ERS1576368 SAMEA103690168 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:39Z External Id SAMEA103690168 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:39Z INSDC status public Submitter Id E-MTAB-5549:1445_mut_mucosa broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1445 organism part gastric mucosa phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1445_mut_mucosa scientific_name Mus musculus ERS1576369 SAMEA103690918 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103690918 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1449_mut_mucosa broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1449 organism part gastric mucosa phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1449_mut_mucosa scientific_name Mus musculus ERS1576370 SAMEA103691668 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103691668 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1454_mut_mucosa broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1454 organism part gastric mucosa phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1454_mut_mucosa scientific_name Mus musculus ERS1576371 SAMEA103692418 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103692418 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1547_mut_mucosa broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1547 organism part gastric mucosa phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1547_mut_mucosa scientific_name Mus musculus ERS1576372 SAMEA103693168 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103693168 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1441_wt_mucosa broker name ArrayExpress common name house mouse disease normal genotype Lkb1+/+ individual 1441 organism part gastric mucosa phenotype wild type sample name E-MTAB-5549:1441_wt_mucosa scientific_name Mus musculus ERS1576373 SAMEA103693918 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103693918 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1447_wt_mucosa broker name ArrayExpress common name house mouse disease normal genotype Lkb1+/+ individual 1447 organism part gastric mucosa phenotype wild type sample name E-MTAB-5549:1447_wt_mucosa scientific_name Mus musculus ERS1576374 SAMEA103694668 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103694668 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1453_wt_mucosa broker name ArrayExpress common name house mouse disease normal genotype Lkb1+/+ individual 1453 organism part gastric mucosa phenotype wild type sample name E-MTAB-5549:1453_wt_mucosa scientific_name Mus musculus ERS1576375 SAMEA103695418 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103695418 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1548_wt_mucosa broker name ArrayExpress common name house mouse disease normal genotype Lkb1+/+ individual 1548 organism part gastric mucosa phenotype wild type sample name E-MTAB-5549:1548_wt_mucosa scientific_name Mus musculus ERS1576376 SAMEA103696168 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103696168 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1549_wt_mucosa broker name ArrayExpress common name house mouse disease normal genotype Lkb1+/+ individual 1549 organism part gastric mucosa phenotype wild type sample name E-MTAB-5549:1549_wt_mucosa scientific_name Mus musculus ERS1576377 SAMEA103696918 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103696918 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1445_mut_polyp_1 broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1445 organism part polyp phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1445_mut_polyp_1 scientific_name Mus musculus ERS1576378 SAMEA103697668 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103697668 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1445_mut_polyp_2 broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1445 organism part polyp phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1445_mut_polyp_2 scientific_name Mus musculus ERS1576379 SAMEA103698418 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103698418 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1449_mut_polyp broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1449 organism part polyp phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1449_mut_polyp scientific_name Mus musculus ERS1576380 SAMEA103699168 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103699168 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1454_mut_polyp_1 broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1454 organism part polyp phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1454_mut_polyp_1 scientific_name Mus musculus ERS1576381 SAMEA103699918 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103699918 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1454_mut_polyp_2 broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1454 organism part polyp phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1454_mut_polyp_2 scientific_name Mus musculus ERS1576382 SAMEA103700668 10090 Mus musculus Protocols: RNA from 6 polyps and 4 adjacent mucosa samples was isolated from 4 tumor-bearing mice (Lkb1FspKO/FspKO) and normal mucosa samples from 5 wild-type littermates. Total RNA from polyps and mucosa samples was extracted using RNAeasy plus kit (Qiagen). Libraries were constructed according to Illumina's guidelines, using a Truseq Stranded Total RNA Library Prep Kit with Ribo-Zero rRNA removal kit. ENA-FIRST-PUBLIC 2018-01-05T17:02:56Z ENA-LAST-UPDATE 2017-03-03T15:48:40Z External Id SAMEA103700668 INSDC center name Research Programs Unit University of Helsinki INSDC first public 2018-01-05T17:02:56Z INSDC last update 2017-03-03T15:48:40Z INSDC status public Submitter Id E-MTAB-5549:1547_mut_polyp broker name ArrayExpress common name house mouse disease Peutz-Jeghers syndrome genotype Fsp1-Cre;Lkb1fl/fl individual 1547 organism part polyp phenotype fibroblast-specific Lkb1 knockout sample name E-MTAB-5549:1547_mut_polyp scientific_name Mus musculus