6.prev qiita_ptid_1145:1706.F3.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271456 SAMEA4360007 1706.F3.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCTTACCGACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623612 qiita_ptid_1145:1706.F3.7.prev qiita_ptid_1145:1706.F3.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271457 SAMEA4360008 1706.F3.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCTTCTGATCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623613 qiita_ptid_1145:1706.F3.8.prev qiita_ptid_1145:1706.F3.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271458 SAMEA4360009 1706.F3.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCGACGAAGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623614 qiita_ptid_1145:1706.F3.9.prev qiita_ptid_1145:1706.F3.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271459 SAMEA4360010 1706.F3.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACAGTTACGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F3.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623615 qiita_ptid_1145:1706.F30.0.prev qiita_ptid_1145:1706.F30.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271460 SAMEA4360011 1706.F30.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTTCCCAGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1623616 qiita_ptid_1145:1706.F30.1.prev qiita_ptid_1145:1706.F30.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271461 SAMEA4360012 1706.F30.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCACGACTTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1623617 qiita_ptid_1145:1706.F30.10.prev qiita_ptid_1145:1706.F30.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271462 SAMEA4360013 1706.F30.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTATACGGCGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1623618 qiita_ptid_1145:1706.F30.12.prev qiita_ptid_1145:1706.F30.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271463 SAMEA4360014 1706.F30.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTGATCCGCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1623619 qiita_ptid_1145:1706.F30.13.prev qiita_ptid_1145:1706.F30.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271464 SAMEA4360015 1706.F30.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGCCGAATCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1623620 qiita_ptid_1145:1706.F30.2.prev qiita_ptid_1145:1706.F30.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271465 SAMEA4360016 1706.F30.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGACATCTCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1623621 qiita_ptid_1145:1706.F30.3.prev qiita_ptid_1145:1706.F30.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271466 SAMEA4360017 1706.F30.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCTTGACAAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1623622 qiita_ptid_1145:1706.F30.4.prev qiita_ptid_1145:1706.F30.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271467 SAMEA4360018 1706.F30.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGTATGACAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1623623 qiita_ptid_1145:1706.F30.5.prev qiita_ptid_1145:1706.F30.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271468 SAMEA4360019 1706.F30.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATTCGTGGCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1623624 qiita_ptid_1145:1706.F30.6.prev qiita_ptid_1145:1706.F30.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271469 SAMEA4360020 1706.F30.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCGAGTCACCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1623625 qiita_ptid_1145:1706.F30.7.prev qiita_ptid_1145:1706.F30.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271470 SAMEA4360021 1706.F30.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGGACCAGCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1623626 qiita_ptid_1145:1706.F30.8.prev qiita_ptid_1145:1706.F30.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271471 SAMEA4360022 1706.F30.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTAGAGCTCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1623627 qiita_ptid_1145:1706.F30.9.prev qiita_ptid_1145:1706.F30.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271472 SAMEA4360023 1706.F30.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAGGTTCTGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F30.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1623628 qiita_ptid_1145:1706.F31.0.prev qiita_ptid_1145:1706.F31.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271473 SAMEA4360024 1706.F31.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGATGATCAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1623629 qiita_ptid_1145:1706.F31.1.prev qiita_ptid_1145:1706.F31.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271474 SAMEA4360025 1706.F31.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTTGACCGATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1623630 qiita_ptid_1145:1706.F31.10.prev qiita_ptid_1145:1706.F31.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271475 SAMEA4360026 1706.F31.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGAAATCCCATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1623631 qiita_ptid_1145:1706.F31.11.prev qiita_ptid_1145:1706.F31.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271476 SAMEA4360027 1706.F31.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCGGTTGACTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1623632 qiita_ptid_1145:1706.F31.12.prev qiita_ptid_1145:1706.F31.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271477 SAMEA4360028 1706.F31.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCTATGTATGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1623633 qiita_ptid_1145:1706.F31.13.prev qiita_ptid_1145:1706.F31.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271478 SAMEA4360029 1706.F31.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCTCGTACTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1623634 qiita_ptid_1145:1706.F31.2.prev qiita_ptid_1145:1706.F31.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271479 SAMEA4360030 1706.F31.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTATCTCCTGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1623635 qiita_ptid_1145:1706.F31.3.prev qiita_ptid_1145:1706.F31.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271480 SAMEA4360031 1706.F31.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTACATGTCGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1623636 qiita_ptid_1145:1706.F31.4.prev qiita_ptid_1145:1706.F31.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271481 SAMEA4360032 1706.F31.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCAAGCTAAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1623637 qiita_ptid_1145:1706.F31.5.prev qiita_ptid_1145:1706.F31.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271482 SAMEA4360033 1706.F31.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACAATAGACACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1623638 qiita_ptid_1145:1706.F31.6.prev qiita_ptid_1145:1706.F31.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271483 SAMEA4360034 1706.F31.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGACACTTCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1623639 qiita_ptid_1145:1706.F31.7.prev qiita_ptid_1145:1706.F31.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271484 SAMEA4360035 1706.F31.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCACATTGGGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1623640 qiita_ptid_1145:1706.F31.8.prev qiita_ptid_1145:1706.F31.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271485 SAMEA4360036 1706.F31.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCTACAGACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1623641 qiita_ptid_1145:1706.F31.9.prev qiita_ptid_1145:1706.F31.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271486 SAMEA4360037 1706.F31.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGACCAAACAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F31.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1623642 qiita_ptid_1145:1706.F32.0.prev qiita_ptid_1145:1706.F32.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271487 SAMEA4360038 1706.F32.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATGACCTCGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1623643 qiita_ptid_1145:1706.F32.1.prev qiita_ptid_1145:1706.F32.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271488 SAMEA4360039 1706.F32.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATGCTGCCGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1623644 qiita_ptid_1145:1706.F32.10.prev qiita_ptid_1145:1706.F32.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271489 SAMEA4360040 1706.F32.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATTTGACGACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1623645 qiita_ptid_1145:1706.F32.11.prev qiita_ptid_1145:1706.F32.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271490 SAMEA4360041 1706.F32.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTGCTAACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1623646 qiita_ptid_1145:1706.F32.12.prev qiita_ptid_1145:1706.F32.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271491 SAMEA4360042 1706.F32.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACCTTACCTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1623647 qiita_ptid_1145:1706.F32.13.prev qiita_ptid_1145:1706.F32.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271492 SAMEA4360043 1706.F32.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTCAGCTGTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1623648 qiita_ptid_1145:1706.F32.2.prev qiita_ptid_1145:1706.F32.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271493 SAMEA4360044 1706.F32.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGCTTACGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1623649 qiita_ptid_1145:1706.F32.3.prev qiita_ptid_1145:1706.F32.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271494 SAMEA4360045 1706.F32.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCCTTAAGGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1623650 qiita_ptid_1145:1706.F32.4.prev qiita_ptid_1145:1706.F32.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271495 SAMEA4360046 1706.F32.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACCTGTGTCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1623651 qiita_ptid_1145:1706.F32.5.prev qiita_ptid_1145:1706.F32.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271496 SAMEA4360047 1706.F32.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTAATTGCCGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1623652 qiita_ptid_1145:1706.F32.6.prev qiita_ptid_1145:1706.F32.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271497 SAMEA4360048 1706.F32.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGTGCTGCTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1623653 qiita_ptid_1145:1706.F32.7.prev qiita_ptid_1145:1706.F32.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271498 SAMEA4360049 1706.F32.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTAGTTATGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1623654 qiita_ptid_1145:1706.F32.8.prev qiita_ptid_1145:1706.F32.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271499 SAMEA4360050 1706.F32.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGATGCCTTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1623655 qiita_ptid_1145:1706.F32.9.prev qiita_ptid_1145:1706.F32.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271500 SAMEA4360051 1706.F32.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAATCCTTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F32.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1623656 qiita_ptid_1145:1706.F33.0.prev qiita_ptid_1145:1706.F33.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271501 SAMEA4360052 1706.F33.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACAGCTCAAACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1623657 qiita_ptid_1145:1706.F33.1.prev qiita_ptid_1145:1706.F33.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271502 SAMEA4360053 1706.F33.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTGAGGTTGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623658 qiita_ptid_1145:1706.F33.10.prev qiita_ptid_1145:1706.F33.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271503 SAMEA4360054 1706.F33.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTGATGTGACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1623659 qiita_ptid_1145:1706.F33.11.prev qiita_ptid_1145:1706.F33.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271504 SAMEA4360055 1706.F33.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCCGAATCGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1623660 qiita_ptid_1145:1706.F33.12.prev qiita_ptid_1145:1706.F33.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271505 SAMEA4360056 1706.F33.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGTCAAACCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1623661 qiita_ptid_1145:1706.F33.13.prev qiita_ptid_1145:1706.F33.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271506 SAMEA4360057 1706.F33.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTACCAGATCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623662 qiita_ptid_1145:1706.F33.2.prev qiita_ptid_1145:1706.F33.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271507 SAMEA4360058 1706.F33.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACTAGTTCAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1623663 qiita_ptid_1145:1706.F33.3.prev qiita_ptid_1145:1706.F33.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271508 SAMEA4360059 1706.F33.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCGTTGCATTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1623664 qiita_ptid_1145:1706.F33.4.prev qiita_ptid_1145:1706.F33.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271509 SAMEA4360060 1706.F33.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTACCGATTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623665 qiita_ptid_1145:1706.F33.5.prev qiita_ptid_1145:1706.F33.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271510 SAMEA4360061 1706.F33.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACCGCTTCTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623666 qiita_ptid_1145:1706.F33.6.prev qiita_ptid_1145:1706.F33.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271511 SAMEA4360062 1706.F33.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCTATGGTGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1623667 qiita_ptid_1145:1706.F33.7.prev qiita_ptid_1145:1706.F33.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271512 SAMEA4360063 1706.F33.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAACCGATTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1623668 qiita_ptid_1145:1706.F33.8.prev qiita_ptid_1145:1706.F33.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271513 SAMEA4360064 1706.F33.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCATTTCATGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1623669 qiita_ptid_1145:1706.F33.9.prev qiita_ptid_1145:1706.F33.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271514 SAMEA4360065 1706.F33.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACCGAAATCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F33.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A1 ERX1623670 qiita_ptid_1145:1706.F34.0.prev qiita_ptid_1145:1706.F34.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271515 SAMEA4360066 1706.F34.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGTTGCAAACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1623671 qiita_ptid_1145:1706.F34.1.prev qiita_ptid_1145:1706.F34.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271516 SAMEA4360067 1706.F34.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCAACTGCAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623672 qiita_ptid_1145:1706.F34.10.prev qiita_ptid_1145:1706.F34.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271517 SAMEA4360068 1706.F34.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACATGCATGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1623673 qiita_ptid_1145:1706.F34.11.prev qiita_ptid_1145:1706.F34.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271518 SAMEA4360069 1706.F34.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAACTTTAGCGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1623674 qiita_ptid_1145:1706.F34.12.prev qiita_ptid_1145:1706.F34.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271519 SAMEA4360070 1706.F34.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATGTGCCGGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1623675 qiita_ptid_1145:1706.F34.13.prev qiita_ptid_1145:1706.F34.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271520 SAMEA4360071 1706.F34.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTAAGCGCCTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623676 qiita_ptid_1145:1706.F34.2.prev qiita_ptid_1145:1706.F34.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271521 SAMEA4360072 1706.F34.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGACTTCCAGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1623677 qiita_ptid_1145:1706.F34.3.prev qiita_ptid_1145:1706.F34.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271522 SAMEA4360073 1706.F34.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTTCGTTCAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1623678 qiita_ptid_1145:1706.F34.4.prev qiita_ptid_1145:1706.F34.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271523 SAMEA4360074 1706.F34.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGTCCGTTGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623679 qiita_ptid_1145:1706.F34.5.prev qiita_ptid_1145:1706.F34.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271524 SAMEA4360075 1706.F34.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCACACCTGATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623680 qiita_ptid_1145:1706.F34.6.prev qiita_ptid_1145:1706.F34.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271525 SAMEA4360076 1706.F34.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATACACTGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1623681 qiita_ptid_1145:1706.F34.7.prev qiita_ptid_1145:1706.F34.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271526 SAMEA4360077 1706.F34.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCTCATGGAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1623682 qiita_ptid_1145:1706.F34.8.prev qiita_ptid_1145:1706.F34.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271527 SAMEA4360078 1706.F34.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGACGTTAACTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1623683 qiita_ptid_1145:1706.F34.9.prev qiita_ptid_1145:1706.F34.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271528 SAMEA4360079 1706.F34.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATGGTACCCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F34.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B1 ERX1623684 qiita_ptid_1145:1706.F35.0.prev qiita_ptid_1145:1706.F35.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271529 SAMEA4360080 1706.F35.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCTCACAGAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623685 qiita_ptid_1145:1706.F35.1.prev qiita_ptid_1145:1706.F35.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271530 SAMEA4360081 1706.F35.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAATTGCCGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623686 qiita_ptid_1145:1706.F35.10.prev qiita_ptid_1145:1706.F35.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271531 SAMEA4360082 1706.F35.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTCCGTGGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623687 qiita_ptid_1145:1706.F35.11.prev qiita_ptid_1145:1706.F35.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271532 SAMEA4360083 1706.F35.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGATGGTCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623688 qiita_ptid_1145:1706.F35.12.prev qiita_ptid_1145:1706.F35.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271533 SAMEA4360084 1706.F35.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCTACCGAAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623689 qiita_ptid_1145:1706.F35.13.prev qiita_ptid_1145:1706.F35.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271534 SAMEA4360085 1706.F35.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTATGACGGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623690 qiita_ptid_1145:1706.F35.2.prev qiita_ptid_1145:1706.F35.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271535 SAMEA4360086 1706.F35.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGTCAACGATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623691 qiita_ptid_1145:1706.F35.3.prev qiita_ptid_1145:1706.F35.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271536 SAMEA4360087 1706.F35.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGATGTCCGTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623692 qiita_ptid_1145:1706.F35.4.prev qiita_ptid_1145:1706.F35.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271537 SAMEA4360088 1706.F35.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGAACCGTCATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623693 qiita_ptid_1145:1706.F35.5.prev qiita_ptid_1145:1706.F35.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271538 SAMEA4360089 1706.F35.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTAGCGGAAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623694 qiita_ptid_1145:1706.F35.6.prev qiita_ptid_1145:1706.F35.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271539 SAMEA4360090 1706.F35.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGGGACAAGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623695 qiita_ptid_1145:1706.F35.7.prev qiita_ptid_1145:1706.F35.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271540 SAMEA4360091 1706.F35.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATGTGTGGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1623696 qiita_ptid_1145:1706.F35.8.prev qiita_ptid_1145:1706.F35.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271541 SAMEA4360092 1706.F35.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCAAATACACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1623697 qiita_ptid_1145:1706.F35.9.prev qiita_ptid_1145:1706.F35.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271542 SAMEA4360093 1706.F35.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACCAACACCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F35.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C1 ERX1623698 qiita_ptid_1145:1706.F36.0.prev qiita_ptid_1145:1706.F36.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271543 SAMEA4360094 1706.F36.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCGATGCCGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623699 qiita_ptid_1145:1706.F36.1.prev qiita_ptid_1145:1706.F36.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271544 SAMEA4360095 1706.F36.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGATCGCCTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623700 qiita_ptid_1145:1706.F36.10.prev qiita_ptid_1145:1706.F36.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271545 SAMEA4360096 1706.F36.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACCGCACAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623701 qiita_ptid_1145:1706.F36.11.prev qiita_ptid_1145:1706.F36.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271546 SAMEA4360097 1706.F36.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCGCTTAAGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623702 qiita_ptid_1145:1706.F36.12.prev qiita_ptid_1145:1706.F36.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271547 SAMEA4360098 1706.F36.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACTCATCATTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623703 qiita_ptid_1145:1706.F36.13.prev qiita_ptid_1145:1706.F36.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271548 SAMEA4360099 1706.F36.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAATGATAAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623704 qiita_ptid_1145:1706.F36.2.prev qiita_ptid_1145:1706.F36.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271549 SAMEA4360100 1706.F36.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAGATCGTGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623705 qiita_ptid_1145:1706.F36.3.prev qiita_ptid_1145:1706.F36.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271550 SAMEA4360101 1706.F36.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAGTTCATCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623706 qiita_ptid_1145:1706.F36.4.prev qiita_ptid_1145:1706.F36.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271551 SAMEA4360102 1706.F36.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTAGTATAGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623707 qiita_ptid_1145:1706.F36.5.prev qiita_ptid_1145:1706.F36.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271552 SAMEA4360103 1706.F36.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCTCGAGCGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623708 qiita_ptid_1145:1706.F36.6.prev qiita_ptid_1145:1706.F36.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271553 SAMEA4360104 1706.F36.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTGCTGAGTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623709 qiita_ptid_1145:1706.F36.7.prev qiita_ptid_1145:1706.F36.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271554 SAMEA4360105 1706.F36.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCCATACAGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1623710 qiita_ptid_1145:1706.F36.8.prev qiita_ptid_1145:1706.F36.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271555 SAMEA4360106 1706.F36.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTAGGATCACTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1623711 qiita_ptid_1145:1706.F36.9.prev qiita_ptid_1145:1706.F36.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271556 SAMEA4360107 1706.F36.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACATACTGAGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F36.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623712 qiita_ptid_1145:1706.F37.0.prev qiita_ptid_1145:1706.F37.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271557 SAMEA4360108 1706.F37.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCGTCCAAATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623713 qiita_ptid_1145:1706.F37.1.prev qiita_ptid_1145:1706.F37.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271558 SAMEA4360109 1706.F37.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAGGCTGTAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623714 qiita_ptid_1145:1706.F37.10.prev qiita_ptid_1145:1706.F37.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271559 SAMEA4360110 1706.F37.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCAGGGCTATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623715 qiita_ptid_1145:1706.F37.11.prev qiita_ptid_1145:1706.F37.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271560 SAMEA4360111 1706.F37.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGAGCTGCCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623716 qiita_ptid_1145:1706.F37.12.prev qiita_ptid_1145:1706.F37.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271561 SAMEA4360112 1706.F37.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGCCATGCCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623717 qiita_ptid_1145:1706.F37.13.prev qiita_ptid_1145:1706.F37.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271562 SAMEA4360113 1706.F37.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAATGACCGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623718 qiita_ptid_1145:1706.F37.2.prev qiita_ptid_1145:1706.F37.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271563 SAMEA4360114 1706.F37.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAGGGAAAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623719 qiita_ptid_1145:1706.F37.3.prev qiita_ptid_1145:1706.F37.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271564 SAMEA4360115 1706.F37.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGGATCAAATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623720 qiita_ptid_1145:1706.F37.4.prev qiita_ptid_1145:1706.F37.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271565 SAMEA4360116 1706.F37.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCACTGGCATAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623721 qiita_ptid_1145:1706.F37.5.prev qiita_ptid_1145:1706.F37.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271566 SAMEA4360117 1706.F37.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTAGAGCCATGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623722 qiita_ptid_1145:1706.F37.6.prev qiita_ptid_1145:1706.F37.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271567 SAMEA4360118 1706.F37.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATACGTTCGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623723 qiita_ptid_1145:1706.F37.7.prev qiita_ptid_1145:1706.F37.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271568 SAMEA4360119 1706.F37.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATAGCATGTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623724 qiita_ptid_1145:1706.F37.8.prev qiita_ptid_1145:1706.F37.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271569 SAMEA4360120 1706.F37.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGATTGAACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1623725 qiita_ptid_1145:1706.F37.9.prev qiita_ptid_1145:1706.F37.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271570 SAMEA4360121 1706.F37.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAATGAGTCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F37.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623726 qiita_ptid_1145:1706.F38.0.prev qiita_ptid_1145:1706.F38.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271571 SAMEA4360122 1706.F38.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGAGGTATAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623727 qiita_ptid_1145:1706.F38.1.prev qiita_ptid_1145:1706.F38.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271572 SAMEA4360123 1706.F38.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTGACGAGGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1623728 qiita_ptid_1145:1706.F38.10.prev qiita_ptid_1145:1706.F38.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271573 SAMEA4360124 1706.F38.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACCGTCAATAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623729 qiita_ptid_1145:1706.F38.11.prev qiita_ptid_1145:1706.F38.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271574 SAMEA4360125 1706.F38.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTCAGGACTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623730 qiita_ptid_1145:1706.F38.12.prev qiita_ptid_1145:1706.F38.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271575 SAMEA4360126 1706.F38.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTTATTTGGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623731 qiita_ptid_1145:1706.F38.13.prev qiita_ptid_1145:1706.F38.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271576 SAMEA4360127 1706.F38.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCTCATATGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1623732 qiita_ptid_1145:1706.F38.2.prev qiita_ptid_1145:1706.F38.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271577 SAMEA4360128 1706.F38.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAACACTTTGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623733 qiita_ptid_1145:1706.F38.3.prev qiita_ptid_1145:1706.F38.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271578 SAMEA4360129 1706.F38.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAACCACCACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623734 qiita_ptid_1145:1706.F38.4.prev qiita_ptid_1145:1706.F38.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271579 SAMEA4360130 1706.F38.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTAGGATCAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1623735 qiita_ptid_1145:1706.F38.5.prev qiita_ptid_1145:1706.F38.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271580 SAMEA4360131 1706.F38.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGTGCGTGTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1623736 qiita_ptid_1145:1706.F38.6.prev qiita_ptid_1145:1706.F38.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271581 SAMEA4360132 1706.F38.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCTCTTTGGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623737 qiita_ptid_1145:1706.F38.7.prev qiita_ptid_1145:1706.F38.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271582 SAMEA4360133 1706.F38.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTACTGAAGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623738 qiita_ptid_1145:1706.F38.8.prev qiita_ptid_1145:1706.F38.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271583 SAMEA4360134 1706.F38.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTCTGAGAGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623739 qiita_ptid_1145:1706.F38.9.prev qiita_ptid_1145:1706.F38.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271584 SAMEA4360135 1706.F38.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATATCAGTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F38.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1623740 qiita_ptid_1145:1706.F39.1.prev qiita_ptid_1145:1706.F39.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271585 SAMEA4360136 1706.F39.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACCGATGTACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1623741 qiita_ptid_1145:1706.F39.10.prev qiita_ptid_1145:1706.F39.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271586 SAMEA4360137 1706.F39.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTCAGATGGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623742 qiita_ptid_1145:1706.F39.11.prev qiita_ptid_1145:1706.F39.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271587 SAMEA4360138 1706.F39.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAGAAGAAAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623743 qiita_ptid_1145:1706.F39.12.prev qiita_ptid_1145:1706.F39.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271588 SAMEA4360139 1706.F39.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGGGTCATCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623744 qiita_ptid_1145:1706.F39.13.prev qiita_ptid_1145:1706.F39.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271589 SAMEA4360140 1706.F39.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATGTTGGAACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1623745 qiita_ptid_1145:1706.F39.2.prev qiita_ptid_1145:1706.F39.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271590 SAMEA4360141 1706.F39.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTCACAGGAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623746 qiita_ptid_1145:1706.F39.3.prev qiita_ptid_1145:1706.F39.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271591 SAMEA4360142 1706.F39.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCTAGAGTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623747 qiita_ptid_1145:1706.F39.4.prev qiita_ptid_1145:1706.F39.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271592 SAMEA4360143 1706.F39.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTCAGCGCGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1623748 qiita_ptid_1145:1706.F39.5.prev qiita_ptid_1145:1706.F39.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271593 SAMEA4360144 1706.F39.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTAAGACAGTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1623749 qiita_ptid_1145:1706.F39.6.prev qiita_ptid_1145:1706.F39.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271594 SAMEA4360145 1706.F39.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCACCATCCGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623750 qiita_ptid_1145:1706.F39.7.prev qiita_ptid_1145:1706.F39.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271595 SAMEA4360146 1706.F39.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAGTCAGATGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623751 qiita_ptid_1145:1706.F39.8.prev qiita_ptid_1145:1706.F39.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271596 SAMEA4360147 1706.F39.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGGCCTGACTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623752 qiita_ptid_1145:1706.F39.9.prev qiita_ptid_1145:1706.F39.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271597 SAMEA4360148 1706.F39.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGGGATACAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F39.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1623753 qiita_ptid_1145:1706.F4.0.prev qiita_ptid_1145:1706.F4.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271598 SAMEA4360149 1706.F4.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCTGAGAGGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623754 qiita_ptid_1145:1706.F4.1.prev qiita_ptid_1145:1706.F4.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271599 SAMEA4360150 1706.F4.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTGTCCTATCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623755 qiita_ptid_1145:1706.F4.10.prev qiita_ptid_1145:1706.F4.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271600 SAMEA4360151 1706.F4.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCATGCATCCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623756 qiita_ptid_1145:1706.F4.11.prev qiita_ptid_1145:1706.F4.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271601 SAMEA4360152 1706.F4.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAACCCGTGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623757 qiita_ptid_1145:1706.F4.12.prev qiita_ptid_1145:1706.F4.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271602 SAMEA4360153 1706.F4.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATGTGGTGTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623758 qiita_ptid_1145:1706.F4.13.prev qiita_ptid_1145:1706.F4.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271603 SAMEA4360154 1706.F4.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACGCCCATCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1623759 qiita_ptid_1145:1706.F4.2.prev qiita_ptid_1145:1706.F4.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271604 SAMEA4360155 1706.F4.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACTACGCTAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623760 qiita_ptid_1145:1706.F4.3.prev qiita_ptid_1145:1706.F4.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271605 SAMEA4360156 1706.F4.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGAATTCGGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623761 qiita_ptid_1145:1706.F4.4.prev qiita_ptid_1145:1706.F4.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271606 SAMEA4360157 1706.F4.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTACCTCTTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623762 qiita_ptid_1145:1706.F4.5.prev qiita_ptid_1145:1706.F4.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271607 SAMEA4360158 1706.F4.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAATACGGATCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623763 qiita_ptid_1145:1706.F4.6.prev qiita_ptid_1145:1706.F4.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271608 SAMEA4360159 1706.F4.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACGACTATAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623764 qiita_ptid_1145:1706.F4.7.prev qiita_ptid_1145:1706.F4.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271609 SAMEA4360160 1706.F4.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTTTGCTTTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1623765 qiita_ptid_1145:1706.F4.8.prev qiita_ptid_1145:1706.F4.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271610 SAMEA4360161 1706.F4.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTCGACTTTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D1 ERX1623766 qiita_ptid_1145:1706.F4.9.prev qiita_ptid_1145:1706.F4.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271611 SAMEA4360162 1706.F4.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGCCTAAGTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F4.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1623767 qiita_ptid_1145:1706.F40.0.prev qiita_ptid_1145:1706.F40.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271612 SAMEA4360163 1706.F40.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTAGGCATGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1623768 qiita_ptid_1145:1706.F40.1.prev qiita_ptid_1145:1706.F40.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271613 SAMEA4360164 1706.F40.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATCGAACACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1623769 qiita_ptid_1145:1706.F40.10.prev qiita_ptid_1145:1706.F40.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271614 SAMEA4360165 1706.F40.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGTGAAGCGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1623770 qiita_ptid_1145:1706.F40.11.prev qiita_ptid_1145:1706.F40.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271615 SAMEA4360166 1706.F40.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTGCGGCAATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1623771 qiita_ptid_1145:1706.F40.12.prev qiita_ptid_1145:1706.F40.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271616 SAMEA4360167 1706.F40.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTAACCTTCCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1623772 qiita_ptid_1145:1706.F40.13.prev qiita_ptid_1145:1706.F40.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271617 SAMEA4360168 1706.F40.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAGATAGTTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1623773 qiita_ptid_1145:1706.F40.2.prev qiita_ptid_1145:1706.F40.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271618 SAMEA4360169 1706.F40.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTCTACCACTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1623774 qiita_ptid_1145:1706.F40.3.prev qiita_ptid_1145:1706.F40.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271619 SAMEA4360170 1706.F40.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCCTGGGTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1623775 qiita_ptid_1145:1706.F40.4.prev qiita_ptid_1145:1706.F40.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271620 SAMEA4360171 1706.F40.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCGTCTTTCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1623776 qiita_ptid_1145:1706.F40.5.prev qiita_ptid_1145:1706.F40.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271621 SAMEA4360172 1706.F40.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGCAACCAATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1623777 qiita_ptid_1145:1706.F40.6.prev qiita_ptid_1145:1706.F40.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271622 SAMEA4360173 1706.F40.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACGTACGAAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1623778 qiita_ptid_1145:1706.F40.7.prev qiita_ptid_1145:1706.F40.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271623 SAMEA4360174 1706.F40.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGATTAACCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1623779 qiita_ptid_1145:1706.F40.8.prev qiita_ptid_1145:1706.F40.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271624 SAMEA4360175 1706.F40.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCAGGCACGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1623780 qiita_ptid_1145:1706.F40.9.prev qiita_ptid_1145:1706.F40.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271625 SAMEA4360176 1706.F40.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGGGCCTTTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F40.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1623781 qiita_ptid_1145:1706.F41.0.prev qiita_ptid_1145:1706.F41.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271626 SAMEA4360177 1706.F41.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGCGTATCCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1623782 qiita_ptid_1145:1706.F41.1.prev qiita_ptid_1145:1706.F41.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271627 SAMEA4360178 1706.F41.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCATTCTCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1623783 qiita_ptid_1145:1706.F41.10.prev qiita_ptid_1145:1706.F41.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271628 SAMEA4360179 1706.F41.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTAGCTACTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1623784 qiita_ptid_1145:1706.F41.11.prev qiita_ptid_1145:1706.F41.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271629 SAMEA4360180 1706.F41.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACCTAGTGAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1623785 qiita_ptid_1145:1706.F41.12.prev qiita_ptid_1145:1706.F41.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271630 SAMEA4360181 1706.F41.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAATCGGTGCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1623786 qiita_ptid_1145:1706.F41.13.prev qiita_ptid_1145:1706.F41.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271631 SAMEA4360182 1706.F41.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGTTTAGACGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1623787 qiita_ptid_1145:1706.F41.2.prev qiita_ptid_1145:1706.F41.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271632 SAMEA4360183 1706.F41.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTCTGCCGAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1623788 qiita_ptid_1145:1706.F41.3.prev qiita_ptid_1145:1706.F41.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271633 SAMEA4360184 1706.F41.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTAGCGTTCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1623789 qiita_ptid_1145:1706.F41.4.prev qiita_ptid_1145:1706.F41.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271634 SAMEA4360185 1706.F41.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCACCCAAGGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1623790 qiita_ptid_1145:1706.F41.5.prev qiita_ptid_1145:1706.F41.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271635 SAMEA4360186 1706.F41.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGCGATAACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1623791 qiita_ptid_1145:1706.F41.6.prev qiita_ptid_1145:1706.F41.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271636 SAMEA4360187 1706.F41.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGTTACAGCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1623792 qiita_ptid_1145:1706.F41.7.prev qiita_ptid_1145:1706.F41.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271637 SAMEA4360188 1706.F41.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATGTGCTTAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1623793 qiita_ptid_1145:1706.F41.8.prev qiita_ptid_1145:1706.F41.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271638 SAMEA4360189 1706.F41.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGGCGATCATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1623794 qiita_ptid_1145:1706.F41.9.prev qiita_ptid_1145:1706.F41.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271639 SAMEA4360190 1706.F41.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGACGTAGAACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F41.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1623795 qiita_ptid_1145:1706.F42.0.prev qiita_ptid_1145:1706.F42.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271640 SAMEA4360191 1706.F42.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACCGCATAAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1623796 qiita_ptid_1145:1706.F42.1.prev qiita_ptid_1145:1706.F42.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271641 SAMEA4360192 1706.F42.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAAAGACCCGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623797 qiita_ptid_1145:1706.F42.10.prev qiita_ptid_1145:1706.F42.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271642 SAMEA4360193 1706.F42.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCTGTTGAGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1623798 qiita_ptid_1145:1706.F42.11.prev qiita_ptid_1145:1706.F42.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271643 SAMEA4360194 1706.F42.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCTTAGAAGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1623799 qiita_ptid_1145:1706.F42.12.prev qiita_ptid_1145:1706.F42.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271644 SAMEA4360195 1706.F42.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGTCGCATCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1623800 qiita_ptid_1145:1706.F42.13.prev qiita_ptid_1145:1706.F42.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271645 SAMEA4360196 1706.F42.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCGGGATTCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623801 qiita_ptid_1145:1706.F42.2.prev qiita_ptid_1145:1706.F42.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271646 SAMEA4360197 1706.F42.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCACAACCGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1623802 qiita_ptid_1145:1706.F42.3.prev qiita_ptid_1145:1706.F42.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271647 SAMEA4360198 1706.F42.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGAAGATTCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1623803 qiita_ptid_1145:1706.F42.4.prev qiita_ptid_1145:1706.F42.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271648 SAMEA4360199 1706.F42.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATAACTGTACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623804 qiita_ptid_1145:1706.F42.5.prev qiita_ptid_1145:1706.F42.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271649 SAMEA4360200 1706.F42.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGACAATTACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623805 qiita_ptid_1145:1706.F42.6.prev qiita_ptid_1145:1706.F42.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271650 SAMEA4360201 1706.F42.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGAAATCCCGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1623806 qiita_ptid_1145:1706.F42.7.prev qiita_ptid_1145:1706.F42.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271651 SAMEA4360202 1706.F42.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATAGTGATTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1623807 qiita_ptid_1145:1706.F42.8.prev qiita_ptid_1145:1706.F42.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271652 SAMEA4360203 1706.F42.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGCAGTTGCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1623808 qiita_ptid_1145:1706.F42.9.prev qiita_ptid_1145:1706.F42.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271653 SAMEA4360204 1706.F42.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGACTTGACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F42.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B2 ERX1623809 qiita_ptid_1145:1706.F43.0.prev qiita_ptid_1145:1706.F43.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271654 SAMEA4360205 1706.F43.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTCGGTAGTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1623810 qiita_ptid_1145:1706.F43.1.prev qiita_ptid_1145:1706.F43.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271655 SAMEA4360206 1706.F43.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCATGTTATCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623811 qiita_ptid_1145:1706.F43.10.prev qiita_ptid_1145:1706.F43.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271656 SAMEA4360207 1706.F43.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTCGGCCAACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1623812 qiita_ptid_1145:1706.F43.11.prev qiita_ptid_1145:1706.F43.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271657 SAMEA4360208 1706.F43.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCACCAATCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1623813 qiita_ptid_1145:1706.F43.12.prev qiita_ptid_1145:1706.F43.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271658 SAMEA4360209 1706.F43.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTTGGTGTAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1623814 qiita_ptid_1145:1706.F43.13.prev qiita_ptid_1145:1706.F43.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271659 SAMEA4360210 1706.F43.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCCTCATGATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623815 qiita_ptid_1145:1706.F43.2.prev qiita_ptid_1145:1706.F43.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271660 SAMEA4360211 1706.F43.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCGCACAGTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1623816 qiita_ptid_1145:1706.F43.3.prev qiita_ptid_1145:1706.F43.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271661 SAMEA4360212 1706.F43.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCACCTGTTGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1623817 qiita_ptid_1145:1706.F43.4.prev qiita_ptid_1145:1706.F43.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271662 SAMEA4360213 1706.F43.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACTGGAACCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623818 qiita_ptid_1145:1706.F43.5.prev qiita_ptid_1145:1706.F43.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271663 SAMEA4360214 1706.F43.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAATTAGGTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623819 qiita_ptid_1145:1706.F43.6.prev qiita_ptid_1145:1706.F43.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271664 SAMEA4360215 1706.F43.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTGTCGATTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1623820 qiita_ptid_1145:1706.F43.7.prev qiita_ptid_1145:1706.F43.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271665 SAMEA4360216 1706.F43.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGAAGTTGGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1623821 qiita_ptid_1145:1706.F43.8.prev qiita_ptid_1145:1706.F43.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271666 SAMEA4360217 1706.F43.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCATGCTCCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1623822 qiita_ptid_1145:1706.F43.9.prev qiita_ptid_1145:1706.F43.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271667 SAMEA4360218 1706.F43.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCATCACATAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F43.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C2 ERX1623823 qiita_ptid_1145:1706.F44.0.prev qiita_ptid_1145:1706.F44.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271668 SAMEA4360219 1706.F44.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGGCTCGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623824 qiita_ptid_1145:1706.F44.1.prev qiita_ptid_1145:1706.F44.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271669 SAMEA4360220 1706.F44.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTACATCGCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623825 qiita_ptid_1145:1706.F44.10.prev qiita_ptid_1145:1706.F44.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271670 SAMEA4360221 1706.F44.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCTCCTCCCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623826 qiita_ptid_1145:1706.F44.11.prev qiita_ptid_1145:1706.F44.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271671 SAMEA4360222 1706.F44.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCATCCAACGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1623827 qiita_ptid_1145:1706.F44.12.prev qiita_ptid_1145:1706.F44.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271672 SAMEA4360223 1706.F44.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTATTTCGGACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1623828 qiita_ptid_1145:1706.F44.13.prev qiita_ptid_1145:1706.F44.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271673 SAMEA4360224 1706.F44.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTAAACCGCGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623829 qiita_ptid_1145:1706.F44.2.prev qiita_ptid_1145:1706.F44.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271674 SAMEA4360225 1706.F44.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAACGTGTGTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623830 qiita_ptid_1145:1706.F44.3.prev qiita_ptid_1145:1706.F44.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271675 SAMEA4360226 1706.F44.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGCAGATTGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623831 qiita_ptid_1145:1706.F44.4.prev qiita_ptid_1145:1706.F44.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271676 SAMEA4360227 1706.F44.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCACGCAATGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623832 qiita_ptid_1145:1706.F44.5.prev qiita_ptid_1145:1706.F44.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271677 SAMEA4360228 1706.F44.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCCAAGCGTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623833 qiita_ptid_1145:1706.F44.6.prev qiita_ptid_1145:1706.F44.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271678 SAMEA4360229 1706.F44.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTATGGTGAACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1623834 qiita_ptid_1145:1706.F44.7.prev qiita_ptid_1145:1706.F44.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271679 SAMEA4360230 1706.F44.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCACTACGCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1623835 qiita_ptid_1145:1706.F44.8.prev qiita_ptid_1145:1706.F44.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271680 SAMEA4360231 1706.F44.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATGACCCAAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1623836 qiita_ptid_1145:1706.F44.9.prev qiita_ptid_1145:1706.F44.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271681 SAMEA4360232 1706.F44.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCTAAACTATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F44.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D2 ERX1623837 qiita_ptid_1145:1706.F45.0.prev qiita_ptid_1145:1706.F45.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271682 SAMEA4360233 1706.F45.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAACGTGCTCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623838 qiita_ptid_1145:1706.F45.1.prev qiita_ptid_1145:1706.F45.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271683 SAMEA4360234 1706.F45.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGTAGCCATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623839 qiita_ptid_1145:1706.F45.10.prev qiita_ptid_1145:1706.F45.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271684 SAMEA4360235 1706.F45.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGTAGAGAGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623840 qiita_ptid_1145:1706.F45.11.prev qiita_ptid_1145:1706.F45.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271685 SAMEA4360236 1706.F45.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCTAGTGGCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623841 qiita_ptid_1145:1706.F45.12.prev qiita_ptid_1145:1706.F45.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271686 SAMEA4360237 1706.F45.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACATTGTCACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623842 qiita_ptid_1145:1706.F45.13.prev qiita_ptid_1145:1706.F45.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271687 SAMEA4360238 1706.F45.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTATCGGAAGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623843 qiita_ptid_1145:1706.F45.2.prev qiita_ptid_1145:1706.F45.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271688 SAMEA4360239 1706.F45.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAATTCGGGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623844 qiita_ptid_1145:1706.F45.3.prev qiita_ptid_1145:1706.F45.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271689 SAMEA4360240 1706.F45.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTCATCGAATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623845 qiita_ptid_1145:1706.F45.4.prev qiita_ptid_1145:1706.F45.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271690 SAMEA4360241 1706.F45.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCATTAGTTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623846 qiita_ptid_1145:1706.F45.5.prev qiita_ptid_1145:1706.F45.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271691 SAMEA4360242 1706.F45.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAACCCTATGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623847 qiita_ptid_1145:1706.F45.6.prev qiita_ptid_1145:1706.F45.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271692 SAMEA4360243 1706.F45.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAAGATTCGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623848 qiita_ptid_1145:1706.F45.7.prev qiita_ptid_1145:1706.F45.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271693 SAMEA4360244 1706.F45.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGCCGTGTACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1623849 qiita_ptid_1145:1706.F45.8.prev qiita_ptid_1145:1706.F45.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271694 SAMEA4360245 1706.F45.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATATACCAGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1623850 qiita_ptid_1145:1706.F45.9.prev qiita_ptid_1145:1706.F45.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271695 SAMEA4360246 1706.F45.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAACGCTAGAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F45.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E2 ERX1623851 qiita_ptid_1145:1706.F46.0.prev qiita_ptid_1145:1706.F46.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271696 SAMEA4360247 1706.F46.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCGTAATTAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623852 qiita_ptid_1145:1706.F46.1.prev qiita_ptid_1145:1706.F46.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271697 SAMEA4360248 1706.F46.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCTGGGAATAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623853 qiita_ptid_1145:1706.F46.10.prev qiita_ptid_1145:1706.F46.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271698 SAMEA4360249 1706.F46.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGAACGGCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623854 qiita_ptid_1145:1706.F46.11.prev qiita_ptid_1145:1706.F46.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271699 SAMEA4360250 1706.F46.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACTTTGGGTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623855 qiita_ptid_1145:1706.F46.12.prev qiita_ptid_1145:1706.F46.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271700 SAMEA4360251 1706.F46.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGATCGTAATAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623856 qiita_ptid_1145:1706.F46.13.prev qiita_ptid_1145:1706.F46.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271701 SAMEA4360252 1706.F46.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAGTATCGCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623857 qiita_ptid_1145:1706.F46.2.prev qiita_ptid_1145:1706.F46.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271702 SAMEA4360253 1706.F46.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGCCATCTGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623858 qiita_ptid_1145:1706.F46.3.prev qiita_ptid_1145:1706.F46.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271703 SAMEA4360254 1706.F46.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATAGCTCGGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623859 qiita_ptid_1145:1706.F46.4.prev qiita_ptid_1145:1706.F46.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271704 SAMEA4360255 1706.F46.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTCCTTAGAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623860 qiita_ptid_1145:1706.F46.5.prev qiita_ptid_1145:1706.F46.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271705 SAMEA4360256 1706.F46.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTATCGCATGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623861 qiita_ptid_1145:1706.F46.7.prev qiita_ptid_1145:1706.F46.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271706 SAMEA4360257 1706.F46.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGAGTAATCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1623862 qiita_ptid_1145:1706.F46.8.prev qiita_ptid_1145:1706.F46.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271707 SAMEA4360258 1706.F46.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTCGATGCAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1623863 qiita_ptid_1145:1706.F46.9.prev qiita_ptid_1145:1706.F46.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271708 SAMEA4360259 1706.F46.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATAAGGGAGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F46.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F2 ERX1623864 qiita_ptid_1145:1706.F47.0.prev qiita_ptid_1145:1706.F47.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271709 SAMEA4360260 1706.F47.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATCACCGGCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623865 qiita_ptid_1145:1706.F47.1.prev qiita_ptid_1145:1706.F47.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271710 SAMEA4360261 1706.F47.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGATTGGCCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623866 qiita_ptid_1145:1706.F47.10.prev qiita_ptid_1145:1706.F47.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271711 SAMEA4360262 1706.F47.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAAACGCGACTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623867 qiita_ptid_1145:1706.F47.11.prev qiita_ptid_1145:1706.F47.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271712 SAMEA4360263 1706.F47.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGGATCTGTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623868 qiita_ptid_1145:1706.F47.12.prev qiita_ptid_1145:1706.F47.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271713 SAMEA4360264 1706.F47.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAACATCCCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623869 qiita_ptid_1145:1706.F47.13.prev qiita_ptid_1145:1706.F47.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271714 SAMEA4360265 1706.F47.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGGGACCTTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623870 qiita_ptid_1145:1706.F47.2.prev qiita_ptid_1145:1706.F47.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271715 SAMEA4360266 1706.F47.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGATGAGCCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623871 qiita_ptid_1145:1706.F47.3.prev qiita_ptid_1145:1706.F47.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271716 SAMEA4360267 1706.F47.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGGATGTTATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623872 qiita_ptid_1145:1706.F47.4.prev qiita_ptid_1145:1706.F47.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271717 SAMEA4360268 1706.F47.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACCCTAGACCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623873 qiita_ptid_1145:1706.F47.5.prev qiita_ptid_1145:1706.F47.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271718 SAMEA4360269 1706.F47.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTGCACTGAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623874 qiita_ptid_1145:1706.F47.6.prev qiita_ptid_1145:1706.F47.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271719 SAMEA4360270 1706.F47.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCCACCACTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623875 qiita_ptid_1145:1706.F47.7.prev qiita_ptid_1145:1706.F47.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271720 SAMEA4360271 1706.F47.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGTCACACACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1623876 qiita_ptid_1145:1706.F47.8.prev qiita_ptid_1145:1706.F47.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271721 SAMEA4360272 1706.F47.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGCACATACAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1623877 qiita_ptid_1145:1706.F47.9.prev qiita_ptid_1145:1706.F47.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271722 SAMEA4360273 1706.F47.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGAGTCTCTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F47.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G2 ERX1623878 qiita_ptid_1145:1706.F48.0.prev qiita_ptid_1145:1706.F48.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271723 SAMEA4360274 1706.F48.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAGATATAGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623879 qiita_ptid_1145:1706.F48.1.prev qiita_ptid_1145:1706.F48.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271724 SAMEA4360275 1706.F48.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATGCCAACATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623880 qiita_ptid_1145:1706.F48.10.prev qiita_ptid_1145:1706.F48.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271725 SAMEA4360276 1706.F48.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCCGCCGTAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623881 qiita_ptid_1145:1706.F48.11.prev qiita_ptid_1145:1706.F48.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271726 SAMEA4360277 1706.F48.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAGGTTTGATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623882 qiita_ptid_1145:1706.F48.12.prev qiita_ptid_1145:1706.F48.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271727 SAMEA4360278 1706.F48.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCCGTATGCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623883 qiita_ptid_1145:1706.F48.13.prev qiita_ptid_1145:1706.F48.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271728 SAMEA4360279 1706.F48.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCGTCAAACTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623884 qiita_ptid_1145:1706.F48.2.prev qiita_ptid_1145:1706.F48.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271729 SAMEA4360280 1706.F48.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTTCCAACTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623885 qiita_ptid_1145:1706.F48.3.prev qiita_ptid_1145:1706.F48.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271730 SAMEA4360281 1706.F48.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAATTCTGCTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623886 qiita_ptid_1145:1706.F48.4.prev qiita_ptid_1145:1706.F48.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271731 SAMEA4360282 1706.F48.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTCTGTCTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623887 qiita_ptid_1145:1706.F48.5.prev qiita_ptid_1145:1706.F48.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271732 SAMEA4360283 1706.F48.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTTGAGCTTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623888 qiita_ptid_1145:1706.F48.6.prev qiita_ptid_1145:1706.F48.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271733 SAMEA4360284 1706.F48.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCACATTCTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623889 qiita_ptid_1145:1706.F48.7.prev qiita_ptid_1145:1706.F48.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271734 SAMEA4360285 1706.F48.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCTGCATACTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1623890 qiita_ptid_1145:1706.F48.8.prev qiita_ptid_1145:1706.F48.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271735 SAMEA4360286 1706.F48.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACGCAGCACTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1623891 qiita_ptid_1145:1706.F48.9.prev qiita_ptid_1145:1706.F48.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271736 SAMEA4360287 1706.F48.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATGAATATCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F48.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H2 ERX1623892 qiita_ptid_1145:1706.F49.0.prev qiita_ptid_1145:1706.F49.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271737 SAMEA4360288 1706.F49.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGGGCGAATGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623893 qiita_ptid_1145:1706.F49.1.prev qiita_ptid_1145:1706.F49.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271738 SAMEA4360289 1706.F49.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGACATACCGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623894 qiita_ptid_1145:1706.F49.10.prev qiita_ptid_1145:1706.F49.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271739 SAMEA4360290 1706.F49.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGGTCCATAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623895 qiita_ptid_1145:1706.F49.11.prev qiita_ptid_1145:1706.F49.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271740 SAMEA4360291 1706.F49.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTTCTGGTGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623896 qiita_ptid_1145:1706.F49.12.prev qiita_ptid_1145:1706.F49.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271741 SAMEA4360292 1706.F49.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGATCCGGTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623897 qiita_ptid_1145:1706.F49.13.prev qiita_ptid_1145:1706.F49.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271742 SAMEA4360293 1706.F49.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACATGTCACGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623898 qiita_ptid_1145:1706.F49.2.prev qiita_ptid_1145:1706.F49.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271743 SAMEA4360294 1706.F49.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCATGTCCCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623899 qiita_ptid_1145:1706.F49.3.prev qiita_ptid_1145:1706.F49.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271744 SAMEA4360295 1706.F49.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCGACAAAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623900 qiita_ptid_1145:1706.F49.4.prev qiita_ptid_1145:1706.F49.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271745 SAMEA4360296 1706.F49.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCCAGTCATAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623901 qiita_ptid_1145:1706.F49.5.prev qiita_ptid_1145:1706.F49.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271746 SAMEA4360297 1706.F49.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATTATCGACGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623902 qiita_ptid_1145:1706.F49.6.prev qiita_ptid_1145:1706.F49.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271747 SAMEA4360298 1706.F49.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGTCAGGCCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623903 qiita_ptid_1145:1706.F49.7.prev qiita_ptid_1145:1706.F49.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271748 SAMEA4360299 1706.F49.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTCCTCCATTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1623904 qiita_ptid_1145:1706.F49.8.prev qiita_ptid_1145:1706.F49.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271749 SAMEA4360300 1706.F49.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTTCACGCGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1623905 qiita_ptid_1145:1706.F49.9.prev qiita_ptid_1145:1706.F49.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271750 SAMEA4360301 1706.F49.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTATGCCGGCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F49.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A3 ERX1623906 qiita_ptid_1145:1706.F5.0.prev qiita_ptid_1145:1706.F5.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271751 SAMEA4360302 1706.F5.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTGTTCCTACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623907 qiita_ptid_1145:1706.F5.1.prev qiita_ptid_1145:1706.F5.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271752 SAMEA4360303 1706.F5.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCGTGCTCACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623908 qiita_ptid_1145:1706.F5.10.prev qiita_ptid_1145:1706.F5.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271753 SAMEA4360304 1706.F5.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCCCAGCATGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623909 qiita_ptid_1145:1706.F5.11.prev qiita_ptid_1145:1706.F5.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271754 SAMEA4360305 1706.F5.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGACTCTAGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623910 qiita_ptid_1145:1706.F5.12.prev qiita_ptid_1145:1706.F5.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271755 SAMEA4360306 1706.F5.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATGCTGTTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623911 qiita_ptid_1145:1706.F5.13.prev qiita_ptid_1145:1706.F5.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271756 SAMEA4360307 1706.F5.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCCAGGTCATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623912 qiita_ptid_1145:1706.F5.2.prev qiita_ptid_1145:1706.F5.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271757 SAMEA4360308 1706.F5.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACTACGTGGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623913 qiita_ptid_1145:1706.F5.3.prev qiita_ptid_1145:1706.F5.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271758 SAMEA4360309 1706.F5.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTAAGTTTGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623914 qiita_ptid_1145:1706.F5.4.prev qiita_ptid_1145:1706.F5.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271759 SAMEA4360310 1706.F5.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACATCTAGCAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623915 qiita_ptid_1145:1706.F5.5.prev qiita_ptid_1145:1706.F5.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271760 SAMEA4360311 1706.F5.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATCCCTCTACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623916 qiita_ptid_1145:1706.F5.6.prev qiita_ptid_1145:1706.F5.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271761 SAMEA4360312 1706.F5.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTTACGGTTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623917 qiita_ptid_1145:1706.F5.7.prev qiita_ptid_1145:1706.F5.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271762 SAMEA4360313 1706.F5.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGAACCAGACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E5 ERX1623918 qiita_ptid_1145:1706.F5.8.prev qiita_ptid_1145:1706.F5.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271763 SAMEA4360314 1706.F5.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACTCCTGTGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E1 ERX1623919 qiita_ptid_1145:1706.F5.9.prev qiita_ptid_1145:1706.F5.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271764 SAMEA4360315 1706.F5.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGCGCGAACTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F5.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1623920 qiita_ptid_1145:1706.F50.0.prev qiita_ptid_1145:1706.F50.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271765 SAMEA4360316 1706.F50.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCTTACACCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623921 qiita_ptid_1145:1706.F50.1.prev qiita_ptid_1145:1706.F50.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271766 SAMEA4360317 1706.F50.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTATCTTCACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623922 qiita_ptid_1145:1706.F50.10.prev qiita_ptid_1145:1706.F50.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271767 SAMEA4360318 1706.F50.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAGTTCGGTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623923 qiita_ptid_1145:1706.F50.11.prev qiita_ptid_1145:1706.F50.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271768 SAMEA4360319 1706.F50.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATGGACTTCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623924 qiita_ptid_1145:1706.F50.12.prev qiita_ptid_1145:1706.F50.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271769 SAMEA4360320 1706.F50.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTAAGACTTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623925 qiita_ptid_1145:1706.F50.13.prev qiita_ptid_1145:1706.F50.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271770 SAMEA4360321 1706.F50.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAACTGCGTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623926 qiita_ptid_1145:1706.F50.2.prev qiita_ptid_1145:1706.F50.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271771 SAMEA4360322 1706.F50.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGCTATTCCTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623927 qiita_ptid_1145:1706.F50.3.prev qiita_ptid_1145:1706.F50.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271772 SAMEA4360323 1706.F50.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTGGCGTTACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623928 qiita_ptid_1145:1706.F50.4.prev qiita_ptid_1145:1706.F50.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271773 SAMEA4360324 1706.F50.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAAACCTGGACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623929 qiita_ptid_1145:1706.F50.5.prev qiita_ptid_1145:1706.F50.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271774 SAMEA4360325 1706.F50.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCATGCTCCATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623930 qiita_ptid_1145:1706.F50.7.prev qiita_ptid_1145:1706.F50.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271775 SAMEA4360326 1706.F50.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTATCAAGACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1623931 qiita_ptid_1145:1706.F50.8.prev qiita_ptid_1145:1706.F50.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271776 SAMEA4360327 1706.F50.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGCTATTGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1623932 qiita_ptid_1145:1706.F50.9.prev qiita_ptid_1145:1706.F50.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271777 SAMEA4360328 1706.F50.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTGGAGGCTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F50.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B3 ERX1623933 qiita_ptid_1145:1706.F51.0.prev qiita_ptid_1145:1706.F51.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271778 SAMEA4360329 1706.F51.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGAGCTGTTACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623934 qiita_ptid_1145:1706.F51.1.prev qiita_ptid_1145:1706.F51.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271779 SAMEA4360330 1706.F51.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGCACAGTAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623935 qiita_ptid_1145:1706.F51.10.prev qiita_ptid_1145:1706.F51.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271780 SAMEA4360331 1706.F51.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTGGTTGGCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623936 qiita_ptid_1145:1706.F51.11.prev qiita_ptid_1145:1706.F51.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271781 SAMEA4360332 1706.F51.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACTAACAAACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623937 qiita_ptid_1145:1706.F51.12.prev qiita_ptid_1145:1706.F51.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271782 SAMEA4360333 1706.F51.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTTGGAGGTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623938 qiita_ptid_1145:1706.F51.13.prev qiita_ptid_1145:1706.F51.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271783 SAMEA4360334 1706.F51.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTATCGCCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623939 qiita_ptid_1145:1706.F51.2.prev qiita_ptid_1145:1706.F51.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271784 SAMEA4360335 1706.F51.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCGTGTAGCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623940 qiita_ptid_1145:1706.F51.3.prev qiita_ptid_1145:1706.F51.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271785 SAMEA4360336 1706.F51.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTAGAGAAACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623941 qiita_ptid_1145:1706.F51.4.prev qiita_ptid_1145:1706.F51.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271786 SAMEA4360337 1706.F51.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATACTCGGCTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623942 qiita_ptid_1145:1706.F51.5.prev qiita_ptid_1145:1706.F51.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271787 SAMEA4360338 1706.F51.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATACCGTGAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623943 qiita_ptid_1145:1706.F51.6.prev qiita_ptid_1145:1706.F51.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271788 SAMEA4360339 1706.F51.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTATTAAGCGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623944 qiita_ptid_1145:1706.F51.7.prev qiita_ptid_1145:1706.F51.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271789 SAMEA4360340 1706.F51.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCATTCGGCGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1623945 qiita_ptid_1145:1706.F51.8.prev qiita_ptid_1145:1706.F51.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271790 SAMEA4360341 1706.F51.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTAGTAAGCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1623946 qiita_ptid_1145:1706.F51.9.prev qiita_ptid_1145:1706.F51.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271791 SAMEA4360342 1706.F51.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGACACGGAGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F51.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C3 ERX1623947 qiita_ptid_1145:1706.F52.0.prev qiita_ptid_1145:1706.F52.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271792 SAMEA4360343 1706.F52.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACTTTCAGGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623948 qiita_ptid_1145:1706.F52.1.prev qiita_ptid_1145:1706.F52.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271793 SAMEA4360344 1706.F52.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTTAAGCAGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623949 qiita_ptid_1145:1706.F52.10.prev qiita_ptid_1145:1706.F52.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271794 SAMEA4360345 1706.F52.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAGCACTCATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623950 qiita_ptid_1145:1706.F52.11.prev qiita_ptid_1145:1706.F52.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271795 SAMEA4360346 1706.F52.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAATAGGAGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623951 qiita_ptid_1145:1706.F52.12.prev qiita_ptid_1145:1706.F52.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271796 SAMEA4360347 1706.F52.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATCTATCCTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623952 qiita_ptid_1145:1706.F52.13.prev qiita_ptid_1145:1706.F52.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271797 SAMEA4360348 1706.F52.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTGCATACCGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623953 qiita_ptid_1145:1706.F52.2.prev qiita_ptid_1145:1706.F52.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271798 SAMEA4360349 1706.F52.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATTATGGCGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623954 qiita_ptid_1145:1706.F52.3.prev qiita_ptid_1145:1706.F52.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271799 SAMEA4360350 1706.F52.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGAGGCGTAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623955 qiita_ptid_1145:1706.F52.4.prev qiita_ptid_1145:1706.F52.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271800 SAMEA4360351 1706.F52.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCCCGTGAAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623956 qiita_ptid_1145:1706.F52.5.prev qiita_ptid_1145:1706.F52.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271801 SAMEA4360352 1706.F52.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCAGCAAGATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623957 qiita_ptid_1145:1706.F52.6.prev qiita_ptid_1145:1706.F52.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271802 SAMEA4360353 1706.F52.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGACCAAGGGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623958 qiita_ptid_1145:1706.F52.7.prev qiita_ptid_1145:1706.F52.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271803 SAMEA4360354 1706.F52.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGTCGTTAAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1623959 qiita_ptid_1145:1706.F52.8.prev qiita_ptid_1145:1706.F52.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271804 SAMEA4360355 1706.F52.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCGGAGTAGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1623960 qiita_ptid_1145:1706.F52.9.prev qiita_ptid_1145:1706.F52.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271805 SAMEA4360356 1706.F52.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGAGCAGAGCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F52.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D3 ERX1623961 qiita_ptid_1145:1706.F53.0.prev qiita_ptid_1145:1706.F53.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271806 SAMEA4360357 1706.F53.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACACAAGTCGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623962 qiita_ptid_1145:1706.F53.1.prev qiita_ptid_1145:1706.F53.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271807 SAMEA4360358 1706.F53.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGGGCGCTGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623963 qiita_ptid_1145:1706.F53.10.prev qiita_ptid_1145:1706.F53.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271808 SAMEA4360359 1706.F53.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAACTCCTAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623964 qiita_ptid_1145:1706.F53.11.prev qiita_ptid_1145:1706.F53.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271809 SAMEA4360360 1706.F53.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTTCAATGGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623965 qiita_ptid_1145:1706.F53.12.prev qiita_ptid_1145:1706.F53.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271810 SAMEA4360361 1706.F53.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCAACAACCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623966 qiita_ptid_1145:1706.F53.13.prev qiita_ptid_1145:1706.F53.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271811 SAMEA4360362 1706.F53.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGATTGCTGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623967 qiita_ptid_1145:1706.F53.2.prev qiita_ptid_1145:1706.F53.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271812 SAMEA4360363 1706.F53.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGATTGACCAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623968 qiita_ptid_1145:1706.F53.3.prev qiita_ptid_1145:1706.F53.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271813 SAMEA4360364 1706.F53.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCTTGGAGTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623969 qiita_ptid_1145:1706.F53.4.prev qiita_ptid_1145:1706.F53.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271814 SAMEA4360365 1706.F53.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGTAGTTGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623970 qiita_ptid_1145:1706.F53.5.prev qiita_ptid_1145:1706.F53.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271815 SAMEA4360366 1706.F53.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGAGTCTTGCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623971 qiita_ptid_1145:1706.F53.6.prev qiita_ptid_1145:1706.F53.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271816 SAMEA4360367 1706.F53.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGGCTGATTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623972 qiita_ptid_1145:1706.F53.7.prev qiita_ptid_1145:1706.F53.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271817 SAMEA4360368 1706.F53.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACTGCGATATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1623973 qiita_ptid_1145:1706.F53.8.prev qiita_ptid_1145:1706.F53.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271818 SAMEA4360369 1706.F53.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACAAACTGCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1623974 qiita_ptid_1145:1706.F53.9.prev qiita_ptid_1145:1706.F53.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271819 SAMEA4360370 1706.F53.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCAGAGCCCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F53.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E3 ERX1623975 qiita_ptid_1145:1706.F54.0.prev qiita_ptid_1145:1706.F54.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271820 SAMEA4360371 1706.F54.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCGTGAATGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623976 qiita_ptid_1145:1706.F54.1.prev qiita_ptid_1145:1706.F54.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271821 SAMEA4360372 1706.F54.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCTGCCTAATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623977 qiita_ptid_1145:1706.F54.10.prev qiita_ptid_1145:1706.F54.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271822 SAMEA4360373 1706.F54.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCTAGGTCCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623978 qiita_ptid_1145:1706.F54.11.prev qiita_ptid_1145:1706.F54.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271823 SAMEA4360374 1706.F54.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTAGCCTGGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623979 qiita_ptid_1145:1706.F54.12.prev qiita_ptid_1145:1706.F54.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271824 SAMEA4360375 1706.F54.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCATAGCATCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623980 qiita_ptid_1145:1706.F54.13.prev qiita_ptid_1145:1706.F54.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271825 SAMEA4360376 1706.F54.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGTTTCTTCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623981 qiita_ptid_1145:1706.F54.2.prev qiita_ptid_1145:1706.F54.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271826 SAMEA4360377 1706.F54.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGGTACACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623982 qiita_ptid_1145:1706.F54.3.prev qiita_ptid_1145:1706.F54.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271827 SAMEA4360378 1706.F54.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACCATGCCAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623983 qiita_ptid_1145:1706.F54.4.prev qiita_ptid_1145:1706.F54.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271828 SAMEA4360379 1706.F54.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCCATTCCCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623984 qiita_ptid_1145:1706.F54.5.prev qiita_ptid_1145:1706.F54.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271829 SAMEA4360380 1706.F54.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCACGAGAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623985 qiita_ptid_1145:1706.F54.6.prev qiita_ptid_1145:1706.F54.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271830 SAMEA4360381 1706.F54.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGTGACGCTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623986 qiita_ptid_1145:1706.F54.7.prev qiita_ptid_1145:1706.F54.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271831 SAMEA4360382 1706.F54.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGTGTCCATGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1623987 qiita_ptid_1145:1706.F54.8.prev qiita_ptid_1145:1706.F54.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271832 SAMEA4360383 1706.F54.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGGACTATTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1623988 qiita_ptid_1145:1706.F54.9.prev qiita_ptid_1145:1706.F54.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271833 SAMEA4360384 1706.F54.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGTTACTCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F54.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F3 ERX1623989 qiita_ptid_1145:1706.F55.0.prev qiita_ptid_1145:1706.F55.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271834 SAMEA4360385 1706.F55.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATGCCAGAGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623990 qiita_ptid_1145:1706.F55.1.prev qiita_ptid_1145:1706.F55.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271835 SAMEA4360386 1706.F55.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCATTACTGGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623991 qiita_ptid_1145:1706.F55.10.prev qiita_ptid_1145:1706.F55.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271836 SAMEA4360387 1706.F55.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTCGGGTACTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623992 qiita_ptid_1145:1706.F55.11.prev qiita_ptid_1145:1706.F55.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271837 SAMEA4360388 1706.F55.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCGGTACTCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1623993 qiita_ptid_1145:1706.F55.12.prev qiita_ptid_1145:1706.F55.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271838 SAMEA4360389 1706.F55.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTACTCTCGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1623994 qiita_ptid_1145:1706.F55.13.prev qiita_ptid_1145:1706.F55.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271839 SAMEA4360390 1706.F55.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTATTCCTCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623995 qiita_ptid_1145:1706.F55.2.prev qiita_ptid_1145:1706.F55.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271840 SAMEA4360391 1706.F55.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCGACAGAGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623996 qiita_ptid_1145:1706.F55.3.prev qiita_ptid_1145:1706.F55.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271841 SAMEA4360392 1706.F55.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGAGGCTACAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1623997 qiita_ptid_1145:1706.F55.4.prev qiita_ptid_1145:1706.F55.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271842 SAMEA4360393 1706.F55.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATTCAGCGGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623998 qiita_ptid_1145:1706.F55.5.prev qiita_ptid_1145:1706.F55.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271843 SAMEA4360394 1706.F55.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCAGATTAGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1623999 qiita_ptid_1145:1706.F55.6.prev qiita_ptid_1145:1706.F55.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271844 SAMEA4360395 1706.F55.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGAAGGTGTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1624000 qiita_ptid_1145:1706.F55.7.prev qiita_ptid_1145:1706.F55.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271845 SAMEA4360396 1706.F55.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTGTGATTCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1624001 qiita_ptid_1145:1706.F55.8.prev qiita_ptid_1145:1706.F55.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271846 SAMEA4360397 1706.F55.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAGTGGTCTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1624002 qiita_ptid_1145:1706.F55.9.prev qiita_ptid_1145:1706.F55.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271847 SAMEA4360398 1706.F55.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCGTCATGGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F55.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G3 ERX1624003 qiita_ptid_1145:1706.F56.0.prev qiita_ptid_1145:1706.F56.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271848 SAMEA4360399 1706.F56.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGAGTCCACTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1624004 qiita_ptid_1145:1706.F56.1.prev qiita_ptid_1145:1706.F56.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271849 SAMEA4360400 1706.F56.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGTACAGTCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1624005 qiita_ptid_1145:1706.F56.10.prev qiita_ptid_1145:1706.F56.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271850 SAMEA4360401 1706.F56.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACCTCGGATAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1624006 qiita_ptid_1145:1706.F56.11.prev qiita_ptid_1145:1706.F56.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271851 SAMEA4360402 1706.F56.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTGCTGGTCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1624007 qiita_ptid_1145:1706.F56.12.prev qiita_ptid_1145:1706.F56.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271852 SAMEA4360403 1706.F56.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTGACAATAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1624008 qiita_ptid_1145:1706.F56.13.prev qiita_ptid_1145:1706.F56.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271853 SAMEA4360404 1706.F56.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGACACACGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1624009 qiita_ptid_1145:1706.F56.2.prev qiita_ptid_1145:1706.F56.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271854 SAMEA4360405 1706.F56.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCACCTAGGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1624010 qiita_ptid_1145:1706.F56.3.prev qiita_ptid_1145:1706.F56.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271855 SAMEA4360406 1706.F56.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTGGCAAACCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1624011 qiita_ptid_1145:1706.F56.4.prev qiita_ptid_1145:1706.F56.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271856 SAMEA4360407 1706.F56.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGCACTCAAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1624012 qiita_ptid_1145:1706.F56.5.prev qiita_ptid_1145:1706.F56.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271857 SAMEA4360408 1706.F56.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCTGTGGATTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1624013 qiita_ptid_1145:1706.F56.6.prev qiita_ptid_1145:1706.F56.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271858 SAMEA4360409 1706.F56.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCCTGGTACCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1624014 qiita_ptid_1145:1706.F56.7.prev qiita_ptid_1145:1706.F56.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271859 SAMEA4360410 1706.F56.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGTAAAGTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1624015 qiita_ptid_1145:1706.F56.9.prev qiita_ptid_1145:1706.F56.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271860 SAMEA4360411 1706.F56.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCAATTAGTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F56.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H3 ERX1624016 qiita_ptid_1145:1706.F57.0.prev qiita_ptid_1145:1706.F57.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271861 SAMEA4360412 1706.F57.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCTCTGGGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1624017 qiita_ptid_1145:1706.F57.1.prev qiita_ptid_1145:1706.F57.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271862 SAMEA4360413 1706.F57.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCCTCATGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1624018 qiita_ptid_1145:1706.F57.10.prev qiita_ptid_1145:1706.F57.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271863 SAMEA4360414 1706.F57.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACGTTTATTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1624019 qiita_ptid_1145:1706.F57.11.prev qiita_ptid_1145:1706.F57.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271864 SAMEA4360415 1706.F57.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGTCTCCTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1624020 qiita_ptid_1145:1706.F57.12.prev qiita_ptid_1145:1706.F57.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271865 SAMEA4360416 1706.F57.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGGTGTTTGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1624021 qiita_ptid_1145:1706.F57.13.prev qiita_ptid_1145:1706.F57.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271866 SAMEA4360417 1706.F57.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTTAGCGCTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1624022 qiita_ptid_1145:1706.F57.2.prev qiita_ptid_1145:1706.F57.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271867 SAMEA4360418 1706.F57.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTACGATATGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1624023 qiita_ptid_1145:1706.F57.3.prev qiita_ptid_1145:1706.F57.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271868 SAMEA4360419 1706.F57.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCGAGTATATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1624024 qiita_ptid_1145:1706.F57.4.prev qiita_ptid_1145:1706.F57.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271869 SAMEA4360420 1706.F57.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAACGGCGCTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1624025 qiita_ptid_1145:1706.F57.5.prev qiita_ptid_1145:1706.F57.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271870 SAMEA4360421 1706.F57.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCTAGCCCAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1624026 qiita_ptid_1145:1706.F57.6.prev qiita_ptid_1145:1706.F57.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271871 SAMEA4360422 1706.F57.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTGAGCTGCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1624027 qiita_ptid_1145:1706.F57.7.prev qiita_ptid_1145:1706.F57.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271872 SAMEA4360423 1706.F57.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCTGTCCTTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1624028 qiita_ptid_1145:1706.F57.8.prev qiita_ptid_1145:1706.F57.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271873 SAMEA4360424 1706.F57.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCTTAGTGCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1624029 qiita_ptid_1145:1706.F57.9.prev qiita_ptid_1145:1706.F57.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271874 SAMEA4360425 1706.F57.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGGTATGGGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F57.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A4 ERX1624030 qiita_ptid_1145:1706.F58.0.prev qiita_ptid_1145:1706.F58.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271875 SAMEA4360426 1706.F58.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAGGTGCTTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1624031 qiita_ptid_1145:1706.F58.1.prev qiita_ptid_1145:1706.F58.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271876 SAMEA4360427 1706.F58.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACTGACTCGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1624032 qiita_ptid_1145:1706.F58.10.prev qiita_ptid_1145:1706.F58.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271877 SAMEA4360428 1706.F58.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTACGTGGCGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1624033 qiita_ptid_1145:1706.F58.11.prev qiita_ptid_1145:1706.F58.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271878 SAMEA4360429 1706.F58.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACTGAGCCTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1624034 qiita_ptid_1145:1706.F58.12.prev qiita_ptid_1145:1706.F58.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271879 SAMEA4360430 1706.F58.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGATCTAGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1624035 qiita_ptid_1145:1706.F58.13.prev qiita_ptid_1145:1706.F58.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271880 SAMEA4360431 1706.F58.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTAGACTCGGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1624036 qiita_ptid_1145:1706.F58.2.prev qiita_ptid_1145:1706.F58.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271881 SAMEA4360432 1706.F58.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGTCACCGCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1624037 qiita_ptid_1145:1706.F58.3.prev qiita_ptid_1145:1706.F58.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271882 SAMEA4360433 1706.F58.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAGTAGCGAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1624038 qiita_ptid_1145:1706.F58.4.prev qiita_ptid_1145:1706.F58.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271883 SAMEA4360434 1706.F58.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGAATTGACAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1624039 qiita_ptid_1145:1706.F58.5.prev qiita_ptid_1145:1706.F58.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271884 SAMEA4360435 1706.F58.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCTGTCAAGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1624040 qiita_ptid_1145:1706.F58.6.prev qiita_ptid_1145:1706.F58.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271885 SAMEA4360436 1706.F58.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTACTGTGGCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1624041 qiita_ptid_1145:1706.F58.7.prev qiita_ptid_1145:1706.F58.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271886 SAMEA4360437 1706.F58.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGTGACAACTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1624042 qiita_ptid_1145:1706.F58.8.prev qiita_ptid_1145:1706.F58.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271887 SAMEA4360438 1706.F58.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACTTCACTTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1624043 qiita_ptid_1145:1706.F58.9.prev qiita_ptid_1145:1706.F58.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271888 SAMEA4360439 1706.F58.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGTGGTTCCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F58.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B4 ERX1624044 qiita_ptid_1145:1706.F59.0.prev qiita_ptid_1145:1706.F59.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271889 SAMEA4360440 1706.F59.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAACACATGCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1624045 qiita_ptid_1145:1706.F59.1.prev qiita_ptid_1145:1706.F59.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271890 SAMEA4360441 1706.F59.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTACTTACATCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1624046 qiita_ptid_1145:1706.F59.10.prev qiita_ptid_1145:1706.F59.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271891 SAMEA4360442 1706.F59.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCCACACGTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1624047 qiita_ptid_1145:1706.F59.11.prev qiita_ptid_1145:1706.F59.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271892 SAMEA4360443 1706.F59.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCCAGGCAGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1624048 qiita_ptid_1145:1706.F59.12.prev qiita_ptid_1145:1706.F59.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271893 SAMEA4360444 1706.F59.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCACCTCCTTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1624049 qiita_ptid_1145:1706.F59.13.prev qiita_ptid_1145:1706.F59.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271894 SAMEA4360445 1706.F59.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAAACTCGTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1624050 qiita_ptid_1145:1706.F59.2.prev qiita_ptid_1145:1706.F59.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271895 SAMEA4360446 1706.F59.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCGGAGGTTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1624051 qiita_ptid_1145:1706.F59.3.prev qiita_ptid_1145:1706.F59.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271896 SAMEA4360447 1706.F59.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGGTTCTTGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1624052 qiita_ptid_1145:1706.F59.4.prev qiita_ptid_1145:1706.F59.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271897 SAMEA4360448 1706.F59.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGCTTAACGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1624053 qiita_ptid_1145:1706.F59.5.prev qiita_ptid_1145:1706.F59.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271898 SAMEA4360449 1706.F59.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGTGTGTAGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C4 ERX1624054 qiita_ptid_1145:1706.F59.6.prev qiita_ptid_1145:1706.F59.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271899 SAMEA4360450 1706.F59.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTACCATTGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1624055 qiita_ptid_1145:1706.F59.7.prev qiita_ptid_1145:1706.F59.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271900 SAMEA4360451 1706.F59.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCCATTGTGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1624056 qiita_ptid_1145:1706.F59.8.prev qiita_ptid_1145:1706.F59.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271901 SAMEA4360452 1706.F59.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTACCGACGAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F59.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1624057 qiita_ptid_1145:1706.F6.0.prev qiita_ptid_1145:1706.F6.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271902 SAMEA4360453 1706.F6.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTATCATCCTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1624058 qiita_ptid_1145:1706.F6.1.prev qiita_ptid_1145:1706.F6.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271903 SAMEA4360454 1706.F6.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGTGTAGGCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1624059 qiita_ptid_1145:1706.F6.10.prev qiita_ptid_1145:1706.F6.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271904 SAMEA4360455 1706.F6.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCAACAGATTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1624060 qiita_ptid_1145:1706.F6.11.prev qiita_ptid_1145:1706.F6.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271905 SAMEA4360456 1706.F6.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGCCTATAAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1624061 qiita_ptid_1145:1706.F6.12.prev qiita_ptid_1145:1706.F6.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271906 SAMEA4360457 1706.F6.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTGTTTCGGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1624062 qiita_ptid_1145:1706.F6.13.prev qiita_ptid_1145:1706.F6.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271907 SAMEA4360458 1706.F6.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAACTAGACTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1624063 qiita_ptid_1145:1706.F6.2.prev qiita_ptid_1145:1706.F6.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271908 SAMEA4360459 1706.F6.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGTCAATTGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1624064 qiita_ptid_1145:1706.F6.3.prev qiita_ptid_1145:1706.F6.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271909 SAMEA4360460 1706.F6.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTGTGCCATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1624065 qiita_ptid_1145:1706.F6.4.prev qiita_ptid_1145:1706.F6.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271910 SAMEA4360461 1706.F6.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAATGTAGACAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1624066 qiita_ptid_1145:1706.F6.5.prev qiita_ptid_1145:1706.F6.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271911 SAMEA4360462 1706.F6.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCACAGATCGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1624067 qiita_ptid_1145:1706.F6.6.prev qiita_ptid_1145:1706.F6.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271912 SAMEA4360463 1706.F6.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATCCTCGGAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1624068 qiita_ptid_1145:1706.F6.7.prev qiita_ptid_1145:1706.F6.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271913 SAMEA4360464 1706.F6.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCTATTCCACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1624069 qiita_ptid_1145:1706.F6.8.prev qiita_ptid_1145:1706.F6.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271914 SAMEA4360465 1706.F6.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCACCCAGTAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F1 ERX1624070 qiita_ptid_1145:1706.F6.9.prev qiita_ptid_1145:1706.F6.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271915 SAMEA4360466 1706.F6.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCGAGCCGATCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F6.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1624071 qiita_ptid_1145:1706.F60.0.prev qiita_ptid_1145:1706.F60.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271916 SAMEA4360467 1706.F60.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGCACGTGATAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1624072 qiita_ptid_1145:1706.F60.1.prev qiita_ptid_1145:1706.F60.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271917 SAMEA4360468 1706.F60.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGGCGTTATGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1624073 qiita_ptid_1145:1706.F60.10.prev qiita_ptid_1145:1706.F60.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271918 SAMEA4360469 1706.F60.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACCTGTAGTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1624074 qiita_ptid_1145:1706.F60.11.prev qiita_ptid_1145:1706.F60.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271919 SAMEA4360470 1706.F60.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCGAACGTCACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1624075 qiita_ptid_1145:1706.F60.12.prev qiita_ptid_1145:1706.F60.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271920 SAMEA4360471 1706.F60.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCCAAGAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1624076 qiita_ptid_1145:1706.F60.13.prev qiita_ptid_1145:1706.F60.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271921 SAMEA4360472 1706.F60.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGCACGATAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1624077 qiita_ptid_1145:1706.F60.2.prev qiita_ptid_1145:1706.F60.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271922 SAMEA4360473 1706.F60.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAATACGCCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1624078 qiita_ptid_1145:1706.F60.3.prev qiita_ptid_1145:1706.F60.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271923 SAMEA4360474 1706.F60.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAGCGCCGTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1624079 qiita_ptid_1145:1706.F60.4.prev qiita_ptid_1145:1706.F60.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271924 SAMEA4360475 1706.F60.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGACAGTGTATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1624080 qiita_ptid_1145:1706.F60.5.prev qiita_ptid_1145:1706.F60.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271925 SAMEA4360476 1706.F60.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCAACATTGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1624081 qiita_ptid_1145:1706.F60.6.prev qiita_ptid_1145:1706.F60.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271926 SAMEA4360477 1706.F60.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTATTGGTCAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1624082 qiita_ptid_1145:1706.F60.7.prev qiita_ptid_1145:1706.F60.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271927 SAMEA4360478 1706.F60.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTACGAAAGCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B12 ERX1624083 qiita_ptid_1145:1706.F60.8.prev qiita_ptid_1145:1706.F60.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271928 SAMEA4360479 1706.F60.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAGGACTACCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1624084 qiita_ptid_1145:1706.F60.9.prev qiita_ptid_1145:1706.F60.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271929 SAMEA4360480 1706.F60.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGAGAGATCACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F60.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D4 ERX1624085 qiita_ptid_1145:1706.F61.0.prev qiita_ptid_1145:1706.F61.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271930 SAMEA4360481 1706.F61.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGTCCATGAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1624086 qiita_ptid_1145:1706.F61.1.prev qiita_ptid_1145:1706.F61.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271931 SAMEA4360482 1706.F61.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTTCCGTGGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1624087 qiita_ptid_1145:1706.F61.10.prev qiita_ptid_1145:1706.F61.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271932 SAMEA4360483 1706.F61.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCGGGCTTAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1624088 qiita_ptid_1145:1706.F61.11.prev qiita_ptid_1145:1706.F61.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271933 SAMEA4360484 1706.F61.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGACGACATCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1624089 qiita_ptid_1145:1706.F61.12.prev qiita_ptid_1145:1706.F61.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271934 SAMEA4360485 1706.F61.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCAGTACTAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1624090 qiita_ptid_1145:1706.F61.13.prev qiita_ptid_1145:1706.F61.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271935 SAMEA4360486 1706.F61.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTACTGTACCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1624091 qiita_ptid_1145:1706.F61.2.prev qiita_ptid_1145:1706.F61.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271936 SAMEA4360487 1706.F61.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTTACGAGCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1624092 qiita_ptid_1145:1706.F61.3.prev qiita_ptid_1145:1706.F61.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271937 SAMEA4360488 1706.F61.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCACCGGTCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1624093 qiita_ptid_1145:1706.F61.4.prev qiita_ptid_1145:1706.F61.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271938 SAMEA4360489 1706.F61.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAAAGCGGCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1624094 qiita_ptid_1145:1706.F61.5.prev qiita_ptid_1145:1706.F61.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271939 SAMEA4360490 1706.F61.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACAACACTCCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1624095 qiita_ptid_1145:1706.F61.6.prev qiita_ptid_1145:1706.F61.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271940 SAMEA4360491 1706.F61.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGTTAGCATCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1624096 qiita_ptid_1145:1706.F61.7.prev qiita_ptid_1145:1706.F61.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271941 SAMEA4360492 1706.F61.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTCCAACTCAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1624097 qiita_ptid_1145:1706.F61.8.prev qiita_ptid_1145:1706.F61.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271942 SAMEA4360493 1706.F61.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAGACATGTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1624098 qiita_ptid_1145:1706.F61.9.prev qiita_ptid_1145:1706.F61.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271943 SAMEA4360494 1706.F61.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTGTAGAGCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F61.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E4 ERX1624099 qiita_ptid_1145:1706.F62.0.prev qiita_ptid_1145:1706.F62.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271944 SAMEA4360495 1706.F62.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGTGAGTTCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1624100 qiita_ptid_1145:1706.F62.1.prev qiita_ptid_1145:1706.F62.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271945 SAMEA4360496 1706.F62.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATATGACCCAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1624101 qiita_ptid_1145:1706.F62.10.prev qiita_ptid_1145:1706.F62.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271946 SAMEA4360497 1706.F62.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCTCACTATCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1624102 qiita_ptid_1145:1706.F62.11.prev qiita_ptid_1145:1706.F62.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271947 SAMEA4360498 1706.F62.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATGCAATGCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1624103 qiita_ptid_1145:1706.F62.12.prev qiita_ptid_1145:1706.F62.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271948 SAMEA4360499 1706.F62.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTTAGATGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1624104 qiita_ptid_1145:1706.F62.13.prev qiita_ptid_1145:1706.F62.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271949 SAMEA4360500 1706.F62.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTACCTAAGTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1624105 qiita_ptid_1145:1706.F62.2.prev qiita_ptid_1145:1706.F62.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271950 SAMEA4360501 1706.F62.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGGCGCTCCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1624106 qiita_ptid_1145:1706.F62.3.prev qiita_ptid_1145:1706.F62.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271951 SAMEA4360502 1706.F62.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATGGAGCTAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1624107 qiita_ptid_1145:1706.F62.4.prev qiita_ptid_1145:1706.F62.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271952 SAMEA4360503 1706.F62.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGCGTCATTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1624108 qiita_ptid_1145:1706.F62.5.prev qiita_ptid_1145:1706.F62.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271953 SAMEA4360504 1706.F62.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAAATTCAGGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1624109 qiita_ptid_1145:1706.F62.6.prev qiita_ptid_1145:1706.F62.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271954 SAMEA4360505 1706.F62.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGGCTAGTTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1624110 qiita_ptid_1145:1706.F62.7.prev qiita_ptid_1145:1706.F62.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271955 SAMEA4360506 1706.F62.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTCGCGGATGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1624111 qiita_ptid_1145:1706.F62.8.prev qiita_ptid_1145:1706.F62.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271956 SAMEA4360507 1706.F62.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTGCACAATTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1624112 qiita_ptid_1145:1706.F62.9.prev qiita_ptid_1145:1706.F62.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271957 SAMEA4360508 1706.F62.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTACCTGCAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F62.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F4 ERX1624113 qiita_ptid_1145:1706.F63.0.prev qiita_ptid_1145:1706.F63.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271958 SAMEA4360509 1706.F63.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGTCCAAATCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1624114 qiita_ptid_1145:1706.F63.1.prev qiita_ptid_1145:1706.F63.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271959 SAMEA4360510 1706.F63.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGGGCCACATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1624115 qiita_ptid_1145:1706.F63.10.prev qiita_ptid_1145:1706.F63.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271960 SAMEA4360511 1706.F63.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCACCTGTATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1624116 qiita_ptid_1145:1706.F63.11.prev qiita_ptid_1145:1706.F63.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271961 SAMEA4360512 1706.F63.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACAGGATTACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1624117 qiita_ptid_1145:1706.F63.12.prev qiita_ptid_1145:1706.F63.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271962 SAMEA4360513 1706.F63.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAGTTCTCGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1624118 qiita_ptid_1145:1706.F63.13.prev qiita_ptid_1145:1706.F63.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271963 SAMEA4360514 1706.F63.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCTCTGAAAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1624119 qiita_ptid_1145:1706.F63.2.prev qiita_ptid_1145:1706.F63.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271964 SAMEA4360515 1706.F63.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTCGCAAATAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1624120 qiita_ptid_1145:1706.F63.3.prev qiita_ptid_1145:1706.F63.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271965 SAMEA4360516 1706.F63.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAGGAACCGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1624121 qiita_ptid_1145:1706.F63.4.prev qiita_ptid_1145:1706.F63.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271966 SAMEA4360517 1706.F63.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTCCGGATTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1624122 qiita_ptid_1145:1706.F63.5.prev qiita_ptid_1145:1706.F63.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271967 SAMEA4360518 1706.F63.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGGTCCCACAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1624123 qiita_ptid_1145:1706.F63.6.prev qiita_ptid_1145:1706.F63.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271968 SAMEA4360519 1706.F63.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAGCTTGAATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1624124 qiita_ptid_1145:1706.F63.7.prev qiita_ptid_1145:1706.F63.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271969 SAMEA4360520 1706.F63.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTAGCTATGGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1624125 qiita_ptid_1145:1706.F63.8.prev qiita_ptid_1145:1706.F63.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271970 SAMEA4360521 1706.F63.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATAGCACTCGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1624126 qiita_ptid_1145:1706.F63.9.prev qiita_ptid_1145:1706.F63.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271971 SAMEA4360522 1706.F63.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGATCTATGCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F63.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G4 ERX1624127 qiita_ptid_1145:1706.F64.0.prev qiita_ptid_1145:1706.F64.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271972 SAMEA4360523 1706.F64.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAACGGGACGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1624128 qiita_ptid_1145:1706.F64.10.prev qiita_ptid_1145:1706.F64.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271973 SAMEA4360524 1706.F64.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGCTTGTGTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1624129 qiita_ptid_1145:1706.F64.11.prev qiita_ptid_1145:1706.F64.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271974 SAMEA4360525 1706.F64.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGAAGCCGGAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1624130 qiita_ptid_1145:1706.F64.12.prev qiita_ptid_1145:1706.F64.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271975 SAMEA4360526 1706.F64.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCTACAACTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1624131 qiita_ptid_1145:1706.F64.13.prev qiita_ptid_1145:1706.F64.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271976 SAMEA4360527 1706.F64.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAAGGTCGCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1624132 qiita_ptid_1145:1706.F64.2.prev qiita_ptid_1145:1706.F64.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271977 SAMEA4360528 1706.F64.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGTTGTCGTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1624133 qiita_ptid_1145:1706.F64.3.prev qiita_ptid_1145:1706.F64.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271978 SAMEA4360529 1706.F64.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATCAGAGCTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1624134 qiita_ptid_1145:1706.F64.4.prev qiita_ptid_1145:1706.F64.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271979 SAMEA4360530 1706.F64.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGGAAACTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1624135 qiita_ptid_1145:1706.F64.5.prev qiita_ptid_1145:1706.F64.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271980 SAMEA4360531 1706.F64.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGTCAGTGACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1624136 qiita_ptid_1145:1706.F64.6.prev qiita_ptid_1145:1706.F64.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271981 SAMEA4360532 1706.F64.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTAAAGTCGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1624137 qiita_ptid_1145:1706.F64.7.prev qiita_ptid_1145:1706.F64.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271982 SAMEA4360533 1706.F64.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGTGGCTATCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1624138 qiita_ptid_1145:1706.F64.8.prev qiita_ptid_1145:1706.F64.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271983 SAMEA4360534 1706.F64.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAAGTTTGCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1624139 qiita_ptid_1145:1706.F64.9.prev qiita_ptid_1145:1706.F64.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271984 SAMEA4360535 1706.F64.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTACGCAGTCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F64.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H4 ERX1624140 qiita_ptid_1145:1706.F65.0.prev qiita_ptid_1145:1706.F65.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271985 SAMEA4360536 1706.F65.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATCATACGGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1624141 qiita_ptid_1145:1706.F65.1.prev qiita_ptid_1145:1706.F65.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271986 SAMEA4360537 1706.F65.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACCAAACTCGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624142 qiita_ptid_1145:1706.F65.10.prev qiita_ptid_1145:1706.F65.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271987 SAMEA4360538 1706.F65.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAACGGAAACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1624143 qiita_ptid_1145:1706.F65.11.prev qiita_ptid_1145:1706.F65.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271988 SAMEA4360539 1706.F65.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGCATACTGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624144 qiita_ptid_1145:1706.F65.12.prev qiita_ptid_1145:1706.F65.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271989 SAMEA4360540 1706.F65.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGACCGCGGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624145 qiita_ptid_1145:1706.F65.13.prev qiita_ptid_1145:1706.F65.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271990 SAMEA4360541 1706.F65.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACTTATGCCCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624146 qiita_ptid_1145:1706.F65.2.prev qiita_ptid_1145:1706.F65.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271991 SAMEA4360542 1706.F65.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGGTGGTTTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1624147 qiita_ptid_1145:1706.F65.3.prev qiita_ptid_1145:1706.F65.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271992 SAMEA4360543 1706.F65.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACCACAACGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1624148 qiita_ptid_1145:1706.F65.4.prev qiita_ptid_1145:1706.F65.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271993 SAMEA4360544 1706.F65.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTATCCAAGTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624149 qiita_ptid_1145:1706.F65.5.prev qiita_ptid_1145:1706.F65.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271994 SAMEA4360545 1706.F65.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTCTCTTCTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624150 qiita_ptid_1145:1706.F65.6.prev qiita_ptid_1145:1706.F65.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271995 SAMEA4360546 1706.F65.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGAAGTCTACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624151 qiita_ptid_1145:1706.F65.7.prev qiita_ptid_1145:1706.F65.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271996 SAMEA4360547 1706.F65.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTCACGCCCAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624152 qiita_ptid_1145:1706.F65.8.prev qiita_ptid_1145:1706.F65.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271997 SAMEA4360548 1706.F65.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACTCTCTTAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1624153 qiita_ptid_1145:1706.F65.9.prev qiita_ptid_1145:1706.F65.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271998 SAMEA4360549 1706.F65.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAGGTTGCCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F65.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624154 qiita_ptid_1145:1706.F66.0.prev qiita_ptid_1145:1706.F66.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1271999 SAMEA4360550 1706.F66.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGCATTTGGATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1624155 qiita_ptid_1145:1706.F66.10.prev qiita_ptid_1145:1706.F66.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272000 SAMEA4360551 1706.F66.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAATGCCTCACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1624156 qiita_ptid_1145:1706.F66.11.prev qiita_ptid_1145:1706.F66.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272001 SAMEA4360552 1706.F66.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGAAGGCCTTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624157 qiita_ptid_1145:1706.F66.12.prev qiita_ptid_1145:1706.F66.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272002 SAMEA4360553 1706.F66.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGATCTTCGAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624158 qiita_ptid_1145:1706.F66.13.prev qiita_ptid_1145:1706.F66.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272003 SAMEA4360554 1706.F66.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTGGGCTCATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624159 qiita_ptid_1145:1706.F66.2.prev qiita_ptid_1145:1706.F66.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272004 SAMEA4360555 1706.F66.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTAACGCCGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1624160 qiita_ptid_1145:1706.F66.3.prev qiita_ptid_1145:1706.F66.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272005 SAMEA4360556 1706.F66.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCGGACCCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1624161 qiita_ptid_1145:1706.F66.4.prev qiita_ptid_1145:1706.F66.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272006 SAMEA4360557 1706.F66.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAATCGCTTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624162 qiita_ptid_1145:1706.F66.5.prev qiita_ptid_1145:1706.F66.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272007 SAMEA4360558 1706.F66.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCCCACGTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624163 qiita_ptid_1145:1706.F66.6.prev qiita_ptid_1145:1706.F66.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272008 SAMEA4360559 1706.F66.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATATAAGGCCCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624164 qiita_ptid_1145:1706.F66.7.prev qiita_ptid_1145:1706.F66.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272009 SAMEA4360560 1706.F66.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTTCCTTGTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624165 qiita_ptid_1145:1706.F66.8.prev qiita_ptid_1145:1706.F66.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272010 SAMEA4360561 1706.F66.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAGTGGATATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1624166 qiita_ptid_1145:1706.F66.9.prev qiita_ptid_1145:1706.F66.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272011 SAMEA4360562 1706.F66.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCACTCCGAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F66.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624167 qiita_ptid_1145:1706.F7.0.prev qiita_ptid_1145:1706.F7.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272012 SAMEA4360563 1706.F7.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTCCTAGGCCAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1624168 qiita_ptid_1145:1706.F7.1.prev qiita_ptid_1145:1706.F7.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272013 SAMEA4360564 1706.F7.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATAACATGTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1624169 qiita_ptid_1145:1706.F7.10.prev qiita_ptid_1145:1706.F7.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272014 SAMEA4360565 1706.F7.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGGTGCTGAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1624170 qiita_ptid_1145:1706.F7.11.prev qiita_ptid_1145:1706.F7.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272015 SAMEA4360566 1706.F7.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCACAAGGCAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1624171 qiita_ptid_1145:1706.F7.12.prev qiita_ptid_1145:1706.F7.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272016 SAMEA4360567 1706.F7.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACTGGTGCATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1624172 qiita_ptid_1145:1706.F7.13.prev qiita_ptid_1145:1706.F7.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272017 SAMEA4360568 1706.F7.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTACGGATAAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1624173 qiita_ptid_1145:1706.F7.2.prev qiita_ptid_1145:1706.F7.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272018 SAMEA4360569 1706.F7.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTGACTAGTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1624174 qiita_ptid_1145:1706.F7.3.prev qiita_ptid_1145:1706.F7.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272019 SAMEA4360570 1706.F7.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACGAGGCAACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1624175 qiita_ptid_1145:1706.F7.4.prev qiita_ptid_1145:1706.F7.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272020 SAMEA4360571 1706.F7.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTGGAACGGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1624176 qiita_ptid_1145:1706.F7.5.prev qiita_ptid_1145:1706.F7.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272021 SAMEA4360572 1706.F7.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCAGAACATCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1624177 qiita_ptid_1145:1706.F7.6.prev qiita_ptid_1145:1706.F7.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272022 SAMEA4360573 1706.F7.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGTGTAATTAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1624178 qiita_ptid_1145:1706.F7.7.prev qiita_ptid_1145:1706.F7.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272023 SAMEA4360574 1706.F7.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACACAAAGTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1624179 qiita_ptid_1145:1706.F7.8.prev qiita_ptid_1145:1706.F7.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272024 SAMEA4360575 1706.F7.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTGCTTCCTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G1 ERX1624180 qiita_ptid_1145:1706.F7.9.prev qiita_ptid_1145:1706.F7.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272025 SAMEA4360576 1706.F7.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AACTGTTCGCGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F7.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1624181 qiita_ptid_1145:1706.F8.0.prev qiita_ptid_1145:1706.F8.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272026 SAMEA4360577 1706.F8.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCCGTCTCGTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1624182 qiita_ptid_1145:1706.F8.1.prev qiita_ptid_1145:1706.F8.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272027 SAMEA4360578 1706.F8.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGACTCTAAACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1624183 qiita_ptid_1145:1706.F8.10.prev qiita_ptid_1145:1706.F8.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272028 SAMEA4360579 1706.F8.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTGACGTTAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1624184 qiita_ptid_1145:1706.F8.11.prev qiita_ptid_1145:1706.F8.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272029 SAMEA4360580 1706.F8.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGCAGCTATTGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1624185 qiita_ptid_1145:1706.F8.12.prev qiita_ptid_1145:1706.F8.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272030 SAMEA4360581 1706.F8.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGATTCGAGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1624186 qiita_ptid_1145:1706.F8.13.prev qiita_ptid_1145:1706.F8.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272031 SAMEA4360582 1706.F8.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTAGTGTCAACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1624187 qiita_ptid_1145:1706.F8.2.prev qiita_ptid_1145:1706.F8.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272032 SAMEA4360583 1706.F8.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGTAAGATGCCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1624188 qiita_ptid_1145:1706.F8.3.prev qiita_ptid_1145:1706.F8.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272033 SAMEA4360584 1706.F8.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGTCTAGTACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1624189 qiita_ptid_1145:1706.F8.4.prev qiita_ptid_1145:1706.F8.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272034 SAMEA4360585 1706.F8.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGGAAACATGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1624190 qiita_ptid_1145:1706.F8.5.prev qiita_ptid_1145:1706.F8.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272035 SAMEA4360586 1706.F8.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACAGCGCATAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1624191 qiita_ptid_1145:1706.F8.7.prev qiita_ptid_1145:1706.F8.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272036 SAMEA4360587 1706.F8.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCGTGGTATAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1624192 qiita_ptid_1145:1706.F8.8.prev qiita_ptid_1145:1706.F8.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272037 SAMEA4360588 1706.F8.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCATTCCACTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H1 ERX1624193 qiita_ptid_1145:1706.F8.9.prev qiita_ptid_1145:1706.F8.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272038 SAMEA4360589 1706.F8.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGTGTGTAACGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F8.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1624194 qiita_ptid_1145:1706.F9.0.prev qiita_ptid_1145:1706.F9.0.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272039 SAMEA4360590 1706.F9.0.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCATCAGAGTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.0 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1624195 qiita_ptid_1145:1706.F9.1.prev qiita_ptid_1145:1706.F9.1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272040 SAMEA4360591 1706.F9.1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGACAGCTATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 3 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 3C sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1624196 qiita_ptid_1145:1706.F9.10.prev qiita_ptid_1145:1706.F9.10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272041 SAMEA4360592 1706.F9.10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCGGAAATTGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1624197 qiita_ptid_1145:1706.F9.11.prev qiita_ptid_1145:1706.F9.11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272042 SAMEA4360593 1706.F9.11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGGTACAGGGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 6 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 6F sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1624198 qiita_ptid_1145:1706.F9.12.prev qiita_ptid_1145:1706.F9.12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272043 SAMEA4360594 1706.F9.12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTCCTTGTGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 2 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 2B sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1624199 qiita_ptid_1145:1706.F9.13.prev qiita_ptid_1145:1706.F9.13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272044 SAMEA4360595 1706.F9.13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTCGATAAGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 9 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 9I sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1624200 qiita_ptid_1145:1706.F9.2.prev qiita_ptid_1145:1706.F9.2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272045 SAMEA4360596 1706.F9.2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGAGACTGATT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1624201 qiita_ptid_1145:1706.F9.3.prev qiita_ptid_1145:1706.F9.3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272046 SAMEA4360597 1706.F9.3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCGATGTAAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1624202 qiita_ptid_1145:1706.F9.4.prev qiita_ptid_1145:1706.F9.4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272047 SAMEA4360598 1706.F9.4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAGTCATTGAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 7 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 7G sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1624203 qiita_ptid_1145:1706.F9.5.prev qiita_ptid_1145:1706.F9.5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272048 SAMEA4360599 1706.F9.5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGCTCATCAGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 1 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 1A sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1624204 qiita_ptid_1145:1706.F9.6.prev qiita_ptid_1145:1706.F9.6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272049 SAMEA4360600 1706.F9.6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAACGCACTAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 8 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 8H sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1624205 qiita_ptid_1145:1706.F9.7.prev qiita_ptid_1145:1706.F9.7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272050 SAMEA4360601 1706.F9.7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCAGACCGCTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 4 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 4D sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6 ERX1624206 qiita_ptid_1145:1706.F9.8.prev qiita_ptid_1145:1706.F9.8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272051 SAMEA4360602 1706.F9.8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATCAAGCATAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A2 ERX1624207 qiita_ptid_1145:1706.F9.9.prev qiita_ptid_1145:1706.F9.9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272052 SAMEA4360603 1706.F9.9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGACGTAGCGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name F9.9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 5 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L004 samp_size .1,g sample_plate 5E sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1624208 qiita_ptid_1145:1706.ID1.prev qiita_ptid_1145:1706.ID1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272053 SAMEA4360604 1706.ID1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GATCAACCCACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1624209 qiita_ptid_1145:1706.ID12.prev qiita_ptid_1145:1706.ID12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272054 SAMEA4360605 1706.ID12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGACGCATTTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1624210 qiita_ptid_1145:1706.ID14.prev qiita_ptid_1145:1706.ID14.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272055 SAMEA4360606 1706.ID14.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACAATGTCACAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID14 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1624211 qiita_ptid_1145:1706.ID17.prev qiita_ptid_1145:1706.ID17.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272056 SAMEA4360607 1706.ID17.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAACGATCATGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID17 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1624212 qiita_ptid_1145:1706.ID19.prev qiita_ptid_1145:1706.ID19.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272057 SAMEA4360608 1706.ID19.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATGCGAGACTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID19 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1624213 qiita_ptid_1145:1706.ID21.prev qiita_ptid_1145:1706.ID21.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272058 SAMEA4360609 1706.ID21.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCCGGATTTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID21 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1624214 qiita_ptid_1145:1706.ID5.prev qiita_ptid_1145:1706.ID5.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272059 SAMEA4360610 1706.ID5.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGTAGGAGGCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID5 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1624215 qiita_ptid_1145:1706.ID7.prev qiita_ptid_1145:1706.ID7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272060 SAMEA4360611 1706.ID7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGGAAACCATTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1624216 qiita_ptid_1145:1706.ID8.prev qiita_ptid_1145:1706.ID8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272061 SAMEA4360612 1706.ID8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACTTACGCCACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1624217 qiita_ptid_1145:1706.ID9.prev qiita_ptid_1145:1706.ID9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272062 SAMEA4360613 1706.ID9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGGTTTCTGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name ID9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 11 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 11K sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1624218 qiita_ptid_1145:1706.PD1.prev qiita_ptid_1145:1706.PD1.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272063 SAMEA4360614 1706.PD1.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGGTCTTACGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD1 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A5 ERX1624219 qiita_ptid_1145:1706.PD10.prev qiita_ptid_1145:1706.PD10.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272064 SAMEA4360615 1706.PD10.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGCGAACTGAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD10 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B6 ERX1624220 qiita_ptid_1145:1706.PD11.prev qiita_ptid_1145:1706.PD11.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272065 SAMEA4360616 1706.PD11.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAATCGAAGCT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD11 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C6 ERX1624221 qiita_ptid_1145:1706.PD12.prev qiita_ptid_1145:1706.PD12.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272066 SAMEA4360617 1706.PD12.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAGGACGTATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD12 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D6 ERX1624222 qiita_ptid_1145:1706.PD13.prev qiita_ptid_1145:1706.PD13.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272067 SAMEA4360618 1706.PD13.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTAGCAGTATGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD13 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E6 ERX1624223 qiita_ptid_1145:1706.PD14.prev qiita_ptid_1145:1706.PD14.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272068 SAMEA4360619 1706.PD14.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCACTTGAGAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD14 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F6 ERX1624224 qiita_ptid_1145:1706.PD15.prev qiita_ptid_1145:1706.PD15.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272069 SAMEA4360620 1706.PD15.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCAAGACCTCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD15 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G6 ERX1624225 qiita_ptid_1145:1706.PD16.prev qiita_ptid_1145:1706.PD16.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272070 SAMEA4360621 1706.PD16.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTGGAATTAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD16 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H6 ERX1624226 qiita_ptid_1145:1706.PD17.prev qiita_ptid_1145:1706.PD17.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272071 SAMEA4360622 1706.PD17.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCAAGTGTGAGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD17 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A7 ERX1624227 qiita_ptid_1145:1706.PD18.prev qiita_ptid_1145:1706.PD18.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272072 SAMEA4360623 1706.PD18.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CGGCACTATCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD18 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B7 ERX1624228 qiita_ptid_1145:1706.PD19.prev qiita_ptid_1145:1706.PD19.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272073 SAMEA4360624 1706.PD19.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTGCAGTAAGTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD19 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C7 ERX1624229 qiita_ptid_1145:1706.PD2.prev qiita_ptid_1145:1706.PD2.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272074 SAMEA4360625 1706.PD2.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GACCGATAGGGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD2 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B5 ERX1624230 qiita_ptid_1145:1706.PD20.prev qiita_ptid_1145:1706.PD20.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272075 SAMEA4360626 1706.PD20.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAAAGGTGAGAA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD20 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D7 ERX1624231 qiita_ptid_1145:1706.PD21.prev qiita_ptid_1145:1706.PD21.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272076 SAMEA4360627 1706.PD21.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTAATGGCAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD21 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E7 ERX1624232 qiita_ptid_1145:1706.PD22.prev qiita_ptid_1145:1706.PD22.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272077 SAMEA4360628 1706.PD22.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCACTTCATTTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD22 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F7 ERX1624233 qiita_ptid_1145:1706.PD23.prev qiita_ptid_1145:1706.PD23.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272078 SAMEA4360629 1706.PD23.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGTTACGTTCC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD23 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G7 ERX1624234 qiita_ptid_1145:1706.PD24.prev qiita_ptid_1145:1706.PD24.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272079 SAMEA4360630 1706.PD24.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TGAGACCCTACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD24 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H7 ERX1624235 qiita_ptid_1145:1706.PD27.prev qiita_ptid_1145:1706.PD27.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272080 SAMEA4360631 1706.PD27.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCGGTCAACCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD27 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A8 ERX1624236 qiita_ptid_1145:1706.PD28.prev qiita_ptid_1145:1706.PD28.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272081 SAMEA4360632 1706.PD28.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGGTGGTGGAGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD28 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B8 ERX1624237 qiita_ptid_1145:1706.PD29.prev qiita_ptid_1145:1706.PD29.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272082 SAMEA4360633 1706.PD29.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TATAGGCTCCGC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD29 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C8 ERX1624238 qiita_ptid_1145:1706.PD3.prev qiita_ptid_1145:1706.PD3.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272083 SAMEA4360634 1706.PD3.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGTGAGGAACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD3 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C5 ERX1624239 qiita_ptid_1145:1706.PD30.prev qiita_ptid_1145:1706.PD30.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272084 SAMEA4360635 1706.PD30.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAATATACCTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD30 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D8 ERX1624240 qiita_ptid_1145:1706.PD31.prev qiita_ptid_1145:1706.PD31.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272085 SAMEA4360636 1706.PD31.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTATGGAGCTAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD31 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E8 ERX1624241 qiita_ptid_1145:1706.PD32.prev qiita_ptid_1145:1706.PD32.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272086 SAMEA4360637 1706.PD32.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGAATCCACCAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD32 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F8 ERX1624242 qiita_ptid_1145:1706.PD33.prev qiita_ptid_1145:1706.PD33.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272087 SAMEA4360638 1706.PD33.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGTTCGAGATA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD33 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G8 ERX1624243 qiita_ptid_1145:1706.PD34.prev qiita_ptid_1145:1706.PD34.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272088 SAMEA4360639 1706.PD34.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AAGTATCCTGCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD34 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H8 ERX1624244 qiita_ptid_1145:1706.PD35.prev qiita_ptid_1145:1706.PD35.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272089 SAMEA4360640 1706.PD35.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCCTATTGCGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD35 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A9 ERX1624245 qiita_ptid_1145:1706.PD36.prev qiita_ptid_1145:1706.PD36.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272090 SAMEA4360641 1706.PD36.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATTCCCAGAACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD36 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B9 ERX1624246 qiita_ptid_1145:1706.PD37.prev qiita_ptid_1145:1706.PD37.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272091 SAMEA4360642 1706.PD37.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ATCGTGTGTTGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD37 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C9 ERX1624247 qiita_ptid_1145:1706.PD38.prev qiita_ptid_1145:1706.PD38.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272092 SAMEA4360643 1706.PD38.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTCGCTTGCACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD38 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D9 ERX1624248 qiita_ptid_1145:1706.PD39.prev qiita_ptid_1145:1706.PD39.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272093 SAMEA4360644 1706.PD39.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CCTTCTGTATAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD39 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E9 ERX1624249 qiita_ptid_1145:1706.PD4.prev qiita_ptid_1145:1706.PD4.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272094 SAMEA4360645 1706.PD4.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGTCTAGGTCTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD4 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D5 ERX1624250 qiita_ptid_1145:1706.PD40.prev qiita_ptid_1145:1706.PD40.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272095 SAMEA4360646 1706.PD40.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCAAGTCAAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD40 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F9 ERX1624251 qiita_ptid_1145:1706.PD41.prev qiita_ptid_1145:1706.PD41.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272096 SAMEA4360647 1706.PD41.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATGTCACCAGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD41 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G9 ERX1624252 qiita_ptid_1145:1706.PD42.prev qiita_ptid_1145:1706.PD42.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272097 SAMEA4360648 1706.PD42.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAATGGTCGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD42 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H9 ERX1624253 qiita_ptid_1145:1706.PD43.prev qiita_ptid_1145:1706.PD43.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272098 SAMEA4360649 1706.PD43.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCCGTTCGTTTA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD43 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A10 ERX1624254 qiita_ptid_1145:1706.PD44.prev qiita_ptid_1145:1706.PD44.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272099 SAMEA4360650 1706.PD44.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGACGTTGCTAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD44 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B10 ERX1624255 qiita_ptid_1145:1706.PD45.prev qiita_ptid_1145:1706.PD45.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272100 SAMEA4360651 1706.PD45.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTTCCGCAGACA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD45 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C10 ERX1624256 qiita_ptid_1145:1706.PD46.prev qiita_ptid_1145:1706.PD46.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272101 SAMEA4360652 1706.PD46.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTACCACGAAG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD46 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D10 ERX1624257 qiita_ptid_1145:1706.PD47.prev qiita_ptid_1145:1706.PD47.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272102 SAMEA4360653 1706.PD47.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACGCTGTCGGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD47 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E10 ERX1624258 qiita_ptid_1145:1706.PD48.prev qiita_ptid_1145:1706.PD48.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272103 SAMEA4360654 1706.PD48.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTACCTAGCCTG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD48 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F10 ERX1624259 qiita_ptid_1145:1706.PD49.prev qiita_ptid_1145:1706.PD49.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272104 SAMEA4360655 1706.PD49.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAGCCTGCAAAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD49 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G10 ERX1624260 qiita_ptid_1145:1706.PD50.prev qiita_ptid_1145:1706.PD50.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272105 SAMEA4360656 1706.PD50.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACACATAAGTCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD50 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H10 ERX1624261 qiita_ptid_1145:1706.PD51.prev qiita_ptid_1145:1706.PD51.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272106 SAMEA4360657 1706.PD51.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode ACCACCGTAACC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD51 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A11 ERX1624262 qiita_ptid_1145:1706.PD52.prev qiita_ptid_1145:1706.PD52.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272107 SAMEA4360658 1706.PD52.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AGAATAGCGCTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD52 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id B11 ERX1624263 qiita_ptid_1145:1706.PD53.prev qiita_ptid_1145:1706.PD53.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272108 SAMEA4360659 1706.PD53.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCACTATACGCA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD53 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C11 ERX1624264 qiita_ptid_1145:1706.PD54.prev qiita_ptid_1145:1706.PD54.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272109 SAMEA4360660 1706.PD54.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode AATATCGGGATC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD54 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D11 ERX1624265 qiita_ptid_1145:1706.PD55.prev qiita_ptid_1145:1706.PD55.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272110 SAMEA4360661 1706.PD55.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CTCGTTTCAGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD55 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E11 ERX1624266 qiita_ptid_1145:1706.PD56.prev qiita_ptid_1145:1706.PD56.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272111 SAMEA4360662 1706.PD56.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CACTGAGTACGT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD56 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F11 ERX1624267 qiita_ptid_1145:1706.PD57.prev qiita_ptid_1145:1706.PD57.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272112 SAMEA4360663 1706.PD57.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCAAGTACCG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD57 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G11 ERX1624268 qiita_ptid_1145:1706.PD58.prev qiita_ptid_1145:1706.PD58.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272113 SAMEA4360664 1706.PD58.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TACTGCCAGTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD58 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H11 ERX1624269 qiita_ptid_1145:1706.PD59.prev qiita_ptid_1145:1706.PD59.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272114 SAMEA4360665 1706.PD59.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CATTTCGCACTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD59 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A12 ERX1624270 qiita_ptid_1145:1706.PD6.prev qiita_ptid_1145:1706.PD6.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272115 SAMEA4360666 1706.PD6.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GGATGCAGGATG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD6 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F5 ERX1624271 qiita_ptid_1145:1706.PD61.prev qiita_ptid_1145:1706.PD61.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272116 SAMEA4360667 1706.PD61.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCTGGGCATTGA center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD61 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id C12 ERX1624272 qiita_ptid_1145:1706.PD62.prev qiita_ptid_1145:1706.PD62.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272117 SAMEA4360668 1706.PD62.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TAGTGCATTCGG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD62 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id D12 ERX1624273 qiita_ptid_1145:1706.PD63.prev qiita_ptid_1145:1706.PD63.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272118 SAMEA4360669 1706.PD63.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCGAACCTATAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD63 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id E12 ERX1624274 qiita_ptid_1145:1706.PD64.prev qiita_ptid_1145:1706.PD64.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272119 SAMEA4360670 1706.PD64.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TCAAGCAATACG center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD64 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id F12 ERX1624275 qiita_ptid_1145:1706.PD65.prev qiita_ptid_1145:1706.PD65.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272120 SAMEA4360671 1706.PD65.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GCTTCTCTCACT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD65 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G12 ERX1624276 qiita_ptid_1145:1706.PD66.prev qiita_ptid_1145:1706.PD66.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272121 SAMEA4360672 1706.PD66.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GAGTTTACGGTC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD66 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H12 ERX1624277 qiita_ptid_1145:1706.PD7.prev qiita_ptid_1145:1706.PD7.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272122 SAMEA4360673 1706.PD7.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode GTTCTGCTTGTT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD7 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id G5 ERX1624278 qiita_ptid_1145:1706.PD8.prev qiita_ptid_1145:1706.PD8.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272123 SAMEA4360674 1706.PD8.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode TTGCCCTTTGAT center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD8 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id H5 ERX1624279 qiita_ptid_1145:1706.PD9.prev qiita_ptid_1145:1706.PD9.prev ERP016674 pigs were fed a diet of purple or yellow baked potatoes for 15 wks. ERS1272124 SAMEA4360675 1706.PD9.prev OTHER METAGENOMIC PCR Illumina HiSeq V4, 515f, 806rbc primers Illumina HiSeq 2000 barcode CAAGTCGAATAC center_name U Penn center_project_name Jairam purple potato pigs emp_status EMP_processed experiment_center CCME experiment_title Cultivar and processing effect on the plant-food metabolome manifest in mammalian proteome and phenotype linker GT orig_name PD9 pcr_primers FWD:GTGCCAGCMGCCGCGGTAA; REV:GGACTACHVGGGTWTCTAAT primer GTGCCAGCMGCCGCGGTAA primer_plate 10 run_center CCME run_date 6/27/13 run_prefix Jairam_PPS_16S_NoIndex_L005 samp_size .1,g sample_plate 10J sequencing_meth sequencing by synthesis target_gene 16S rRNA target_subfragment V4 well_id A6