SRX001696 256.WR16958.Solexa-5404.30EBAAAXX080902.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000042 NA11830 Solexa-5404 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25092.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3AR BI project name G1514 BI work request ID 16958 SRX001737 256.WR17564.Solexa-5419.30D74AAXX080928.P SRP000031 1000Genomes Project Pilot 1 WGSWithRef Sequence 1 lanes on Illumina SRS000041 Solexa-5419 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR sample ID 25107.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B7 BI project name G1529 BI work request ID 17564 SRX002260 256.WR16835.Solexa-5077.303B5AAXX080714.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000096 NA18499 Solexa-5077 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 24682.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWK BI project name G1487 BI work request ID 16835 SRX002261 23064.WR24211.Solexa-50805.805NCABXX101217.P 8e6da706-4e57-40c2-b081-8d26983e74d4 SRP001525 PRJNA42573 Homo_sapiens_PUR_Puerto_Rican_in_Puerto_Rico_lcl_low_coverage_PUR_WGS_Monoisolate 1000 Genomes Low Coverage Sequencing - Puerto Rican Population SRS010829 SAMN00009198 HG01241 Solexa-50805 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2010-12-25 19:20:34.0 N/A GAPipeline RTA 1.7.48 Sequencer Application 1.1.37.8 gssr_id 81801.0 lsid broadinstitute.org:bsp.prod.sample:1NRHI material_type DNA:DNA Genomic project G5037 root_sample_id SM-17A7X sample_id SM-1NRHI work_request 24211 SRX002262 235197.WR36419.Pond-243869.C25HAACXX130609.P 8b677d83-8142-4d4f-a413-ead4a59c9f32 SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of unclassified Bacteria (miscellaneous) via random selection SRS372958 PRJNA218187.11341_ST_14_1 Pond-243869 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 12:57:28.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325396.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN8 material_type DNA:DNA Genomic product_order PDO-1159 product_part_number P-WG-0004 project G36696 research_project RP-342 root_sample_id SM-2VRGN sample_id SM-4CFN8 work_request 36419 SRX002263 127674.WR24041.Solexa-56804.B00P8ABXX110204.P 276f6075-c994-4a18-99c8-bfc750e69714 SRP004074 PRJNA59839 Homo_sapiens_YRI_Yoruba_in_Ibadan_Nigeria_HapMap_population_exome_lcl_YRI_WEX_Monoisolate Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS000803 SAMN00000573 NA19247 GM19247 Solexa-56804 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2011-02-16 05:16:23.0 N/A GAPipeline unknown gssr_id 78728.0 lsid broadinstitute.org:bsp.prod.sample:1MOEG material_type DNA:DNA Somatic project C480 root_sample_id SM-VDXC sample_id SM-1MOEG target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 24041 SRX002264 127676.WR24041.Solexa-56840.B00P8ABXX110204.P SRP004076 1000 Genomes (JPT) Japanese exome sequencing Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS001478 NA18982 Solexa-56840 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 BI GSSR sample ID 78711.0 BI GSSR sample LSID broadinstitute.org:bsp.prod.sample:1MODY BI project name C467 BI work request ID 24041 SRX002265 127676.WR24041.Solexa-56815.B00P8ABXX110204.P SRP004076 1000 Genomes (JPT) Japanese exome sequencing Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS000744 NA19012 Solexa-56815 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 BI GSSR sample ID 78720.0 BI GSSR sample LSID broadinstitute.org:bsp.prod.sample:1MOE8 BI project name C467 BI work request ID 24041 SRX002266 2064389.WR36671.Solexa-166680.H0T24ADXX130627.P d848bb12-1b90-453b-aaf6-2cc26e9d0d84 SRP021312 PRJNA198106 TB ARC KRITH Mycobacterium_tuberculosis_TKK_01_0004_ltp_K835_WGS_Monoisolate Illumina sequencing of Mycobacterium Tuberculosis TKK-01-0004 via random selection SRS415241 SAMN02053744 TKK-01-0004 Solexa-166680 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-28 19:57:08.0 N/A GAPipeline RTA1.17.20 Sequencer Application 2.0.5 gssr_id 340227.0 lsid broadinstitute.org:bsp.prod.sample:4GREW material_type DNA:DNA Somatic project G28645 root_sample_id SM-2Z9PN sample_id SM-4GREW work_request 36671 SRX002267 256.WR16960.Solexa-5406.303HLAAXX080714.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000043 Solexa-5406 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25094.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3AT BI project name G1516 BI work request ID 16960 SRX002268 127676.WR24041.Solexa-56821.B00P8ABXX110204.P SRP004076 1000 Genomes (JPT) Japanese exome sequencing Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS000736 NA18999 Solexa-56821 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 BI GSSR sample ID 78715.0 BI GSSR sample LSID broadinstitute.org:bsp.prod.sample:1MOE3 BI project name C467 BI work request ID 24041 SRX002269 127674.WR24041.Solexa-56832.B00P8ABXX110204.P 1eeef738-96f4-4e03-8556-ead479622182 SRP004074 PRJNA59839 Homo_sapiens_YRI_Yoruba_in_Ibadan_Nigeria_HapMap_population_exome_lcl_YRI_WEX_Monoisolate Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS000202 SAMN00001684 NA19172 GM19172 Solexa-56832 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2011-02-16 05:16:23.0 N/A GAPipeline unknown gssr_id 78724.0 lsid broadinstitute.org:bsp.prod.sample:1MOEC material_type DNA:DNA Genomic project C480 root_sample_id SM-L5OC sample_id SM-1MOEC target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 24041 SRX002270 2097111.WR36671.Solexa-166673.H0T24ADXX130627.P 76b9e19b-02fc-4c9a-9978-fdbea73d5052 SRP026510 PRJNA200324 TB ARC Belarus Mycobacterium_tuberculosis_minsk0001_ltp_L151_WGS_Monoisolate Illumina sequencing of Mycobacterium tuberculosis minsk0001 via random selection SRS454493 SAMN02058519 1424.2012 Solexa-166673 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-28 19:57:08.0 N/A GAPipeline RTA1.17.20 Sequencer Application 2.0.5 gssr_id 340221.0 lsid broadinstitute.org:bsp.prod.sample:4GREQ material_type DNA:DNA Somatic product_order PDO-1107 product_part_number P-MCV-0001 project G36106 research_project RP-114 root_sample_id SM-3S1OS sample_id SM-4GREQ work_request 36671 SRX002271 127674.WR24041.Solexa-56817.B00P8ABXX110204.P 954cc4ba-d904-4286-a95b-5ac65e4496d1 SRP004074 PRJNA59839 Homo_sapiens_YRI_Yoruba_in_Ibadan_Nigeria_HapMap_population_exome_lcl_YRI_WEX_Monoisolate Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS000706 SAMN00000476 NA18873 GM18873 Solexa-56817 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2011-02-16 05:16:23.0 N/A GAPipeline unknown gssr_id 78703.0 lsid broadinstitute.org:bsp.prod.sample:1MODQ material_type DNA:DNA Somatic project C480 root_sample_id SM-VDW9 sample_id SM-1MODQ target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 24041 SRX002272 127674.WR24041.Solexa-56811.B00P8ABXX110204.P c1512d99-d5d0-47e4-a764-64e88e6cb6dc SRP004074 PRJNA59839 Homo_sapiens_YRI_Yoruba_in_Ibadan_Nigeria_HapMap_population_exome_lcl_YRI_WEX_Monoisolate Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS000149 SAMN00001631 NA18912 GM18912 Solexa-56811 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2011-02-16 05:16:23.0 N/A GAPipeline unknown gssr_id 78707.0 lsid broadinstitute.org:bsp.prod.sample:1MODU material_type DNA:DNA Genomic primary_disease Control project C480 root_sample_id SM-L5OB sample_id SM-1MODU target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 24041 SRX002273 127676.WR24041.Solexa-56829.B00P8ABXX110204.P SRP004076 1000 Genomes (JPT) Japanese exome sequencing Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS001484 NA18989 Solexa-56829 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 BI GSSR sample ID 78714.0 BI GSSR sample LSID broadinstitute.org:bsp.prod.sample:1MOE2 BI project name C467 BI work request ID 24041 SRX002274 256.WR16973.Solexa-5419.303KNAAXX080707.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence on Illumina SRS000041 Solexa-5419 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25107.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B7 BI project name G1529 BI work request ID 16973 SRX002275 2064393.WR36671.Solexa-166675.H0T24ADXX130627.P 34998aea-e639-49f4-a3d9-f0a42ac64af9 SRP021320 PRJNA198110 TB ARC KRITH Mycobacterium_tuberculosis_TKK_01_0009_ltp_K839_WGS_Monoisolate Illumina sequencing of Mycobacterium Tuberculosis TKK-01-0009 via random selection SRS415249 SAMN02053748 TKK-01-0009 Solexa-166675 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-28 19:57:08.0 N/A GAPipeline RTA1.17.20 Sequencer Application 2.0.5 gssr_id 340223.0 lsid broadinstitute.org:bsp.prod.sample:4GRES material_type DNA:DNA Somatic project G28647 root_sample_id SM-2Z9PO sample_id SM-4GRES work_request 36671 SRX002276 82866.WR24424.Pond-53153.B00EBABXX110216.tagged_34.P f77ce0fe-ad17-4d77-8f77-033a9e35af49 SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN1175 via random selection SRS174171 BROAD:SEQUENCING_SAMPLE:78605.0 Pond-53153 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode AACTTGAC 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78605.1 lsid BROAD:SEQUENCING_SAMPLE:78605.1 material_type Genomic DNA project G8942 work_request 24424 SRX002277 82866.WR24424.Pond-53165.B00EBABXX110216.tagged_52.P c5f0f45e-f204-4614-8ce0-d6af7136e1ac SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN1151 via random selection SRS174164 BROAD:SEQUENCING_SAMPLE:78608.0 Pond-53165 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode AAGGATGT 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78608.1 lsid BROAD:SEQUENCING_SAMPLE:78608.1 material_type Genomic DNA project G8939 work_request 24424 SRX002278 2097112.WR36671.Solexa-166668.H0T24ADXX130627.P 132aec49-35fa-42b9-947e-8cba38e3fdc8 SRP026515 PRJNA200325 TB ARC Belarus Mycobacterium_tuberculosis_minsk0002_ltp_L152_WGS_Monoisolate Illumina sequencing of Mycobacterium tuberculosis minsk0002 via random selection SRS454498 SAMN02058520 8205.2012 Solexa-166668 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-28 19:57:08.0 N/A GAPipeline RTA1.17.20 Sequencer Application 2.0.5 gssr_id 340218.0 lsid broadinstitute.org:bsp.prod.sample:4GREM material_type DNA:DNA Somatic product_order PDO-1107 product_part_number P-MCV-0001 project G36105 research_project RP-114 root_sample_id SM-3S1OR sample_id SM-4GREM work_request 36671 SRX002279 82866.WR24424.Pond-53135.B00EBABXX110216.tagged_117.P c18e3d56-f45b-4314-973e-7392f079127d SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN2925 via random selection SRS174167 BROAD:SEQUENCING_SAMPLE:78601.0 Pond-53135 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode ACCAACTG 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78601.1 lsid BROAD:SEQUENCING_SAMPLE:78601.1 material_type Genomic DNA project G8946 work_request 24424 SRX002281 256.WR16964.Solexa-5410.303L2AAXX080707.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence on Illumina SRS000064 Solexa-5410 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25098.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3AX BI project name G1520 BI work request ID 16964 SRX002282 235197.WR36419.Pond-243868.C25G5ACXX130609.P c2668cce-f07b-435d-a90d-e7de4032afbd SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of human gut metagenome via random selection SRS414257 10671-ST-5 SAMN01828420 Pond-243868 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 12:59:40.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325357.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN7 material_type DNA:DNA Somatic product_order PDO-1159 product_part_number P-WG-0004 project G36688 research_project RP-342 root_sample_id SM-2ISJO sample_id SM-4CFN7 work_request 36419 SRX002283 82866.WR24424.Pond-53152.B00EBABXX110216.tagged_190.P ecbf83f0-294e-4d55-88cd-ddb4999e134c SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN2738 via random selection SRS174163 BROAD:SEQUENCING_SAMPLE:78598.0 Pond-53152 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode AGCAATTC 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78598.1 lsid BROAD:SEQUENCING_SAMPLE:78598.1 material_type Genomic DNA project G8949 work_request 24424 SRX002284 82866.WR24424.Pond-53142.B00EBABXX110216.tagged_214.P 976b27d3-4a62-49d4-8cfc-8685a7661398 SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN139 via random selection SRS174155 BROAD:SEQUENCING_SAMPLE:78619.0 Pond-53142 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode AGGATCTA 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78619.1 lsid BROAD:SEQUENCING_SAMPLE:78619.1 material_type Genomic DNA project G8928 work_request 24424 SRX002285 44470.WR24094.Pond-47926.806R0ABXX101219.tagged_375.P a94f43c5-6ff9-4d7a-aa83-8202a5608a23 SRP002538 PRJNA46249 Comparative Genomics of Microsporidia ltp_E1K_WGS_Multispecies Illumina sequencing of Encephalitozoon cuniculi via random selection SRS174041 PRJNA210750.Ec2 Pond-47926 WGS GENOMIC RANDOM 210 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CATGCTTA 2 reverse Application Read Reverse 110 Illumina HiSeq 2000 2010-12-28 22:16:53.0 N/A GAPipeline RTA 1.7.48 Sequencer Application 1.1.37.8 analysis_type AssemblyWithReference gssr_id 41890.1 library_type WholeGenomeShotgun lsid BROAD:SEQUENCING_SAMPLE:41890.1 material_type Genomic DNA project G4127 work_request 24094 SRX002286 235197.WR36419.Pond-243867.D26W1ACXX130609.P 2b396cc7-4ae8-4746-bb85-b625acffeb33 SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of human gut metagenome via random selection SRS414230 10551-ST-14 SAMN01828407 Pond-243867 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 15:58:55.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325356.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN6 material_type DNA:DNA Somatic product_order PDO-1159 product_part_number P-WG-0004 project G36680 research_project RP-342 root_sample_id SM-2ISHN sample_id SM-4CFN6 work_request 36419 SRX002287 44470.WR24094.Pond-47925.806R0ABXX101219.tagged_504.P bd6e7adb-3775-4492-9009-0f8a44945a27 SRP002538 PRJNA46249 Comparative Genomics of Microsporidia ltp_E1K_WGS_Multispecies Illumina sequencing of Encephalitozoon cuniculi via random selection SRS174042 PRJNA210750.Ec3 Pond-47925 WGS GENOMIC RANDOM 210 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CTACCAGG 2 reverse Application Read Reverse 110 Illumina HiSeq 2000 2010-12-28 22:16:53.0 N/A GAPipeline RTA 1.7.48 Sequencer Application 1.1.37.8 analysis_type AssemblyWithReference gssr_id 74074.1 library_type WholeGenomeShotgun lsid BROAD:SEQUENCING_SAMPLE:74074.1 material_type Genomic DNA project G4126 work_request 24094 SRX002288 256.WR16830.Solexa-5072.3041JAAXX080721.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence on Illumina SRS000093 NA18486 Solexa-5072 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR sample ID 24677.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWF BI project name G1482 BI work request ID 16830 SRX002289 44470.WR24094.Pond-47927.806R0ABXX101219.tagged_630.P 40bd94c9-ade0-4766-a7ee-f1d6984d3d9c SRP002538 PRJNA46249 Comparative Genomics of Microsporidia ltp_E1K_WGS_Multispecies Illumina sequencing of Encephalitozoon cuniculi via random selection SRS174043 PRJNA210750.Ec1 Pond-47927 WGS GENOMIC RANDOM 210 0 forward Application Read Forward 1 1 barcode Technical Read BarCode GCACATCT 2 reverse Application Read Reverse 110 Illumina HiSeq 2000 2010-12-28 22:16:53.0 N/A GAPipeline RTA 1.7.48 Sequencer Application 1.1.37.8 analysis_type AssemblyWithReference gssr_id 41891.3 library_type WholeGenomeShotgun lsid BROAD:SEQUENCING_SAMPLE:41891.3 material_type Genomic DNA project G4128 work_request 24094 SRX002290 235197.WR36419.Pond-243867.C25G5ACXX130609.P 49b5dd15-ffb7-48a4-8fa9-38ee43331f1c SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of human gut metagenome via random selection SRS414230 10551-ST-14 SAMN01828407 Pond-243867 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 12:59:40.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325356.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN6 material_type DNA:DNA Somatic product_order PDO-1159 product_part_number P-WG-0004 project G36680 research_project RP-342 root_sample_id SM-2ISHN sample_id SM-4CFN6 work_request 36419 SRX002291 12859.WR17370.454-1700.645093081022.P.UNMATCHED 64172be0-adf0-4ce7-8ecd-878cdf6cd7ab SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli E1114 via random selection SRS005127 454-1700 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCACAC 2 forward Application Read Forward 11 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-03-05 15:05:24.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25784.3 lsid BROAD:SEQUENCING_SAMPLE:25784.3 material_type Genomic DNA project G1652 work_request 17370 SRX002292 12859.WR17273.454-1703.645093081022.P.UNMATCHED 6d26a0df-bf03-4a9f-bd18-412326dc7a70 SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli B093 via random selection SRS005128 454-1703 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGTCCGGTC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-03-05 15:05:24.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25764.3 lsid BROAD:SEQUENCING_SAMPLE:25764.3 material_type Genomic DNA project G1652 work_request 17273 SRX002293 12859.WR17239.454-1468.645113081001.S.UNMATCHED 56f4dc16-ab2f-4ea1-ac40-cb090f6b8d97 SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli B185 via random selection SRS005135 454-1468 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTTGGC 2 forward Application Read Forward 12 454 GS FLX 2009-03-18 19:42:39.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25767.1 lsid BROAD:SEQUENCING_SAMPLE:25767.1 material_type Genomic DNA project G1652 work_request 17239 SRX002294 235197.WR36419.Pond-243866.C25G5ACXX130609.P 1f9f90b5-2c57-43d9-985f-bb95e05b59fe SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of human gut metagenome via random selection SRS414269 10301-ST-11 SAMN01828404 Pond-243866 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 12:59:40.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325355.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN5 material_type DNA:DNA Somatic product_order PDO-1159 product_part_number P-WG-0004 project G36672 research_project RP-342 root_sample_id SM-2ISGI sample_id SM-4CFN5 work_request 36419 SRX002295 256.WR16972.Solexa-5418.30429AAXX080723.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000036 Solexa-5418 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25106.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B6 BI project name G1528 BI work request ID 16972 SRX002296 12859.WR17239.454-1470.645113081001.S.UNMATCHED db049953-40d7-48fb-a6a7-e347ca89b927 SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli E1002 via random selection SRS005134 454-1470 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTCGAC 2 forward Application Read Forward 12 454 GS FLX 2009-03-18 19:42:39.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25783.1 lsid BROAD:SEQUENCING_SAMPLE:25783.1 material_type Genomic DNA project G1652 work_request 17239 SRX002297 2064411.WR36671.Solexa-166667.H0T24ADXX130627.P 938fb1fb-9aa2-46ff-87ca-1ae7580cecad SRP021271 PRJNA198128 TB ARC KRITH Mycobacterium_tuberculosis_TKK_01_0033_ltp_K857_WGS_Monoisolate Illumina sequencing of Mycobacterium Tuberculosis TKK-01-0033 via random selection SRS415200 SAMN02053766 TKK-01-0033 Solexa-166667 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-28 19:57:08.0 N/A GAPipeline RTA1.17.20 Sequencer Application 2.0.5 gssr_id 340239.0 lsid broadinstitute.org:bsp.prod.sample:4GRF9 material_type DNA:DNA Somatic product_order PDO-31 product_part_number P-MCV-0001 project G27582 research_project RP-114 root_sample_id SM-2Z9RS sample_id SM-4GRF9 work_request 36671 SRX002298 12859.WR17239.454-1452.645271080915.S.UNMATCHED 88f59f08-2f97-4aec-93f2-720754da775d SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli B367 via random selection SRS005130 454-1452 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGTCGAC 2 forward Application Read Forward 12 454 GS FLX 2009-03-18 20:08:05.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25770.1 lsid BROAD:SEQUENCING_SAMPLE:25770.1 material_type Genomic DNA project G1652 work_request 17239 SRX002299 12859.WR17274.454-1523.645396081001.S.UNMATCHED e22b4f3a-a167-48d7-9b75-f45376e04fa2 SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli B706 via random selection SRS005112 454-1523 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACACAAC 2 forward Application Read Forward 13 454 GS FLX 2009-03-18 21:45:00.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25774.3 lsid BROAD:SEQUENCING_SAMPLE:25774.3 material_type Genomic DNA project G1652 work_request 17274 SRX002300 256.WR16828.Solexa-5070.304CDAAXX080626.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000103 NA18510 Solexa-5070 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 24675.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWD BI project name G1480 BI work request ID 16828 SRX002301 12859.WR18451.454-2446.646345090206.P.UNMATCHED 73675b83-f784-4692-b1c3-b1680918f174 SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli H593 via random selection SRS005156 454-2446 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGACCTC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-04-09 16:42:56.0 N/A 454BaseCaller 2.0.00.22 gssr_id 29165.2 lsid BROAD:SEQUENCING_SAMPLE:29165.2 material_type Genomic DNA project G1652 work_request 18451 SRX002302 2097113.WR36671.Solexa-166700.H0T24ADXX130627.P e6d70aa6-a546-4aed-b71f-8bb63616b2cb SRP026511 PRJNA200326 TB ARC Belarus Mycobacterium_tuberculosis_minsk0003_ltp_L153_WGS_Monoisolate Illumina sequencing of Mycobacterium tuberculosis minsk0003 via random selection SRS454494 SAMN02058521 4439.2012 Solexa-166700 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-28 19:57:08.0 N/A GAPipeline RTA1.17.20 Sequencer Application 2.0.5 gssr_id 340243.0 lsid broadinstitute.org:bsp.prod.sample:4GRFD material_type DNA:DNA Somatic product_order PDO-1107 product_part_number P-MCV-0001 project G36104 research_project RP-114 root_sample_id SM-3S1OQ sample_id SM-4GRFD work_request 36671 SRX002303 12859.WR18452.454-2449.646345090206.P.UNMATCHED 0f9b3240-09a4-47f0-a292-b526c9d5a90d SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli H605 via random selection SRS005155 454-2449 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGGCGGC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-04-09 16:42:56.0 N/A 454BaseCaller 2.0.00.22 gssr_id 29167.2 lsid BROAD:SEQUENCING_SAMPLE:29167.2 material_type Genomic DNA project G1652 work_request 18452 SRX002304 256.WR16952.Solexa-5398.304TCAAXX080723.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000037 Solexa-5398 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25086.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3AL BI project name G1508 BI work request ID 16952 SRX002305 12859.WR18453.454-2450.646345090206.P.UNMATCHED 3441e8ed-7d91-45bd-ac60-2737f661434f SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli H660 via random selection SRS005154 454-2450 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGACAC 2 forward Application Read Forward 11 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-04-09 16:42:56.0 N/A 454BaseCaller 2.0.00.22 gssr_id 29182.2 lsid BROAD:SEQUENCING_SAMPLE:29182.2 material_type Genomic DNA project G1652 work_request 18453 SRX002306 235197.WR36419.Pond-243865.C25G5ACXX130609.P a4f2d875-44c1-4fa4-839f-d1953f095b75 SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of human gut metagenome via random selection SRS414210 10891-ST-11 SAMN01828367 Pond-243865 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 12:59:40.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325354.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN4 material_type DNA:DNA Somatic product_order PDO-1159 product_part_number P-WG-0004 project G36664 research_project RP-342 root_sample_id SM-2ISF5 sample_id SM-4CFN4 work_request 36419 SRX002307 12859.WR19195.454-1801.646468090522.P.UNMATCHED b8942c99-9ebf-4527-9621-3888676a0166 SRP001131 Escherichia_coli_WGS_Multiisolate PRJNA38063 454 sequencing of Escherichia coli H299 via random selection SRS005148 454-1801 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGGAGGAAC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-05-22 22:18:45.0 N/A 454BaseCaller 2.0.00.22 gssr_id 26700.2 lsid BROAD:SEQUENCING_SAMPLE:26700.2 material_type Genomic DNA project G1652 work_request 19195 SRX002308 82866.WR24424.Pond-53159.B00EBABXX110216.tagged_250.P 2eed90d3-5979-48fc-8e94-24ee4cf2e812 SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN1587 via random selection SRS174169 BROAD:SEQUENCING_SAMPLE:78623.0 Pond-53159 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode ATAGCGTC 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78623.1 lsid BROAD:SEQUENCING_SAMPLE:78623.1 material_type Genomic DNA project G8924 work_request 24424 SRX002309 82866.WR24424.Pond-53158.B00EBABXX110216.tagged_289.P d2f2a5af-a7f9-4fb3-8e18-64b11c54907d SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN499 via random selection SRS174158 BROAD:SEQUENCING_SAMPLE:78615.0 Pond-53158 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode ATTATGTT 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78615.1 lsid BROAD:SEQUENCING_SAMPLE:78615.1 material_type Genomic DNA project G8932 work_request 24424 SRX002310 235197.WR36419.Pond-243863.D26W1ACXX130609.P f66b9c95-4285-4c63-8ab4-bb743d592f8b SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of unclassified Bacteria (miscellaneous) via random selection SRS372649 PRJNA218187.11091_ST_11_1 Pond-243863 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 15:58:55.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325395.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN2 material_type DNA:DNA Genomic product_order PDO-1159 product_part_number P-WG-0004 project G36743 research_project RP-342 root_sample_id SM-2VRXK sample_id SM-4CFN2 work_request 36419 SRX002311 256.WR16828.Solexa-5070.30B0NAAXX080811.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000103 NA18510 Solexa-5070 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 24675.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWD BI project name G1480 BI work request ID 16828 SRX002312 82866.WR24424.Pond-53157.B00EBABXX110216.tagged_332.P 4aaea252-83b0-4e10-83de-4a0f30554c6d SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN1135 via random selection SRS174144 BROAD:SEQUENCING_SAMPLE:78606.0 Pond-53157 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CACATCCT 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78606.1 lsid BROAD:SEQUENCING_SAMPLE:78606.1 material_type Genomic DNA project G8941 work_request 24424 SRX002313 82866.WR24424.Pond-53150.B00EBABXX110216.tagged_357.P 3ad06ad3-4065-4043-b7ef-da72f76cc484 SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN1500 via random selection SRS174165 BROAD:SEQUENCING_SAMPLE:78613.0 Pond-53150 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CAGGAGCC 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78613.1 lsid BROAD:SEQUENCING_SAMPLE:78613.1 material_type Genomic DNA project G8934 work_request 24424 SRX002314 6731.WR33973.Sage-130993.D1K5FACXX130103.P 7e6f3284-a7e6-4ffa-8f07-c64d1fb15995 SRP000542 PRJNA33865 Whole genome sequencing of YRI Yoruba HapMap population Homo_sapiens_low_coverage_lcl_ltp_C79_WGS_Monoisolate Illumina sequencing of Homo sapiens via random selection SRS000107 SAMN00001589 NA18519 GM18519 Sage-130993 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-01-14 17:45:47.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 276576.0 lsid broadinstitute.org:bsp.prod.sample:3R4F7 material_type DNA:DNA Genomic project G27733 root_sample_id SM-MCUZ sample_id SM-3R4F7 work_request 33973 SRX002315 82866.WR24424.Pond-53146.B00EBABXX110216.tagged_367.P 04c79689-2536-4aee-8f34-27c0a1fd6a21 SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN1744 via random selection SRS174159 BROAD:SEQUENCING_SAMPLE:78612.0 Pond-53146 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CATAGCGA 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78612.1 lsid BROAD:SEQUENCING_SAMPLE:78612.1 material_type Genomic DNA project G8935 work_request 24424 SRX002316 82866.WR24424.Pond-53139.B00EBABXX110216.tagged_375.P f674cfe9-f90f-4a79-b914-456b1b9cd8d8 SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN4112 via random selection SRS174154 BROAD:SEQUENCING_SAMPLE:78595.0 Pond-53139 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CATGCTTA 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78595.1 lsid BROAD:SEQUENCING_SAMPLE:78595.1 material_type Genomic DNA project G8952 work_request 24424 SRX002317 82866.WR24424.Pond-53160.B00EBABXX110216.tagged_393.P 9c7c391e-b1fc-4674-bfb6-a4609fb2511e SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN2206 via random selection SRS174149 BROAD:SEQUENCING_SAMPLE:78599.0 Pond-53160 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CCAGTTAG 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78599.1 lsid BROAD:SEQUENCING_SAMPLE:78599.1 material_type Genomic DNA project G8948 work_request 24424 SRX002318 256.WR17561.Solexa-5071.30D78AAXX080929.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000141 NA18853 Solexa-5071 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR sample ID 24676.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWE BI project name G1481 BI work request ID 17561 SRX002319 82866.WR24424.Pond-53162.B00EBABXX110216.tagged_422.P 02431878-1eec-46b6-a09d-4c531831524e SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN268 via random selection SRS174157 BROAD:SEQUENCING_SAMPLE:78616.0 Pond-53162 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CCTACCAT 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78616.1 lsid BROAD:SEQUENCING_SAMPLE:78616.1 material_type Genomic DNA project G8931 work_request 24424 SRX002320 82866.WR24424.Pond-53151.B00EBABXX110216.tagged_426.P 77392056-2871-49f2-826c-90d47536211f SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN434 via random selection SRS174143 BROAD:SEQUENCING_SAMPLE:78621.0 Pond-53151 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CCTATGCC 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78621.1 lsid BROAD:SEQUENCING_SAMPLE:78621.1 material_type Genomic DNA project G8926 work_request 24424 SRX002321 82866.WR24424.Pond-53134.B00EBABXX110216.tagged_504.P e3776de6-cdea-4cb2-a8cc-695d99553558 SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN2953 via random selection SRS174147 BROAD:SEQUENCING_SAMPLE:78594.0 Pond-53134 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CTACCAGG 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78594.1 lsid BROAD:SEQUENCING_SAMPLE:78594.1 material_type Genomic DNA project G8953 work_request 24424 SRX002322 6731.WR33973.Sage-130993.C1EHJACXX130116.P 7d72deb1-29c4-46b5-b329-7fde822f8d8d SRP000542 PRJNA33865 Whole genome sequencing of YRI Yoruba HapMap population Homo_sapiens_low_coverage_lcl_ltp_C79_WGS_Monoisolate Illumina sequencing of Homo sapiens via random selection SRS000107 SAMN00001589 NA18519 GM18519 Sage-130993 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-01-27 12:46:38.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 276576.0 lsid broadinstitute.org:bsp.prod.sample:3R4F7 material_type DNA:DNA Genomic project G27733 root_sample_id SM-MCUZ sample_id SM-3R4F7 work_request 33973 SRX002323 256.WR17563.Solexa-5418.30D78AAXX080929.P SRP000031 1000Genomes Project Pilot 1 WGSWithRef Sequence 2 lanes on Illumina SRS000036 Solexa-5418 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR sample ID 25106.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B6 BI project name G1528 BI work request ID 17563 SRX002324 82866.WR24424.Pond-53137.B00EBABXX110216.tagged_564.P 52e59afa-b3af-4d80-93d7-b6cd067db05d SRP003679 PRJNA49647 Mycobacterium tuberculosis PGG1 project ltp_E7G_WGS_Multiisolate Illumina sequencing of Mycobacterium tuberculosis HN198 via random selection SRS174150 BROAD:SEQUENCING_SAMPLE:78618.0 Pond-53137 WGS GENOMIC RANDOM 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode GAAGAAGT 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-02-23 22:53:17.0 N/A GAPipeline RTA 1.7.48.1 Sequencer Application 1.1.37.19 gssr_id 78618.1 lsid BROAD:SEQUENCING_SAMPLE:78618.1 material_type Genomic DNA project G8929 work_request 24424 SRX002991 256.WR16833.Solexa-5075.304NLAAXX080724.P-Forward SRP000031 1000Genomes Project Pilot 1 1000 genomes low coverage on Illumina SRS000149 NA18912 Solexa-5075 WGS GENOMIC RANDOM 76 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR Sample ID 24680.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWI BI Project Name G1485 BI Work Request ID 16833 SRX002992 256.WR16833.Solexa-5075.304NLAAXX080729.P-Reverse SRP000031 1000Genomes Project Pilot 1 1000 genomes low coverage on Illumina SRS000149 NA18912 Solexa-5075 WGS GENOMIC RANDOM 76 0 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR sample ID 24680.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWI BI project name G1485 BI work request ID 16833 SRX002993 22780.WR17649.454-1939.632377081125.P.UNMATCHED 2658f9e1-9b9f-47d5-bfae-958b3626d859 SRP001636 Reference Genome for Human Microbiome Project Pediococcus_acidilactici_7_4_ltp_HMPREF9024_WGS_Monoisolate PRJNA40051 15x fragment; 30x physical paired SRS002792 454-1939 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACTCGAAC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-02-17 15:25:21.0 N/A 454BaseCaller 2.0.00.17 gssr_id 16683.2 lsid BROAD:SEQUENCING_SAMPLE:16683.2 material_type Genomic DNA project G1758 work_request 17649 SRX002994 12038.WR18248.454-2422.636092090304.P.UNMATCHED 8a2abe47-8fd4-4e82-bbf2-e3c6e5f66487 SRP001081 Paralabidochromis chilotes genome sequencing project Haplochromis_Lake_Victoria_ltp_CEO_WGS_Monoisolate PRJNA38005 454 sequencing of Haplochromis chilotes SRS004738 454-2422 CLONE GENOMIC other 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTGTCGAAC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-04-09 16:11:08.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 30566.1 lsid BROAD:SEQUENCING_SAMPLE:30566.1 material_type Genomic DNA project L36079 work_request 18248 SRX002995 215371.WR24805.Solexa-59046.B068MABXX110309.tagged_880.P 55acea92-65fc-4a16-b12e-c9166c4cbc5b SRP006302 PRJNA64917 Reference genome for the Human Microbiome Project Treponema_denticola_MYR_T_ltp_HMPREF9727_WGS_Monoisolate low coverage of genome on Illumina SRS184242 PRJNA28331.Treponema denticola Solexa-59046 WGS GENOMIC RANDOM 210 0 forward Application Read Forward 1 1 barcode Technical Read BarCode TCTGGCGA 2 reverse Application Read Reverse 110 Illumina HiSeq 2000 2011-03-28 19:57:26.0 N/A GAPipeline RTA1.10.36 Sequencer Application 1.3.8 gssr_id 65744.2 lsid BROAD:SEQUENCING_SAMPLE:65744.2 material_type Genomic DNA project G10812 work_request 24805 SRX002996 22821.WR20544.454-2827.722492100111.S.UNMATCHED 9cf608e4-16ef-42c9-ac79-93fa156776c0 SRP001658 Reference genome for Human Microbiome Project Erysipelotrichaceae_bacterium_2_2_44A_ltp_HMPREF9022_WGS_Monoisolate PRJNA41983 15x fragment; 30x physical paired SRS002826 454-2827 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAGGAATC 2 forward Application Read Forward 13 454 GS FLX Titanium 2010-01-12 22:17:49.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Assembly gssr_id 16675.1 lsid BROAD:SEQUENCING_SAMPLE:16675.1 material_type Genomic DNA project G2112 work_request 20544 SRX002997 176045.WR24662.454-6888.744167110209.Kiev.S 49f6edc6-4990-46f6-b219-8e5f4bbdd2d6 SRP005893 PRJNA49883 Reference genome for the Human Microbiome Project Prevotella_histicola_F0411_ltp_HMPREF9138_WGS_Monoisolate low coverage of genome on 454 SRS173225 PRJNA28331.Prevotella histicola F0411 454-6888 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGAATAC 2 forward Application Read Forward 14 454 GS FLX Titanium 2011-04-13 13:35:49.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 57718.1 lsid BROAD:SEQUENCING_SAMPLE:57718.1 material_type Genomic DNA project G10707 work_request 24662 SRX002998 1465360.WR35091.Pond-220578.C1MYYACXX130224.P 0c798a52-20be-46c0-b08f-0e455b7cc300 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350686 SAMN01090796 HG03066 Pond-220578 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:39:56.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288711.0 lsid broadinstitute.org:bsp.prod.sample:3VECJ material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YR sample_id SM-3VECJ target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX002999 20238.WR24484.454-5477.744170101222.Kiev.P 3dabb082-f48e-4d26-a6d2-ca4406d464a6 SRP002074 PRJNA41279 Puccinia_striiformis_2K041_Yr9_ltp_CQM_WGS_Monoisolate 454 sequencing of Puccinia striiformis 2K041-Yr9 via random selection SRS085078 PRJNA41279.pooled gDNA sample 454-5477 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGAATAC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2011-01-04 14:24:34.0 N/A 454BaseCaller 2.3 analysis_type Standard 454 Base Calling and Alignment gssr_id 57819.4 lsid BROAD:SEQUENCING_SAMPLE:57819.4 material_type Genomic DNA project G2495 work_request 24484 SRX003000 176045.WR24663.454-6918.744684110211.Colombo.P 9629a892-8feb-4be6-8ced-23575bd490d9 SRP005893 PRJNA49883 Reference genome for the Human Microbiome Project Prevotella_histicola_F0411_ltp_HMPREF9138_WGS_Monoisolate low coverage of genome on 454 SRS173225 PRJNA28331.Prevotella histicola F0411 454-6918 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGTAATC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2011-04-13 13:51:48.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 57718.2 lsid BROAD:SEQUENCING_SAMPLE:57718.2 material_type Genomic DNA project G10707 work_request 24663 SRX003001 169720.WR22235.454-4977.731996100714.Kingston.S 65dcc558-a76e-4748-ac58-9a9f7b339cb4 SRP006085 PRJNA61265 Mycobacterium tuberculosis str Erdman WHO genome sequencing ltp_EYI_WGS_Monoisolate 454 fragment coverage SRS179087 PRJNA61265.Erdman_WHO 454-4977 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGCCGAAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2010-07-29 14:35:57.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 54057.1 lsid BROAD:SEQUENCING_SAMPLE:54057.1 material_type Genomic DNA project G4729 work_request 22235 SRX003002 1465360.WR35091.Pond-220575.D1RYEACXX130302.P 837ecd38-35ba-48fc-b04a-4b258a3fc016 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350693 SAMN01090803 HG03437 Pond-220575 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288708.0 lsid broadinstitute.org:bsp.prod.sample:3VECG material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YO sample_id SM-3VECG target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003007 256.WR16974.Solexa-5420.304MUAAXX080802.P-Reverse SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000054 Solexa-5420 WGS GENOMIC RANDOM 51 0 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25108.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B8 BI project name G1530 BI work request ID 16974 SRX003008 11019.WR17558.454-1764.642285081107.P.UNMATCHED 679132cc-691b-4ff7-bed3-788ab6e7a18a SRP001083 WGS sequencing Gaeumannomyces_graminis_var_tritici_R3_111a_1_ltp_GGTG_Monoisolate PRJNA37931 454 sequencing of Gaeumannomyces graminis var. tritici via random selection SRS004744 454-1764 WGS GENOMIC RANDOM 3kb Paired Library 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCACCTTC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-02-23 16:05:44.0 N/A 454BaseCaller 2.0.00.17 gssr_id 26157.3 lsid BROAD:SEQUENCING_SAMPLE:26157.3 material_type Genomic DNA project G1676 work_request 17558 SRX003009 9626.WR17607.454-1807.642285081107.P.UNMATCHED 849a029e-c793-4bd7-9d0c-113b96d81cc5 SRP000963 WGS sequencing Glomerella_graminicola_M1001_ltp_GLRG_Monoisolate PRJNA37879 454 sequencing of Colletotrichum graminicola M1.001 via random selection SRS004186 454-1807 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGTAATC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-02-23 16:05:44.0 N/A 454BaseCaller 2.0.00.17 gssr_id 14028.8 lsid BROAD:SEQUENCING_SAMPLE:14028.8 material_type Genomic DNA project G1040 sample_type mycelium work_request 17607 SRX003010 9626.WR17607.454-1807.642285081118.P.UNMATCHED 886fa79d-3afa-47b9-b45e-615466c97d31 SRP000963 WGS sequencing Glomerella_graminicola_M1001_ltp_GLRG_Monoisolate PRJNA37879 454 sequencing of Colletotrichum graminicola M1.001 via random selection SRS004186 454-1807 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGTAATC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-03-06 13:34:16.0 N/A 454BaseCaller 2.0.00.17 gssr_id 14028.8 lsid BROAD:SEQUENCING_SAMPLE:14028.8 material_type Genomic DNA project G1040 sample_type mycelium work_request 17607 SRX003011 1465360.WR35091.Pond-220575.C1NKEACXX130223.P 9ac05b0f-b769-40a6-a2b7-7d3be74a188e SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350693 SAMN01090803 HG03437 Pond-220575 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 16:52:49.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288708.0 lsid broadinstitute.org:bsp.prod.sample:3VECG material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YO sample_id SM-3VECG target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003012 22787.WR17615.454-1823.642285081118.S.UNMATCHED 2616c7fb-306a-434d-a320-234cf50bd22b SRP001617 Reference genome for Human Microbiome Project Burkholderiales_bacterium_1_1_47_ltp_HMPREF0189_WGS_Monoisolate PRJNA41965 15x fragment; 30x physical paired SRS002790 454-1823 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTGGAGGC 2 forward Application Read Forward 13 454 GS FLX 2009-03-06 13:34:16.0 N/A 454BaseCaller 2.0.00.17 analysis_type Bacterial 454 Assembly gssr_id 17326.1 lsid BROAD:SEQUENCING_SAMPLE:17326.1 material_type Genomic DNA project G1738 work_request 17615 SRX003013 7264.WR17282.454-1448.642311080923.S.UNMATCHED a5f8813b-9c60-467f-a868-20981a83793a SRP000750 Staphylococcus aureus WGS_Multiisolate PRJNA37747 10X fragment coverage SRS002874 454-1448 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACTGTTC 2 forward Application Read Forward 13 454 GS FLX 2009-02-23 15:00:53.0 N/A 454BaseCaller 2.0.00.17 gssr_id 21976.2 lsid BROAD:SEQUENCING_SAMPLE:21976.2 material_type Genomic DNA project G1677 work_request 17282 SRX003015 256.WR16970.Solexa-5416.3040TAAXX080624.P-Forward SRP000031 1000Genomes Project Pilot 1 1000 Genomes Pilot 1 (aka pilot 1A) SRS000035 Solexa-5416 WGS GENOMIC RANDOM 51 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR sample ID 25104.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B4 BI project name G1526 BI work request ID 16970 SRX003016 7264.WR17290.454-1469.642311080923.S.UNMATCHED 8d4af0ac-7f3a-495b-83f7-abfe53ee898c SRP000750 Staphylococcus aureus WGS_Multiisolate PRJNA37747 10X fragment coverage SRS002901 454-1469 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGCGTTC 2 forward Application Read Forward 12 454 GS FLX 2009-02-23 15:00:53.0 N/A 454BaseCaller 2.0.00.17 gssr_id 21980.2 lsid BROAD:SEQUENCING_SAMPLE:21980.2 material_type Genomic DNA project G1677 work_request 17290 SRX003017 22811.WR16986.454-1294.642553080709.S.UNMATCHED 5e4ab6cf-b8a6-4f23-9555-b0e9d9e36553 SRP001613 This strain will be used for comparative genome analysis Fusobacterium_gonidiaformans_ATCC_25563_ltp_FGAG_WGS_Monoisolate PRJNA32419 15x fragment; 30x physical paired SRS002787 454-1294 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AAGGCCTC 2 forward Application Read Forward 13 454 GS FLX 2008-07-09 22:10:03.0 N/A 454BaseCaller 1.1.03.24 gssr_id 17335.2 lsid BROAD:SEQUENCING_SAMPLE:17335.2 material_type Genomic DNA project G1537 work_request 16986 SRX003018 1465360.WR35091.Pond-220575.C1MYYACXX130224.P 826f9353-f5d8-4b27-b2b7-4f12f24f9374 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350693 SAMN01090803 HG03437 Pond-220575 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:39:56.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288708.0 lsid broadinstitute.org:bsp.prod.sample:3VECG material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YO sample_id SM-3VECG target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003019 1465360.WR35091.Pond-220569.D1RYEACXX130302.P 17e9a608-1c54-4997-88fe-9e7c7a6e38d4 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350704 SAMN01090814 HG03547 Pond-220569 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288703.0 lsid broadinstitute.org:bsp.prod.sample:3VECA material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YI sample_id SM-3VECA target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003020 7263.WR17469.454-1644.642583081010.S.UNMATCHED a9a642c0-3352-4bd0-b87b-4f10d9196631 SRP000757 Staphylococcus aureus comparative genomics project ltp_C91_WGS_Multiisolate PRJNA36321 Shear and sequence on 454 SRS003272 454-1644 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTGTGTTC 2 forward Application Read Forward 13 454 GS FLX 2009-03-05 16:12:35.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25820.1 lsid BROAD:SEQUENCING_SAMPLE:25820.1 material_type Genomic DNA project G1731 work_request 17469 SRX003021 7263.WR17465.454-1646.642583081010.S.UNMATCHED 799731a9-6354-4e9e-af5d-10c9b6ece467 SRP000757 Staphylococcus aureus comparative genomics project ltp_C91_WGS_Multiisolate PRJNA36321 Shear and sequence on 454 SRS003268 454-1646 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCACGGTC 2 forward Application Read Forward 13 454 GS FLX 2009-03-05 16:12:35.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25809.1 lsid BROAD:SEQUENCING_SAMPLE:25809.1 material_type Genomic DNA project G1731 work_request 17465 SRX003023 256.WR17562.Solexa-5080.30D74AAXX080928.P SRP000031 1000Genomes Project Pilot 1 WGSWithRef Sequence 3 lanes on Illumina SRS000146 NA18871 Solexa-5080 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR sample ID 24685.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWN BI project name G1490 BI work request ID 17562 SRX003024 3344.WR16908.454-1363.642700080812.S.UNMATCHED 3e785deb-4a97-4ceb-839c-5cac3bdcc7ef SRP000348 Erythromycin tetracycline resistant strain Enterococcus_faecalis_DS5_ltp_EFEG_WGS_Monoisolate PRJNA32925 We propose to use a mix of 10X coverage from a standard fragment library and 10X coverage from a jumping library on 454. SRS001079 454-1363 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACTCCTC 2 forward Application Read Forward 12 454 GS FLX 2008-08-12 23:40:47.0 N/A 454BaseCaller 1.1.03.24 gssr_id 12528.1 lsid BROAD:SEQUENCING_SAMPLE:12528.1 material_type Genomic DNA project G1206 work_request 16908 SRX003025 7264.WR17283.454-1450.642700080909.S.UNMATCHED 91d1315d-37f5-43ad-b5e2-5c6759af6321 SRP000750 Staphylococcus aureus WGS_Multiisolate PRJNA37747 10X fragment coverage SRS002899 454-1450 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CTTCCTTC 2 forward Application Read Forward 13 454 GS FLX 2009-03-04 11:32:54.0 N/A 454BaseCaller 2.0.00.17 gssr_id 21984.2 lsid BROAD:SEQUENCING_SAMPLE:21984.2 material_type Genomic DNA project G1677 work_request 17283 SRX003026 7263.WR17468.454-1643.642700081009.S.UNMATCHED e9a1e9ab-16fc-4b53-a48b-ce6e1ea1aa19 SRP000757 Staphylococcus aureus comparative genomics project ltp_C91_WGS_Multiisolate PRJNA36321 Shear and sequence on 454 SRS003271 454-1643 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCGTTGTC 2 forward Application Read Forward 13 454 GS FLX 2009-03-05 16:30:20.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25818.1 lsid BROAD:SEQUENCING_SAMPLE:25818.1 material_type Genomic DNA project G1731 work_request 17468 SRX003027 9626.WR17485.454-1645.642700081009.S.UNMATCHED d7e7841b-ff98-44a3-985c-ae44242b4b3f SRP000963 WGS sequencing Glomerella_graminicola_M1001_ltp_GLRG_Monoisolate PRJNA37879 454 sequencing of Colletotrichum graminicola M1.001 via random selection SRS004186 454-1645 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGGTGAAC 2 forward Application Read Forward 13 454 GS FLX 2009-03-05 16:30:20.0 N/A 454BaseCaller 2.0.00.17 gssr_id 14028.6 lsid BROAD:SEQUENCING_SAMPLE:14028.6 material_type Genomic DNA project G1040 sample_type mycelium work_request 17485 SRX003028 1465360.WR35091.Pond-220569.C1NKEACXX130223.P 530ed320-e0a0-4180-8abb-4b2b0f8d5b32 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350704 SAMN01090814 HG03547 Pond-220569 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 16:52:49.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288703.0 lsid broadinstitute.org:bsp.prod.sample:3VECA material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YI sample_id SM-3VECA target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003029 256.WR16969.Solexa-5415.303H6AAXX080630.P-Forward SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000049 Solexa-5415 WGS GENOMIC RANDOM 51 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR Sample ID 25103.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B3 BI Project Name G1525 BI Work Request ID 16969 SRX003030 256.WR16969.Solexa-5415.303H6AAXX080703.P-Reverse SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000049 Solexa-5415 WGS GENOMIC RANDOM 51 0 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25103.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B3 BI project name G1525 BI work request ID 16969 SRX003031 3415.WR16907.454-1361.642735080814.S.UNMATCHED b157f866-2c58-42b6-97f3-bcd56df4456a SRP000356 Isolated from pig Enterococcus_faecalis_D6_ltp_EFLG_WGS_Monoisolate PRJNA32947 We propose to use a mix of 10X coverage from a standard fragment library and 10X coverage from a jumping library on 454. SRS001104 454-1361 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTCGAC 2 forward Application Read Forward 12 454 GS FLX 2008-08-15 15:12:37.0 N/A 454BaseCaller 1.1.03.24 gssr_id 12519.2 lsid BROAD:SEQUENCING_SAMPLE:12519.2 material_type Genomic DNA project G1205 work_request 16907 SRX003032 1465360.WR35091.Pond-220569.C1MYYACXX130224.P 3999b8c4-0ee6-415a-8fe8-86790fad0850 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350704 SAMN01090814 HG03547 Pond-220569 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:39:56.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288703.0 lsid broadinstitute.org:bsp.prod.sample:3VECA material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YI sample_id SM-3VECA target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003033 7263.WR17528.454-1688.642735081023.S.UNMATCHED 3778c151-4a26-4a7b-bd2d-315b6a3ac317 SRP000757 Staphylococcus aureus comparative genomics project ltp_C91_WGS_Multiisolate PRJNA36321 Shear and sequence on 454 SRS003270 454-1688 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGTCGAC 2 forward Application Read Forward 12 454 GS FLX 2009-03-05 14:41:38.0 N/A 454BaseCaller 2.0.00.17 gssr_id 27493.2 lsid BROAD:SEQUENCING_SAMPLE:27493.2 material_type Genomic DNA project G1731 work_request 17528 SRX003034 1465360.WR35091.Pond-220567.D1RYEACXX130302.P e3216154-2359-47f7-bff0-c52f9560098f SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350724 SAMN01090834 HG03583 Pond-220567 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288701.0 lsid broadinstitute.org:bsp.prod.sample:3VEC8 material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YG sample_id SM-3VEC8 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003035 6727.WR19105.454-2822.644133090422.P.UNMATCHED 48baa6f5-4a51-4eb0-b3cf-5e3f78c88fb7 SRP001074 Reference genome for the Human Microbiome Project Leptotrichia_goodfellowii_D28_ltp_HMPREF9014_WGS_Monoisolate PRJNA38775 15x fragment; 30x physical paired SRS004700 454-2822 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACACCGGTC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-04-23 03:25:38.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 28887.2 lsid BROAD:SEQUENCING_SAMPLE:28887.2 material_type Genomic DNA project G2113 work_request 19105 SRX003036 3295.WR16900.454-1321.644905080722.S.UNMATCHED 2bf4fcd4-5c0a-4210-aa6c-1cd861269e14 SRP000343 Isolated from urine Enterococcus_faecalis_T3_ltp_EFCG_WGS_Monoisolate PRJNA32919 We propose to use a mix of 10X coverage from a standard fragment library and 10X coverage from a jumping library on 454. SRS001065 454-1321 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCGTTGTC 2 forward Application Read Forward 13 454 GS FLX 2009-09-16 14:08:02.0 N/A 454BaseCaller 1.1.03.24 gssr_id 12524.2 lsid BROAD:SEQUENCING_SAMPLE:12524.2 material_type Genomic DNA project G1197 work_request 16900 SRX003037 22824.WR16978.454-1288.645011080728.S.UNMATCHED 9f5bf073-2c81-424f-8918-4f1d16409573 SRP001625 Reference genome for the Human Microbiome Project Bacteroides_fragilis_3_1_12_ltp_BFAG_WGS_Monoisolate PRJNA32433 15X fragment; 30X physical paired SRS002788 454-1288 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCGGTCGC 2 forward Application Read Forward 13 454 GS FLX 2008-07-29 00:24:48.0 N/A 454BaseCaller 1.1.03.24 gssr_id 16656.2 lsid BROAD:SEQUENCING_SAMPLE:16656.2 material_type Genomic DNA project G1533 work_request 16978 SRX003038 1465360.WR35091.Pond-220567.C1NKEACXX130223.P 71453801-983b-4a8f-9aad-66801dfa523e SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350724 SAMN01090834 HG03583 Pond-220567 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 16:52:49.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288701.0 lsid broadinstitute.org:bsp.prod.sample:3VEC8 material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YG sample_id SM-3VEC8 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003039 3381.WR16770.454-1224.645069080701.S.UNMATCHED 7ae66949-0dbe-41eb-85fb-713ec4f1117f SRP000353 Fecal isolate Enterococcus_faecalis_E1Sol_ltp_EFJG_WGS_Monoisolate PRJNA32941 We propose to use a mix of 15X sequence coverage from a standard fragment library and 30X physical coverage from a jumping library on 454. SRS001094 454-1224 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTTGGC 2 forward Application Read Forward 12 454 GS FLX 2008-08-13 14:12:24.0 N/A 454BaseCaller 1.1.03.24 gssr_id 12526.3 lsid BROAD:SEQUENCING_SAMPLE:12526.3 material_type Genomic DNA project G1180 work_request 16770 SRX003040 1465360.WR35091.Pond-220567.C1MYYACXX130224.P 1eb313ee-905c-482f-9e0d-66e52be4efbc SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350724 SAMN01090834 HG03583 Pond-220567 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:39:56.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288701.0 lsid broadinstitute.org:bsp.prod.sample:3VEC8 material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YG sample_id SM-3VEC8 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003041 22796.WR16987.454-1302.645088080715.S.UNMATCHED 01daffdc-f388-4b5e-adfd-59e5e867f643 SRP001614 Reference genome for the Human Microbiome Project Fusobacterium_gonidiaformans_3_1_5R_3_1_5R_ltp_FSBG_WGS_Monoisolate PRJNA32477 15x fragment; 30x physical paired SRS002783 454-1302 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGGTTGTC 2 forward Application Read Forward 13 454 GS FLX 2009-03-18 19:20:57.0 N/A 454BaseCaller 2.0.00.17 gssr_id 17344.2 lsid BROAD:SEQUENCING_SAMPLE:17344.2 material_type Genomic DNA project G1538 work_request 16987 SRX003042 22798.WR16988.454-1304.645088080715.S.UNMATCHED b21e2c36-b9a2-4048-918b-3db608d0b22e SRP001618 Reference genome for the Human Microbiome Project Fusobacterium_nucleatum_subsp_vincentii_4_1_13_ltp_FSCG_WGS_Monoisolate PRJNA32479 15x fragment; 30x physical paired SRS002789 454-1304 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGGTGAAC 2 forward Application Read Forward 13 454 GS FLX 2009-03-18 19:20:57.0 N/A 454BaseCaller 2.0.00.17 gssr_id 17345.2 lsid BROAD:SEQUENCING_SAMPLE:17345.2 material_type Genomic DNA project G1539 work_request 16988 SRX003043 256.WR16821.Solexa-5063.3044NAAXX080616.S SRP000031 1000Genomes Project Pilot 1 1000 Genome (pilot 1) fragment and paired sequencing using Illumina SRS000094 NA18489 Solexa-5063 WGS GENOMIC RANDOM 51 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR Sample ID 24668.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW6 BI Project Name G1473 BI Work Request ID 16821 SRX003044 3353.WR16903.454-1327.645093080728.S.UNMATCHED 77b6b523-7f2f-4de7-9d0f-bbbfccbd74f7 SRP000350 Multidrug resistant isolate from liver Enterococcus_faecalis_CH188_ltp_EFNG_WGS_Monoisolate PRJNA32951 We propose to use a mix of 10X coverage from a standard fragment library and 10X coverage from a jumping library on 454. SRS001083 454-1327 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCTCAAC 2 forward Application Read Forward 13 454 GS FLX 2009-03-18 19:35:46.0 N/A 454BaseCaller 2.0.00.17 gssr_id 12516.1 lsid BROAD:SEQUENCING_SAMPLE:12516.1 material_type Genomic DNA project G1201 work_request 16903 SRX003045 12860.WR17331.454-1698.645093081022.P.UNMATCHED 635ac751-d4cc-416f-88b7-8dd7d7899dba SRP001136 Escherichia_albertii_WGS_Multiisolate PRJNA38065 454 sequencing of Escherichia albertii B090 via random selection SRS005067 454-1698 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CAACCGTTC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-03-05 15:05:24.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25762.3 lsid BROAD:SEQUENCING_SAMPLE:25762.3 material_type Genomic DNA project G1653 work_request 17331 SRX003046 22804.WR20550.454-3589.722492100111.S.UNMATCHED 07ef3036-0c3b-4623-b1a4-613aba8a2e45 SRP001639 Reference genome for Human Microbiome Project Bifidobacterium_sp_12_1_47BFAA_ltp_HMPREF0177_WGS_Monoisolate PRJNA41959 15x fragment; 30x physical paired SRS002811 454-3589 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCAGGTTC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-01-12 22:17:49.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 17325.2 lsid BROAD:SEQUENCING_SAMPLE:17325.2 material_type Genomic DNA project G1748 work_request 20550 SRX003047 7263.WR17466.454-1701.645093081022.P.UNMATCHED 5db10bb1-d1cd-4a97-b5c7-379362954ebf SRP000757 Staphylococcus aureus comparative genomics project ltp_C91_WGS_Multiisolate PRJNA36321 Shear and sequence on 454 SRS003268 454-1701 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCGCGGC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-03-05 15:05:24.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25809.2 lsid BROAD:SEQUENCING_SAMPLE:25809.2 material_type Genomic DNA project G1731 work_request 17466 SRX003048 3534.WR16897.454-1295.645185080711.S.UNMATCHED b0b2d190-2741-4169-8542-016f6fd345be SRP000368 Strain for comparative analysis Enterococcus_faecium_Com12_ltp_EFVG_WGS_Monoisolate PRJNA32965 We propose to use a mix of 10X coverage from a standard fragment library and 10X coverage from a jumping library on 454. SRS001141 454-1295 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGACCGTC 2 forward Application Read Forward 13 454 GS FLX 2008-08-13 14:14:05.0 N/A 454BaseCaller 1.1.03.24 gssr_id 13768.1 lsid BROAD:SEQUENCING_SAMPLE:13768.1 material_type Genomic DNA project G1194 work_request 16897 SRX003049 1465360.WR35091.Pond-220566.D1RYEACXX130302.P c45dced6-2efe-4cbf-93b4-5af68b2b0a8f SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350699 SAMN01090809 HG03476 Pond-220566 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288700.0 lsid broadinstitute.org:bsp.prod.sample:3VEC7 material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YE sample_id SM-3VEC7 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003050 256.WR16953.Solexa-5399.30412AAXX080630.P-Forward SRP000031 1000Genomes Project Pilot 1 1000 genomes low coverage on Illumina SRS000164 NA18960 Solexa-5399 WGS GENOMIC RANDOM 51 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR Sample ID 25087.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AM BI Project Name G1509 BI Work Request ID 16953 SRX003051 256.WR16953.Solexa-5399.30412AAXX080703.P-Reverse SRP000031 1000Genomes Project Pilot 1 1000 genomes low coverage on Illumina SRS000164 NA18960 Solexa-5399 WGS GENOMIC RANDOM 51 0 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25087.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3AM BI project name G1509 BI work request ID 16953 SRX003052 256.WR16822.Solexa-5064.30B7JAAXX080731.S SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000187 NA19116 Solexa-5064 WGS GENOMIC RANDOM 101 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR sample ID 24669.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBW7 BI project name G1474 BI work request ID 16822 SRX003053 3560.WR17187.454-1383.645271080915.S.UNMATCHED 1443cd37-e83a-41cc-8f4e-b7dfedc8ba36 SRP001126 An ampicillin susceptible phoenotype Enterococcus_faecium_D344SRF_ltp_EDAG_WGS_Monoisolate PRJNA32079 Shear and Sequence on 454 SRS004976 454-1383 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCCAAGTC 2 forward Application Read Forward 13 454 GS FLX 2009-03-18 20:08:05.0 N/A 454BaseCaller 2.0.00.17 gssr_id 25510.1 lsid BROAD:SEQUENCING_SAMPLE:25510.1 material_type Genomic DNA project G1630 work_request 17187 SRX003054 2670.WR16806.454-1254.645324080708.S.UNMATCHED 9b49fd94-3290-4871-b5a7-1da42a6b6b51 SRP000277 Penicillin resistant strain Neisseria_gonorrhoeae_FA6140_ltp_NGDG_WGS_Monoisolate PRJNA32791 10X sequence coverage from a standard library and 10X physical coverage from a jumping library on 454. SRS000888 454-1254 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAGGAATC 2 forward Application Read Forward 13 454 GS FLX 2008-07-09 00:13:56.0 N/A 454BaseCaller 1.1.03.24 gssr_id 21405.1 lsid BROAD:SEQUENCING_SAMPLE:21405.1 material_type Genomic DNA project G1470 work_request 16806 SRX003055 1465360.WR35091.Pond-220566.C1NKEACXX130223.P 8188ad0a-56d8-44f1-8fc4-4e28c481e8c7 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350699 SAMN01090809 HG03476 Pond-220566 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 16:52:49.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288700.0 lsid broadinstitute.org:bsp.prod.sample:3VEC7 material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YE sample_id SM-3VEC7 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003056 1465360.WR35091.Pond-220566.C1MYYACXX130224.P 7ba0b1a1-8677-4f71-a149-5fb90874637a SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350699 SAMN01090809 HG03476 Pond-220566 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:39:56.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288700.0 lsid broadinstitute.org:bsp.prod.sample:3VEC7 material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YE sample_id SM-3VEC7 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX003057 22814.WR16984.454-1291.645324080708.S.UNMATCHED 250460ec-5e1b-43dd-9baa-cda703c97236 SRP001622 Reference genome for the Human Microbiome Project Escherichia_sp_3_2_53FAA_ltp_ESAG_WGS_Monoisolate PRJNA32465 15x fragment; 30x physical paired SRS002786 454-1291 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AAGAGTTC 2 forward Application Read Forward 13 454 GS FLX 2008-07-09 00:13:56.0 N/A 454BaseCaller 1.1.03.24 gssr_id 17333.2 lsid BROAD:SEQUENCING_SAMPLE:17333.2 material_type Genomic DNA project G1536 work_request 16984 SRX003058 2598.WR16799.454-1287.645377080709.S.UNMATCHED 10a2a2ec-5663-4b8b-acd3-d01acbee956e SRP000262 Clinical isolate Neisseria_gonorrhoeae_PID1_ltp_NGHG_WGS_Monoisolate PRJNA32799 10X sequence coverage from a standard library and 10X physical coverage from a jumping library on 454. SRS000863 454-1287 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCGCGAC 2 forward Application Read Forward 13 454 GS FLX 2008-08-13 15:42:25.0 N/A 454BaseCaller 1.1.03.24 gssr_id 20107.1 lsid BROAD:SEQUENCING_SAMPLE:20107.1 material_type Genomic DNA project G1463 work_request 16799 SRX003059 256.WR16826.Solexa-5068.30497AAXX080729.P SRP000031 1000Genomes Project Pilot 1 1000 genomes low coverage on Illumina SRS000181 NA19093 Solexa-5068 WGS GENOMIC RANDOM 102 0 forward Application Read Forward 1 1 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 24673.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWB BI project name G1478 BI work request ID 16826 SRX003060 3505.WR16895.454-1289.645377080709.S.UNMATCHED d2ccb31c-e157-47fe-a4a8-bffe59b9e05a SRP000365 Strain for comparative analysis Enterococcus_faecium_1141733_ltp_EFSG_WGS_Monoisolate PRJNA32959 We propose to use a mix of 10X coverage from a standard fragment library and 10X coverage from a jumping library on 454. SRS001130 454-1289 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCTGAAC 2 forward Application Read Forward 13 454 GS FLX 2008-08-13 15:42:25.0 N/A 454BaseCaller 1.1.03.24 gssr_id 13688.1 lsid BROAD:SEQUENCING_SAMPLE:13688.1 material_type Genomic DNA project G1192 work_request 16895 SRX003061 3403.WR17024.454-1246.645386080701.S.UNMATCHED 4c8d2c54-e8a2-4970-befe-950619673035 SRP000355 Fly isolate Enterococcus_faecalis_Fly1_ltp_EFKG_WGS_Monoisolate PRJNA32945 We propose to use a mix of 15X sequence coverage from a standard fragment library and 30X physical coverage from a jumping library on 454. SRS001101 454-1246 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGCCGAAC 2 forward Application Read Forward 13 454 GS FLX 2008-07-01 20:39:33.0 N/A 454BaseCaller 1.1.03.24 gssr_id 12513.6 lsid BROAD:SEQUENCING_SAMPLE:12513.6 material_type Genomic DNA project G1181 work_request 17024 SRX003062 2615.WR16798.454-1227.645386080701.S.UNMATCHED 9606f9f1-5367-4b22-a1cf-55bd7061f7ae SRP000271 Well studied isolate Neisseria_gonorrhoeae_1291_ltp_NGAG_WGS_Monoisolate PRJNA32783 15X sequence coverage from a standard library and 30X physical coverage from a jumping library on 454. SRS000875 454-1227 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCACCTC 2 forward Application Read Forward 12 454 GS FLX 2008-07-01 20:39:33.0 N/A 454BaseCaller 1.1.03.24 gssr_id 20106.2 lsid BROAD:SEQUENCING_SAMPLE:20106.2 material_type Genomic DNA project G1462 work_request 16798 SRX003063 2898.WR17121.454-1395.645389080822.S.UNMATCHED 5dff4b71-c805-447e-aecf-7426de9a1f04 SRP000850 Comparative genomics of the genus Brucella ltp_AY7_WGS_Multispecies PRJNA31209 shear and sequence on 454 SRS000992 454-1395 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTGACAAC 2 forward Application Read Forward 13 454 GS FLX 2009-02-04 14:50:33.0 N/A 454BaseCaller 2.0.00.17 gssr_id 24624.1 lsid BROAD:SEQUENCING_SAMPLE:24624.1 material_type Genomic DNA project G1596 work_request 17121 SRX003064 2064429.WR36671.Solexa-166690.H0T24ADXX130627.P 2fed4e7d-b87e-41e3-a838-1a98e3348003 SRP026438 PRJNA198146 TB ARC KRITH Mycobacterium_tuberculosis_TKK_01_0051_ltp_K875_WGS_Monoisolate Illumina sequencing of Mycobacterium Tuberculosis TKK-01-0051 via random selection SRS454199 SAMN02053784 TKK-01-0051 Solexa-166690 WGS GENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-28 19:57:08.0 N/A GAPipeline RTA1.17.20 Sequencer Application 2.0.5 gssr_id 340235.0 lsid broadinstitute.org:bsp.prod.sample:4GRF5 material_type DNA:DNA Somatic project G28638 root_sample_id SM-2Z9PP sample_id SM-4GRF5 work_request 36671 SRX003065 235197.WR36419.Pond-243862.C25HAACXX130609.P 1774007f-4ef2-46e6-b8ea-cecfbd70ca10 SRP001634 Microbial composition of samples from infant gut human_metagenome_ltp_G9M_WGS_Environment PRJNA63661 Illumina sequencing of unclassified Bacteria (miscellaneous) via random selection SRS372590 PRJNA218187.11111_ST_08_1 Pond-243862 WGS METAGENOMIC RANDOM 202 0 forward Application Read Forward 1 1 reverse Application Read Reverse 102 Illumina HiSeq 2000 2013-06-20 12:57:28.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 analysis_type AssemblyWithoutReference data_type WGS gssr_id 325394.0 library_type WholeGenomeShotgun lsid broadinstitute.org:bsp.prod.sample:4CFN1 material_type DNA:DNA Genomic product_order PDO-1159 product_part_number P-WG-0004 project G36735 research_project RP-342 root_sample_id SM-2VRUQ sample_id SM-4CFN1 work_request 36419 SRX005946 4622.WR19255.454-2893.708111090617.S.UNMATCHED eb6ad37c-5ded-4f48-8ab2-81ccf93f74ce SRP000512 Reference genome for Human Microbiome Project Lachnospiraceae_oral_taxon_107_str_F0167_ltp_HMPREF0491_WGS_Monoisolate PRJNA42531 10X fragment; 10X physical paired on 454 SRS001982 454-2893 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AAGCCGC 2 forward Application Read Forward 12 454 GS FLX Titanium 2009-07-02 13:21:59.0 N/A 454BaseCaller 2.0.00.22 gssr_id 29741.2 lsid BROAD:SEQUENCING_SAMPLE:29741.2 material_type Genomic DNA project G1774 work_request 19255 SRX005947 27782.WR19372.454-2826.708111090617.S.UNMATCHED 79d52ea9-8873-4c40-a679-5821bb80b9c2 SRP002502 Reference genome for the Human Microbiome Project Bacteroides_sp_3_1_23_ltp_HMPREF9010_WGS_Monoisolate PRJNA38771 10X fragment and 10X physical paired on 454 SRS004179 454-2826 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-07-02 13:21:59.0 N/A 454BaseCaller 2.0.00.22 analysis_type Bacterial 454 Assembly gssr_id 16660.1 lsid BROAD:SEQUENCING_SAMPLE:16660.1 material_type Genomic DNA project G4026 work_request 19372 SRX005948 22809.WR19246.454-2891.708117090609.S.UNMATCHED 2a944564-edef-46d2-86d6-9f90b9c7de70 SRP001642 Reference genome for Human Microbiome Project Bacteroides_sp_1_1_30_ltp_HMPREF0127_WGS_Monoisolate PRJNA41955 15X fragment; 30X physical paired SRS002808 454-2891 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACTCGAAC 2 forward Application Read Forward 14 454 GS FLX Titanium 2009-06-10 11:02:23.0 N/A 454BaseCaller 2.0.00.22 analysis_type Bacterial 454 Assembly gssr_id 16657.3 lsid BROAD:SEQUENCING_SAMPLE:16657.3 material_type Genomic DNA project G1747 work_request 19246 SRX005949 6738.WR19366.454-2920.708228090611.S.UNMATCHED 3167274b-ed7b-44c9-a129-2039d148e62e SRP001611 Origins of Multicellularity Genome Sequencing Opisthokonta_ltp_H095_WGS_Multispecies PRJNA39421 454 Sequencing of a Titanium Fragment Library SRS009681 454-2920 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AATGGTAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-12 11:27:16.0 N/A 454BaseCaller 2.0.00.22 gssr_id 14308.8 lsid BROAD:SEQUENCING_SAMPLE:14308.8 material_type Genomic DNA project G1072 work_request 19366 SRX005950 215374.WR24805.Solexa-59043.B068MABXX110309.tagged_800.P bae8406e-6873-4b41-810c-f8c383ed6555 SRP006297 PRJNA64903 Reference genome for the Human Microbiome Project Treponema_denticola_AL_2_ltp_HMPREF9730_WGS_Monoisolate low coverage of genome on Illumina SRS184242 PRJNA28331.Treponema denticola Solexa-59043 WGS GENOMIC RANDOM 210 0 forward Application Read Forward 1 1 barcode Technical Read BarCode TACTTAGC 2 reverse Application Read Reverse 110 Illumina HiSeq 2000 2011-03-28 19:57:26.0 N/A GAPipeline RTA1.10.36 Sequencer Application 1.3.8 gssr_id 65747.2 lsid BROAD:SEQUENCING_SAMPLE:65747.2 material_type Genomic DNA project G10815 work_request 24805 SRX005951 7264.WR18997.454-2789.712106090720.S.UNMATCHED c34e10b9-43c1-4d5d-aa74-aea7a89e5b94 SRP000750 Staphylococcus aureus WGS_Multiisolate PRJNA37747 10X fragment coverage SRS002899 454-2789 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AAGGCCTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-07-24 12:00:06.0 N/A 454BaseCaller 2.0.00.22 gssr_id 21984.3 lsid BROAD:SEQUENCING_SAMPLE:21984.3 material_type Genomic DNA project G1677 work_request 18997 SRX005952 256.WR17560.Solexa-5069.30D7EAAXX081004.P-Reverse SRP000031 1000Genomes Project Pilot 1 WGSWithRef Sequence 2 lanes on Illumina SRS000095 NA18498 Solexa-5069 WGS GENOMIC RANDOM 76 0 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24674.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWC BI Project Name G1479 BI Work Request ID 17560 SRX005953 19071.WR18756.454-2736.712107090403.S.UNMATCHED bc998011-ea3a-46f4-b2ae-131dc2e9a70d SRP001138 Comparative genomics of Vibrio cholerae ltp_COQ_WGS_Multiisolate PRJNA40377 Vibrio cholerae Comparative SRS006322 454-2736 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACCTGGC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-07 17:44:11.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 31858.1 lsid BROAD:SEQUENCING_SAMPLE:31858.1 material_type Genomic DNA project G1742 work_request 18756 SRX005954 3560.WR18951.454-2714.712115090331.S.UNMATCHED f6a141b5-6c1d-4520-a3d8-ec3c9109ae64 SRP001126 An ampicillin susceptible phoenotype Enterococcus_faecium_D344SRF_ltp_EDAG_WGS_Monoisolate PRJNA32079 454 sequencing of Enterococcus faecium D344SRF via random selection SRS004976 454-2714 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCCGTCCGC 2 forward Application Read Forward 14 454 GS FLX Titanium 2009-04-12 19:57:14.0 N/A 454BaseCaller 2.0.00.22 gssr_id 25510.3 lsid BROAD:SEQUENCING_SAMPLE:25510.3 material_type Genomic DNA project G1630 work_request 18951 SRX005955 256.WR17559.Solexa-5066.30D7EAAXX081004.P-Reverse SRP000031 1000Genomes Project Pilot 1 WGSWithRef Sequence 4 lanes on Illumina SRS000099 NA18504 Solexa-5066 WGS GENOMIC RANDOM 76 0 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24671.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW9 BI Project Name G1476 BI Work Request ID 17559 SRX005956 1465360.WR35091.Pond-220517.C1MYYACXX130224.P fdd0148e-241b-4cfa-94c4-b0dd750f600f SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350722 SAMN01090832 HG03578 Pond-220517 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:39:56.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288653.0 lsid broadinstitute.org:bsp.prod.sample:3VEAS material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4WS sample_id SM-3VEAS target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX005957 1465360.WR35091.Pond-220515.D1RYEACXX130302.P a720f23d-c3c5-4221-81c3-8655609c1324 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350697 SAMN01090807 HG03458 Pond-220515 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288651.0 lsid broadinstitute.org:bsp.prod.sample:3VEAQ material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4X6 sample_id SM-3VEAQ target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX005958 6744.WR18869.454-2735.712116090410.S.UNMATCHED 572d5e13-b570-4bad-a25a-17e1328fb819 SRP000717 WGS sequencing Puccinia_triticina_1_1_BBBD_Race_1_lt_PTTG_Monoisolate PRJNA36323 Sequencing of the Puccinia triticina 1-1, race 1 genome using 454 Titanium fragment coverage at 20X the genome size. SRS285397 454-2735 WGS GENOMIC RANDOM 454 WGS 0 key_seqeuence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-12 07:01:10.0 N/A 454BaseCaller 2.0.00.22 gssr_id 31716.1 lsid BROAD:SEQUENCING_SAMPLE:31716.1 material_type Genomic DNA project G2022 work_request 18869 SRX005989 256.WR19317.Solexa-5121.3026HAAXX090521.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000184 NA19102 Solexa-5121 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR sample ID 24684.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:FBWM BI project name G1489 BI work request ID 19317 SRX005991 256.WR19324.Solexa-6403.30292AAXX090520.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000165 NA18961 Solexa-6403 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25105.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B5 BI Project Name G1527 BI Work Request ID 19324 SRX005992 256.WR16962.Solexa-5408.3032GAAXX080708.S SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence 14 lanes on Illumina SRS000052 Solexa-5408 WGS GENOMIC RANDOM 51 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR Sample ID 25096.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AV BI Project Name G1518 BI Work Request ID 16962 SRX005993 6744.WR18869.454-2735.712116090414.S.UNMATCHED 24ff1448-9d2a-42ff-abc0-75b9caa183ff SRP000717 WGS sequencing Puccinia_triticina_1_1_BBBD_Race_1_lt_PTTG_Monoisolate PRJNA36323 Sequencing of the Puccinia triticina 1-1, race 1 genome using 454 Titanium fragment coverage at 20X the genome size. SRS285397 454-2735 WGS GENOMIC RANDOM 454 WGS 0 key_seqeuence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-15 21:20:56.0 N/A 454BaseCaller 2.0.00.22 gssr_id 31716.1 lsid BROAD:SEQUENCING_SAMPLE:31716.1 material_type Genomic DNA project G2022 work_request 18869 SRX005994 9625.WR18540.454-2500.712121090331.S.UNMATCHED 3cb18d36-1256-412b-85fe-bfeb43b7d47f SRP000964 Elephas maximus Genome sequencing female_ltp_CE5_WGS_Monoisolate PRJNA37917 454 Sequencing for a fragment library from Elephant "Moola" SRS004187 454-2500 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGGTGAAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-21 23:57:06.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 27208.2 lsid BROAD:SEQUENCING_SAMPLE:27208.2 material_type Tissue project G1939 sample_type blood work_request 18540 SRX005995 9625.WR18541.454-2668.712123090403.S.UNMATCHED c35a2715-288d-42d8-be4e-d0e0abd6e670 SRP000964 Elephas maximus Genome sequencing female_ltp_CE5_WGS_Monoisolate PRJNA37917 454 Sequencing of a fragment library from Elephant "Chendra" SRS004188 454-2668 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CGGTCTTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-04 04:05:48.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 30157.2 lsid BROAD:SEQUENCING_SAMPLE:30157.2 material_type Tissue project G1940 sample_type Blood work_request 18541 SRX005996 6744.WR18869.454-2735.712533090410.S.UNMATCHED d2db82e4-ae1d-4b82-8151-c057e89248cc SRP000717 WGS sequencing Puccinia_triticina_1_1_BBBD_Race_1_lt_PTTG_Monoisolate PRJNA36323 Sequencing of the Puccinia triticina 1-1, race 1 genome using 454 Titanium fragment coverage at 20X the genome size. SRS285397 454-2735 WGS GENOMIC RANDOM 454 WGS 0 key_seqeuence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-12 09:37:31.0 N/A 454BaseCaller 2.0.00.22 gssr_id 31716.1 lsid BROAD:SEQUENCING_SAMPLE:31716.1 material_type Genomic DNA project G2022 work_request 18869 SRX005997 1465360.WR35091.Pond-220515.C1NKEACXX130223.P 995b2226-0236-4df5-b100-620eeaa3dbc1 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350697 SAMN01090807 HG03458 Pond-220515 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 16:52:49.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288651.0 lsid broadinstitute.org:bsp.prod.sample:3VEAQ material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4X6 sample_id SM-3VEAQ target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX005998 1465360.WR35091.Pond-220515.C1MYYACXX130224.P f66f2cdd-0a2c-40b2-ae11-5aa806b88aff SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350697 SAMN01090807 HG03458 Pond-220515 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:39:56.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288651.0 lsid broadinstitute.org:bsp.prod.sample:3VEAQ material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4X6 sample_id SM-3VEAQ target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX005999 256.WR19305.Solexa-5105.428DBAAXX090523.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000094 NA18489 Solexa-5105 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24668.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW6 BI Project Name G1473 BI Work Request ID 19305 SRX006000 256.WR19322.Solexa-5411.428EAAAXX090604.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000031 Solexa-5411 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25099.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AY BI Project Name G1521 BI Work Request ID 19322 SRX006001 256.WR19335.Solexa-5125.428GVAAXX090610.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000107 NA18519 Solexa-5125 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24688.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWQ BI Project Name G1493 BI Work Request ID 19335 SRX006002 6744.WR18869.454-2735.712533090414.S.UNMATCHED 8154f88e-179d-4d39-834d-a420af091ff2 SRP000717 WGS sequencing Puccinia_triticina_1_1_BBBD_Race_1_lt_PTTG_Monoisolate PRJNA36323 Sequencing of the Puccinia triticina 1-1, race 1 genome using 454 Titanium fragment coverage at 20X the genome size. SRS285397 454-2735 WGS GENOMIC RANDOM 454 WGS 0 key_seqeuence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-02 00:58:09.0 N/A 454BaseCaller 2.0.00.22 gssr_id 31716.1 lsid BROAD:SEQUENCING_SAMPLE:31716.1 material_type Genomic DNA project G2022 work_request 18869 SRX006003 1465360.WR35091.Pond-220507.D1RYEACXX130302.P 007f7ab2-741d-41e1-837f-de30c7ab6f79 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350705 SAMN01090815 HG03548 Pond-220507 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288643.0 lsid broadinstitute.org:bsp.prod.sample:3VEAI material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YJ sample_id SM-3VEAI target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX006706 256.WR19329.Solexa-5415.429E2AAXX090708.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000049 Solexa-5415 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25103.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B3 BI Project Name G1525 BI Work Request ID 19329 SRX006708 27782.WR19099.454-2826.712609090423.S.UNMATCHED 692f1e41-aaf6-428b-bffe-ce2b4c1b68eb SRP002502 Reference genome for the Human Microbiome Project Bacteroides_sp_3_1_23_ltp_HMPREF9010_WGS_Monoisolate PRJNA38771 10X fragment; 10X physical paired SRS004179 454-2826 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-04 10:15:28.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 16660.1 lsid BROAD:SEQUENCING_SAMPLE:16660.1 material_type Genomic DNA project G4026 work_request 19099 SRX007347 256.WR19311.Solexa-6416.429LLAAXX090717.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000141 NA18853 Solexa-6416 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24676.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWE BI Project Name G1481 BI Work Request ID 19311 SRX007348 7264.WR18997.454-2783.712620090806.S.UNMATCHED 6630e60f-99ae-46d8-8cd1-5ac59ac0bf6e SRP000750 Staphylococcus aureus WGS_Multiisolate PRJNA37747 10X fragment coverage SRS002874 454-2783 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACCTGGC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-08-11 11:21:35.0 N/A 454BaseCaller 2.0.01.12 gssr_id 21976.3 lsid BROAD:SEQUENCING_SAMPLE:21976.3 material_type Genomic DNA project G1677 work_request 18997 SRX007350 256.WR19336.Solexa-5401.429EGAAXX090716.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000062 Solexa-5401 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25089.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AO BI Project Name G1511 BI Work Request ID 19336 SRX007352 256.WR19325.Solexa-5400.429EGAAXX090716.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000050 Solexa-5400 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25088.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AN BI Project Name G1510 BI Work Request ID 19325 SRX007356 256.WR19335.Solexa-5125.429LLAAXX090717.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000107 NA18519 Solexa-5125 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24688.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWQ BI Project Name G1493 BI Work Request ID 19335 SRX007360 27789.WR18617.454-2656.712641090407.S.UNMATCHED 9aa09f22-28fd-4d47-92e6-88ee854b7faa SRP002496 Reference genome for the Human Microbiome Project Streptococcus_sp_C300_ltp_HMPREF0849_WGS_Monoisolate PRJNA38753 10X fragment; 10X physical paired SRS004172 454-2656 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTCCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-08 04:34:34.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 28799.2 lsid BROAD:SEQUENCING_SAMPLE:28799.2 material_type Genomic DNA project G4021 work_request 18617 SRX007362 256.WR19326.Solexa-5403.42962AAXX090717.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000056 Solexa-5403 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25091.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AQ BI Project Name G1513 BI Work Request ID 19326 SRX007365 256.WR19318.Solexa-6425.42962AAXX090717.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000146 NA18871 Solexa-6425 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24685.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWN BI Project Name G1490 BI Work Request ID 19318 SRX007367 256.WR19313.Solexa-5114.429LLAAXX090717.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000093 NA18486 Solexa-5114 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24677.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWF BI Project Name G1483 BI Work Request ID 19313 SRX007482 256.WR19341.Solexa-5420.42F06AAXX090806.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000054 Solexa-5420 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25108.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B8 BI Project Name G1530 BI Work Request ID 19341 SRX007484 1465360.WR34770.Pond-217789.D1R04ACXX130306.P d8dfc5a4-8df2-4238-b726-abb349496cf7 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350713 SAMN01090823 HG03563 Pond-217789 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-15 07:24:36.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 286334.0 lsid broadinstitute.org:bsp.prod.sample:3UE7D material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4X4 sample_id SM-3UE7D target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 34770 SRX007486 7254.WR18605.454-2663.714448090320.S.UNMATCHED cc68aeea-e0da-44ca-b075-2ab6fb31dc72 SRP001075 Reference genome for the Human Microbiome Project Actinomyces_viscosus_C505_ltp_HMPREF0059_WGS_Monoisolate PRJNA38743 10X fragment; 10X physical paired SRS004704 454-2663 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCGGTCGC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-16 17:11:16.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 28786.2 lsid BROAD:SEQUENCING_SAMPLE:28786.2 material_type Genomic DNA project G1936 work_request 18605 SRX007489 256.WR19345.Solexa-5404.42DUKAAXX090805.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000042 NA11830 Solexa-5404 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25092.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AR BI Project Name G1514 BI Work Request ID 19345 SRX007491 11019.WR19367.454-2922.715174090624.S.UNMATCHED b80b4911-e771-4392-8daf-e7b708f8465d SRP001083 WGS sequencing Gaeumannomyces_graminis_var_tritici_R3_111a_1_ltp_GGTG_Monoisolate PRJNA37931 454 sequencing of Gaeumannomyces graminis var. tritici via random selection SRS004744 454-2922 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCCAAGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-25 03:02:31.0 N/A 454BaseCaller 2.0.00.22 gssr_id 26157.7 lsid BROAD:SEQUENCING_SAMPLE:26157.7 material_type Genomic DNA project G1676 work_request 19367 SRX007493 22821.WR19101.454-2827.715236090501.S.UNMATCHED 7dc8bc62-3f18-4686-8d40-a4532398b482 SRP001658 Reference genome for Human Microbiome Project Erysipelotrichaceae_bacterium_2_2_44A_ltp_HMPREF9022_WGS_Monoisolate PRJNA41983 15x fragment; 30x physical paired SRS002826 454-2827 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAGGAATC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-04 10:59:43.0 N/A 454BaseCaller 2.0.00.22 analysis_type Bacterial 454 Assembly gssr_id 16675.1 lsid BROAD:SEQUENCING_SAMPLE:16675.1 material_type Genomic DNA project G2112 work_request 19101 SRX007495 256.WR19342.Solexa-5446.42DUKAAXX090805.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000037 Solexa-5446 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25086.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AL BI Project Name G1508 BI Work Request ID 19342 SRX007497 11019.WR19367.454-2922.715238090618.S.UNMATCHED 2c6fb5b5-4404-43eb-9b09-6a0c4266c6f0 SRP001083 WGS sequencing Gaeumannomyces_graminis_var_tritici_R3_111a_1_ltp_GGTG_Monoisolate PRJNA37931 454 sequencing of Gaeumannomyces graminis var. tritici via random selection SRS004744 454-2922 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCCAAGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-19 12:28:41.0 N/A 454BaseCaller 2.0.00.22 gssr_id 26157.7 lsid BROAD:SEQUENCING_SAMPLE:26157.7 material_type Genomic DNA project G1676 work_request 19367 SRX007499 256.WR19315.Solexa-5119.428FFAAXX090804.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000096 NA18499 Solexa-5119 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24682.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWK BI Project Name G1487 BI Work Request ID 19315 SRX007501 175983.WR24686.454-6998.747109110325.Tokyo.S ec271c62-e85d-40f8-a421-4be2c9f5ad34 SRP006092 PRJNA46393 Reference genome for the Human Microbiome Project Clostridium_hathewayi_WAL_18680_ltp_HMPREF9473_WGS_Monoisolate low coverage of genome on 454 SRS182618 BROAD:SEQUENCING_SAMPLE:46620.0 454-6998 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2011-04-11 21:51:51.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 46620.1 lsid BROAD:SEQUENCING_SAMPLE:46620.1 material_type Genomic DNA project G10710 work_request 24686 SRX005945 256.WR16970.Solexa-5416.3040TAAXX080627.P-Reverse SRP000031 1000Genomes Project Pilot 1 1000 Genomes Pilot 1 (aka pilot 1A) SRS000035 Solexa-5416 WGS GENOMIC RANDOM 51 0 reverse Application Read Reverse 52 Illumina Genome Analyzer II BI GSSR sample ID 25104.0 BI GSSR sample LSID broad.mit.edu:bsp.prod.sample:G3B4 BI project name G1526 BI work request ID 16970 SRX006705 256.WR19327.Solexa-5406.429E2AAXX090708.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000043 Solexa-5406 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25094.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AT BI Project Name G1516 BI Work Request ID 19327 SRX006707 1465360.WR35091.Pond-220495.D1RYEACXX130302.P dc3b7507-afdd-4c40-ad54-dcc360a515a2 SRP015235 PRJNA173702 Homo_sapiens_MSL_Mende_in_Sierra_Leone_lcl_exome_MSL_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350708 SAMN01090818 HG03391 Pond-220495 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288631.0 lsid broadinstitute.org:bsp.prod.sample:3VEA6 material_type DNA:DNA Somatic product_order PDO-209 project C958 research_project RP-21 root_sample_id SM-3O4YY sample_id SM-3VEA6 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX007349 256.WR19321.Solexa-5124.429EGAAXX090716.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000105 NA18516 Solexa-5124 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24687.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWP BI Project Name G1492 BI Work Request ID 19321 SRX007351 22818.WR19235.454-2866.712621090515.S.UNMATCHED faca6dad-5efd-490a-8000-340fac1140f8 SRP001654 Reference genome for the Human Microbiome Project Simonsiella_muelleri_ATCC_29453_ltp_HMPREF9021_WGS_Monoisolate PRJNA41981 15x fragment; 30x physical paired SRS003102 454-2866 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACGAGAAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-26 09:55:48.0 N/A 454BaseCaller 2.0.00.22 analysis_type Bacterial 454 Assembly gssr_id 33053.1 lsid BROAD:SEQUENCING_SAMPLE:33053.1 material_type Genomic DNA project G2138 work_request 19235 SRX007353 256.WR19318.Solexa-6425.429EGAAXX090716.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000146 NA18871 Solexa-6425 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24685.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWN BI Project Name G1490 BI Work Request ID 19318 SRX007355 256.WR19316.Solexa-6423.429LLAAXX090717.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000161 NA18953 Solexa-6423 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24683.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWL BI Project Name G1488 BI Work Request ID 19316 SRX007357 22820.WR19235.454-2861.712621090515.S.UNMATCHED 97cdb938-ee5a-4557-ad30-4a579bf4ff97 SRP001653 Reference genome for Human Microbiome Project Capnocytophaga_granulosa_ATCC_51502_ltp_HMPREF9331_WGS_Monoisolate PRJNA41985 15x fragment; 30x physical paired SRS003103 454-2861 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTCCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-26 09:55:48.0 N/A 454BaseCaller 2.0.00.22 analysis_type Bacterial 454 Assembly gssr_id 33054.1 lsid BROAD:SEQUENCING_SAMPLE:33054.1 material_type Genomic DNA project G2139 work_request 19235 SRX007358 2916.WR19599.454-3068.712634090903.P.UNMATCHED a05a6413-1093-42d6-b1aa-09bf290ce827 SRP000325 Antibiotic producing strain Streptomyces_roseosporus_NRRL_11379_ltp_SSIG_WGS_Monoisolate PRJNA32281 Sequence 3kb jumping library to 30X physical coverage using 454 Titanium reads. SRS001030 454-3068 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTGGAGGC 2 forward Application Read Forward 13 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2009-09-04 17:24:56.0 N/A 454BaseCaller 2.0.01.12 gssr_id 16533.16 lsid BROAD:SEQUENCING_SAMPLE:16533.16 material_type Genomic DNA project G1232 work_request 19599 SRX007359 12860.WR19707.454-3141.712634090903.S.UNMATCHED b721eb16-673b-421c-b05e-0f80f8ed8f42 SRP001136 Escherichia_albertii_WGS_Multiisolate PRJNA38065 454 sequencing of Escherichia albertii B090 via random selection SRS005067 454-3141 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTTGGC 2 forward Application Read Forward 12 454 GS FLX Titanium 2009-09-04 17:24:56.0 N/A 454BaseCaller 2.0.01.12 analysis_type Bacterial 454 Assembly gssr_id 25762.4 lsid BROAD:SEQUENCING_SAMPLE:25762.4 material_type Genomic DNA project G1653 work_request 19707 SRX007361 256.WR19305.Solexa-5105.42962AAXX090717.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000094 NA18489 Solexa-5105 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24668.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW6 BI Project Name G1473 BI Work Request ID 19305 SRX007363 1517030.WR33953.Pond-206557.D1K99ACXX130102.P 3ee5bbb4-baa7-4ed2-ab30-c8f4ac745cc6 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350899 SAMN01091009 HG03725 Pond-206557 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-11 05:31:50.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274195.0 lsid broadinstitute.org:bsp.prod.sample:3QRNN material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H119 sample_id SM-3QRNN target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX007364 1517030.WR33953.Pond-206559.C1EE6ACXX121228.P c1b0ddc3-921d-43eb-95de-a2d40faf3e1d SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350898 SAMN01091008 HG03717 Pond-206559 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-06 04:01:41.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274197.0 lsid broadinstitute.org:bsp.prod.sample:3QRNP material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H117 sample_id SM-3QRNP target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX007366 27783.WR18617.454-2655.712641090407.S.UNMATCHED 33e91ed5-4ba9-4573-8b19-3d009f43c038 SRP002491 Reference genome for the Human Microbiome Project Streptococcus_sp_M143_ltp_HMPREF0850_WGS_Monoisolate PRJNA38755 10X fragment; 10X physical paired SRS004173 454-2655 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AATGGTAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-08 04:34:34.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 28797.2 lsid BROAD:SEQUENCING_SAMPLE:28797.2 material_type Genomic DNA project G4022 work_request 18617 SRX007483 7259.WR18615.454-2654.714448090320.S.UNMATCHED a20b271f-311d-4ba5-931b-71a477ff2bc0 SRP001072 Reference genome for the Human Microbiome Project Staphylococcus_caprae_C87_ltp_HMPREF0786_WGS_Monoisolate PRJNA38749 10X fragment; 10X physical paired SRS004698 454-2654 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCGGCCAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-16 17:11:16.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 28795.2 lsid BROAD:SEQUENCING_SAMPLE:28795.2 material_type Genomic DNA project G1950 work_request 18615 SRX007485 256.WR19328.Solexa-5414.42F06AAXX090806.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000166 NA18964 Solexa-5414 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25102.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B2 BI Project Name G1524 BI Work Request ID 19328 SRX007487 7253.WR18606.454-2652.714448090320.S.UNMATCHED 4cac084a-0325-403a-b96d-61145b2e4b3e SRP001069 Reference genome for the Human Microbiome Project Actinomyces_odontolyticus_C702_ltp_HMPREF0051_WGS_Monoisolate PRJNA38741 10X fragment; 10X physical paired SRS004688 454-2652 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-16 17:11:16.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 28785.2 lsid BROAD:SEQUENCING_SAMPLE:28785.2 material_type Genomic DNA project G1935 work_request 18606 SRX007488 6744.WR19435.454-3021.715150090709.P.UNMATCHED 34ea4119-52b8-4b55-85a2-442a2ec17710 SRP000717 WGS sequencing Puccinia_triticina_1_1_BBBD_Race_1_lt_PTTG_Monoisolate PRJNA36323 30X coverage of the Puccinia triticina 1-1 genome using 454 3kb jumping library SRS285397 454-3021 WGS GENOMIC RANDOM 0 key_seqeuence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTGGAGGC 2 forward Application Read Forward 13 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2009-07-20 01:37:18.0 N/A 454BaseCaller 2.0.01.12 gssr_id 33706.1 lsid BROAD:SEQUENCING_SAMPLE:33706.1 material_type Genomic DNA project G2022 work_request 19435 SRX007490 6738.WR19366.454-2920.715174090624.S.UNMATCHED 133f5de2-3dd7-48ef-9673-154080090ff7 SRP001611 Origins of Multicellularity Genome Sequencing Opisthokonta_ltp_H095_WGS_Multispecies PRJNA39421 454 Sequencing of a Titanium Fragment Library SRS009681 454-2920 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AATGGTAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-25 03:02:31.0 N/A 454BaseCaller 2.0.00.22 gssr_id 14308.8 lsid BROAD:SEQUENCING_SAMPLE:14308.8 material_type Genomic DNA project G1072 work_request 19366 SRX007492 256.WR19314.Solexa-6419.42DUKAAXX090805.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000202 NA19172 Solexa-6419 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24679.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWH BI Project Name G1484 BI Work Request ID 19314 SRX007494 6738.WR19366.454-2920.715238090618.S.UNMATCHED 487617b3-2052-4600-8a2f-028c30e17c28 SRP001611 Origins of Multicellularity Genome Sequencing Opisthokonta_ltp_H095_WGS_Multispecies PRJNA39421 454 Sequencing of a Titanium Fragment Library SRS009681 454-2920 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AATGGTAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-06-19 12:28:41.0 N/A 454BaseCaller 2.0.00.22 gssr_id 14308.8 lsid BROAD:SEQUENCING_SAMPLE:14308.8 material_type Genomic DNA project G1072 work_request 19366 SRX007496 256.WR19340.Solexa-5419.428FFAAXX090804.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000041 Solexa-5419 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25107.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B7 BI Project Name G1529 BI Work Request ID 19340 SRX007498 9625.WR18540.454-2500.715242090423.S.UNMATCHED dc915d0a-493c-4a2a-a1d0-d55efa5f4536 SRP000964 Elephas maximus Genome sequencing female_ltp_CE5_WGS_Monoisolate PRJNA37917 454 Sequencing for a fragment library from Elephant "Moola" SRS004187 454-2500 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGGTGAAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-04 14:19:43.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 27208.2 lsid BROAD:SEQUENCING_SAMPLE:27208.2 material_type Tissue project G1939 sample_type blood work_request 18540 SRX007500 6727.WR19104.454-2830.715242090423.S.UNMATCHED 51b1c9ed-0fb0-4bc5-b699-2a73d331da47 SRP001074 Reference genome for the Human Microbiome Project Leptotrichia_goodfellowii_D28_ltp_HMPREF9014_WGS_Monoisolate PRJNA38775 15x fragment; 30x physical paired SRS004700 454-2830 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACACAAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-04 14:19:43.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 28887.1 lsid BROAD:SEQUENCING_SAMPLE:28887.1 material_type Genomic DNA project G2113 work_request 19104 SRX007502 256.WR19313.Solexa-5114.428FFAAXX090804.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000093 NA18486 Solexa-5114 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24677.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWF BI Project Name G1483 BI Work Request ID 19313 SRX007904 256.WR19343.Solexa-5399.42EVYAAXX090821.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000164 NA18960 Solexa-5399 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25087.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AM BI Project Name G1509 BI Work Request ID 19343 SRX007905 1517030.WR33953.Pond-206566.D1K99ACXX130102.P ff8e05ce-7ca9-4217-957c-3ba04a1e0634 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350906 SAMN01091016 HG03731 Pond-206566 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-11 05:31:50.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274203.0 lsid broadinstitute.org:bsp.prod.sample:3QRNW material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H11D sample_id SM-3QRNW target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX007906 21361.WR20688.454-3623.722054100120.S.UNMATCHED 6ee03828-8631-4a7e-ad0b-7784beca7a99 SRP001782 This genome will be used for comparative analysis Fusobacterium_nucleatum_subsp_polymorphum_F0401_ltp_HMPREF9369_WGS_Monoisolate PRJNA41987 low coverage on 454 SRS010001 454-3623 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ATACCAC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-01-21 18:32:37.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 42479.2 lsid BROAD:SEQUENCING_SAMPLE:42479.2 material_type Genomic DNA project G2849 work_request 20688 SRX007907 12861.WR20498.454-3540.722084091215.S.UNMATCHED 6157ce5a-2af1-47c1-9df3-d4e8c3fe4dff SRP001132 Escherichia fergusonii B253 genome sequencing project ltp_ERIG_WGS_Monoisolate PRJNA38067 454 sequencing of Escherichia fergusonii B253 via random selection SRS005040 454-3540 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCTCTC 2 forward Application Read Forward 11 454 GS FLX Titanium 2009-12-16 01:47:47.0 N/A 454BaseCaller 2.0.01.12 analysis_type Bacterial 454 Alignment and Assembly gssr_id 25768.6 lsid BROAD:SEQUENCING_SAMPLE:25768.6 material_type Genomic DNA project G1654 work_request 20498 SRX007908 256.WR19342.Solexa-5446.42EVYAAXX090821.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000037 Solexa-5446 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25086.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AL BI Project Name G1508 BI Work Request ID 19342 SRX007909 256.WR19323.Solexa-5461.42EVYAAXX090821.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000044 Solexa-5461 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25101.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B1 BI Project Name G1523 BI Work Request ID 19323 SRX007910 256.WR19317.Solexa-5121.42EVYAAXX090821.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000184 NA19102 Solexa-5121 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24684.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWM BI Project Name G1489 BI Work Request ID 19317 SRX007911 256.WR19338.Solexa-5416.42C80AAXX090804.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000035 Solexa-5416 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25104.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B4 BI Project Name G1526 BI Work Request ID 19338 SRX007912 12048.WR20442.454-3354.722244091125.S.UNMATCHED 00294950-78e1-4ae7-892d-b3061e77d9ed SRP001277 Reference genome for the Human Microbiome Project Lachnospiraceae_bacterium_4_1_37FAA_ltp_HMPREF0985_WGS_Monoisolate PRJNA39393 Low coverage on 454 SRS006267 454-3354 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TGCCGAAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-11-26 10:06:51.0 N/A 454BaseCaller 2.0.01.12 analysis_type Bacterial 454 Alignment and Assembly gssr_id 37278.1 lsid BROAD:SEQUENCING_SAMPLE:37278.1 material_type Genomic DNA project G2220 work_request 20442 SRX007913 256.WR19344.Solexa-5402.42C80AAXX090804.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000065 NA12155 Solexa-5402 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25090.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AP BI Project Name G1512 BI Work Request ID 19344 SRX007914 256.WR19346.Solexa-5410.42C80AAXX090804.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000064 Solexa-5410 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25098.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AX BI Project Name G1520 BI Work Request ID 19346 SRX007915 12049.WR20443.454-3356.722244091125.S.UNMATCHED 52891eac-4852-4f39-a6a2-b62805fc0552 SRP001275 Reference genome for the Human Microbiome Project Lachnospiraceae_bacterium_1_4_56FAA_ltp_HMPREF0988_WGS_Monoisolate PRJNA39379 Low coverage on 454 SRS006265 454-3356 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAGGAATC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-11-26 10:06:51.0 N/A 454BaseCaller 2.0.01.12 analysis_type Bacterial 454 Alignment and Assembly gssr_id 37276.1 lsid BROAD:SEQUENCING_SAMPLE:37276.1 material_type Genomic DNA project G2221 work_request 20443 SRX007916 12050.WR20444.454-3358.722244091125.S.UNMATCHED fc9f83a8-7e0a-4d66-91d6-89af8ec4cc24 SRP001276 This strain will be used for comparative genome analysis Escherichia_coli_4_1_47FAA_ltp_HMPREF0986_WGS_Monoisolate PRJNA39385 Low coverage on 454 SRS006266 454-3358 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AATGGTAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-11-26 10:06:51.0 N/A 454BaseCaller 2.0.01.12 analysis_type Bacterial 454 Alignment and Assembly gssr_id 36682.1 lsid BROAD:SEQUENCING_SAMPLE:36682.1 material_type Genomic DNA project G2222 work_request 20444 SRX008302 256.WR19337.Solexa-5409.42GNTAAXX090902.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000163 NA18959 Solexa-5409 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25097.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AW BI Project Name G1519 BI Work Request ID 19337 SRX008303 20239.WR20554.454-3591.722709100106.S.UNMATCHED 53354e0c-cf8c-4743-93b7-9c74a1c85272 SRP001687 Microbotryum violaceum p1A1 Lamole genome sequencing project ltp_MVLG_WGS_Monoisolate PRJNA41281 low fragment coverage on 454 SRS009688 454-3591 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCGTTATC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-01-08 21:12:28.0 N/A 454BaseCaller 2.3 analysis_type Standard 454 Base Calling and Alignment gssr_id 41285.1 lsid BROAD:SEQUENCING_SAMPLE:41285.1 material_type Genomic DNA project G2496 work_request 20554 SRX008304 1517030.WR33953.Pond-206570.D1JMAACXX121226.P 50baa066-a33b-4fc9-8387-0c61b871b144 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350921 SAMN01091031 HG03862 Pond-206570 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-05 13:01:16.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274207.0 lsid broadinstitute.org:bsp.prod.sample:3QRO1 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H124 sample_id SM-3QRO1 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX008305 12047.WR19795.454-3228.715650090929.S.UNMATCHED 638789a0-8d08-417f-a45c-efe9bc7a0e63 SRP001129 Reference genome for the Human Microbiome Project Dorea_sp_D27_ltp_HMPREF0980_WGS_Monoisolate PRJNA39367 Low coverage of genome on 454 SRS005003 454-3228 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AATGGTAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-09-30 13:48:21.0 N/A 454BaseCaller 2.0.01.12 analysis_type Bacterial 454 Alignment and Assembly gssr_id 35448.1 lsid BROAD:SEQUENCING_SAMPLE:35448.1 material_type Genomic DNA project G2219 work_request 19795 SRX008306 256.WR19346.Solexa-5410.42GNTAAXX090902.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000064 Solexa-5410 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25098.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AX BI Project Name G1520 BI Work Request ID 19346 SRX008307 12054.WR19796.454-3226.715650090929.S.UNMATCHED c0f6a38d-7716-4b0a-bf0c-85522d00b8d2 SRP001128 Reference genome for the Human Microbiome Project Porphyromonas_sp_31_2_ltp_HMPREF1002_WGS_Monoisolate PRJNA39411 Low coverage of genome on 454 SRS005001 454-3226 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAGGAATC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-09-30 13:48:21.0 N/A 454BaseCaller 2.0.01.12 analysis_type Bacterial 454 Alignment and Assembly gssr_id 35442.1 lsid BROAD:SEQUENCING_SAMPLE:35442.1 material_type Genomic DNA project G2226 work_request 19796 SRX008308 1517030.WR33953.Pond-206570.D1K99ACXX130102.P 63310701-6313-48ff-a44e-6c4c0935a53b SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350921 SAMN01091031 HG03862 Pond-206570 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-11 05:31:50.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274207.0 lsid broadinstitute.org:bsp.prod.sample:3QRO1 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H124 sample_id SM-3QRO1 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX008309 6728.WR19099.454-2829.718350090508.S.UNMATCHED 4170372d-718f-41a3-a59d-d8e51b809d6d SRP000959 Reference genome for the Human Microbiome Project Bacteroides_sp_1_1_14_ltp_HMPREF9007_WGS_Monoisolate PRJNA38765 10X fragment; 10X physical paired SRS004175 454-2829 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCGTGGC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-22 11:41:18.0 N/A 454BaseCaller 2.0.00.22 analysis_type Assembly gssr_id 17316.1 lsid BROAD:SEQUENCING_SAMPLE:17316.1 material_type Genomic DNA project G2111 work_request 19099 SRX008335 256.WR19306.Solexa-6409.42GVCAAXX090905.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000187 NA19116 Solexa-6409 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24669.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW7 BI Project Name G1474 BI Work Request ID 19306 SRX008336 1517030.WR33953.Pond-206571.C1EE6ACXX121228.P 55657fc3-46a3-4e6c-8603-fa4f79c4c2a4 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350910 SAMN01091020 HG03781 Pond-206571 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-06 04:01:41.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274208.0 lsid broadinstitute.org:bsp.prod.sample:3QRO2 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H11W sample_id SM-3QRO2 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX008337 20239.WR21099.454-4120.720984100312.P.UNMATCHED 7acd96f6-7802-4a68-860c-e678edd3c574 SRP001687 Microbotryum violaceum p1A1 Lamole genome sequencing project ltp_MVLG_WGS_Monoisolate PRJNA41281 low 8kb jumping coverage on 454 SRS025195 454-4120 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTTGGC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-03-22 10:44:36.0 N/A 454BaseCaller 2.3 analysis_type Standard 454 Base Calling and Alignment gssr_id 46515.1 lsid BROAD:SEQUENCING_SAMPLE:46515.1 material_type Genomic DNA project G2496 work_request 21099 SRX008338 12040.WR20294.454-3494.722778091125.S.UNMATCHED 51187295-b381-432f-a071-41b03986e72b SRP001448 Ajellomyces dermatitidis ATCC 26199 genome sequencing ltp_BDFG_WGS_Monoisolate PRJNA39263 Low coverage of genome on 454 SRS007467 454-3494 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGTAATC 2 forward Application Read Forward 14 454 GS FLX Titanium 2009-11-30 19:39:22.0 N/A 454BaseCaller 2.0.01.12 analysis_type Standard 454 Base Calling and Alignment gssr_id 36128.2 lsid BROAD:SEQUENCING_SAMPLE:36128.2 material_type Genomic DNA project G2259 work_request 20294 SRX008339 22769.WR20447.454-3536.722809091228.S.UNMATCHED 55cf60e8-f240-4c89-827e-b81dd99124a0 SRP001643 Reference genome for Human Microbiome Project Lachnospiraceae_bacterium_6_1_37FAA_ltp_HMPREF0490_WGS_Monoisolate PRJNA41967 15x fragment; 30x physical paired SRS002794 454-3536 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGTCGAC 2 forward Application Read Forward 12 454 GS FLX Titanium 2009-12-29 13:22:12.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Assembly gssr_id 16693.3 lsid BROAD:SEQUENCING_SAMPLE:16693.3 material_type Genomic DNA project G1756 work_request 20447 SRX008340 256.WR19307.Solexa-6410.42GVCAAXX090905.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000108 NA18520 Solexa-6410 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24670.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW8 BI Project Name G1475 BI Work Request ID 19307 SRX008341 20238.WR20737.454-3717.723101100222.S.UNMATCHED 702d2acf-4427-4b5a-89a7-c31bc8095d66 SRP002074 Puccinia_striiformis_2K041_Yr9_ltp_CQM_WGS_Monoisolate PRJNA41279 454 sequencing of Puccinia striiformis 2K041-Yr9 via random selection SRS183320 454-3717 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGTAATC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-02-23 14:52:54.0 N/A 454BaseCaller 2.3 analysis_type Standard 454 Base Calling and Alignment gssr_id 41223.1 lsid BROAD:SEQUENCING_SAMPLE:41223.1 material_type Genomic DNA project G2495 work_request 20737 SRX008342 20180.WR20710.454-3632.723102100205.S.UNMATCHED 8c5c699d-761e-429a-8136-e286e8f48d86 SRP001857 Reference Genome for Human Microbiome Project Eggerthella_sp_1_3_56FAA_ltp_HMPREF1023_WGS_Monoisolate PRJNA40023 low coverage on 454 SRS010193 454-3632 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTGAC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-02-06 19:18:55.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38498.1 lsid BROAD:SEQUENCING_SAMPLE:38498.1 material_type Genomic DNA project G2462 work_request 20710 SRX008533 256.WR16831.Solexa-5115.42GUHAAXX090908.P SRP000031 1000Genomes Project Pilot 1 Standard Shear and Sequence on Illumina SRS000142 NA18856 Solexa-5115 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24678.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWG BI Project Name G1483 BI Work Request ID 16831 SRX008534 1517030.WR33953.Pond-206573.D1JMAACXX121226.P 7e496ad3-6b77-41af-81c1-a4f73d3e680b SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350896 SAMN01091006 HG03716 Pond-206573 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-05 13:01:16.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274210.0 lsid broadinstitute.org:bsp.prod.sample:3QRO4 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H116 sample_id SM-3QRO4 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX008535 21366.WR20693.454-3625.723171100128.S.UNMATCHED 1aa1b26d-6863-4173-ac50-1fc13016e274 SRP001863 Reference Genome for Human Microbiome Project Aggregatibacter_aphrophilus_F0387_ltp_HMPREF9335_WGS_Monoisolate PRJNA40689 low coverage on 454 SRS010199 454-3625 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCAACCGGC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-02-26 11:46:20.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 40171.2 lsid BROAD:SEQUENCING_SAMPLE:40171.2 material_type Genomic DNA project G2855 work_request 20693 SRX008536 256.WR19325.Solexa-5400.42GUHAAXX090908.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000050 Solexa-5400 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25088.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AN BI Project Name G1510 BI Work Request ID 19325 SRX008537 12055.WR17633.454-1791.647946081224.S.UNMATCHED 74d8a5a3-fa18-4e7d-8fab-b8f24254ed9c SRP001866 Reference genome for Human Microbiome Project Dorea_sp_4_1_36FAA_ltp_HMPREF0333_WGS_Monoisolate PRJNA39557 15x fragment; 30x physical paired SRS002801 454-1791 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGGTTGTC 2 forward Application Read Forward 13 454 GS FLX 2009-02-24 11:42:11.0 N/A 454BaseCaller 2.0.00.17 gssr_id 16674.1 lsid BROAD:SEQUENCING_SAMPLE:16674.1 material_type Genomic DNA project G1752 work_request 17633 SRX008538 12055.WR17635.454-1901.648110081118.P.UNMATCHED fae5e6dd-fbff-48c9-bef5-8eadeb2df40a SRP001866 Reference genome for Human Microbiome Project Dorea_sp_4_1_36FAA_ltp_HMPREF0333_WGS_Monoisolate PRJNA39557 15x fragment; 30x physical paired SRS002801 454-1901 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ATTCGTAC 2 forward Application Read Forward 13 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX 2009-02-17 14:55:18.0 N/A 454BaseCaller 2.0.00.17 gssr_id 16674.2 lsid BROAD:SEQUENCING_SAMPLE:16674.2 material_type Genomic DNA project G1752 work_request 17635 SRX008539 256.WR19310.Solexa-5070.42GUHAAXX090908.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000103 NA18510 Solexa-5070 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24675.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWD BI Project Name G1480 BI Work Request ID 19310 SRX008540 12055.WR20685.454-3621.721851100204.S.UNMATCHED 7094f6c0-c056-40de-84e1-3b229497351b SRP001866 Reference genome for Human Microbiome Project Dorea_sp_4_1_36FAA_ltp_HMPREF0333_WGS_Monoisolate PRJNA39557 low coverage on 454 SRS010202 454-3621 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCTCTC 2 forward Application Read Forward 11 454 GS FLX Titanium 2010-02-05 23:06:58.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 36689.1 lsid BROAD:SEQUENCING_SAMPLE:36689.1 material_type Genomic DNA project G2227 work_request 20685 SRX008798 256.WR19326.Solexa-5403.42GW0AAXX090911.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000056 Solexa-5403 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25091.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AQ BI Project Name G1513 BI Work Request ID 19326 SRX008799 256.WR19328.Solexa-5414.42GW0AAXX090911.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000166 NA18964 Solexa-5414 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25102.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B2 BI Project Name G1524 BI Work Request ID 19328 SRX010844 256.WR19316.Solexa-6423.42H72AAXX090915.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000161 NA18953 Solexa-6423 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24683.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWL BI Project Name G1488 BI Work Request ID 19316 SRX010847 256.WR19314.Solexa-6419.42H72AAXX090915.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000202 NA19172 Solexa-6419 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24679.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWH BI Project Name G1484 BI Work Request ID 19314 SRX010861 256.WR19338.Solexa-5416.42HH8AAXX090917.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000035 Solexa-5416 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25104.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B4 BI Project Name G1526 BI Work Request ID 19338 SRX010862 12068.WR20698.454-3626.723171100128.S.UNMATCHED 2549b290-30d9-4b36-ae57-77894b14be38 SRP001862 Reference genome for the Human Microbiome Project Clostridium_sp_1_1_41A1FAA_ltp_HMPREF0977_WGS_Monoisolate PRJNA39361 low coverage on 454 SRS010198 454-3626 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCCTTCCAC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-02-26 11:46:20.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 16670.1 lsid BROAD:SEQUENCING_SAMPLE:16670.1 material_type Genomic DNA project G2244 work_request 20698 SRX010863 1517030.WR33953.Pond-206573.D1K99ACXX130102.P f8157c55-7318-4763-abf1-a6aa773bdc96 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350896 SAMN01091006 HG03716 Pond-206573 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-11 05:31:50.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274210.0 lsid broadinstitute.org:bsp.prod.sample:3QRO4 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H116 sample_id SM-3QRO4 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX010864 256.WR19339.Solexa-5418.42HH8AAXX090917.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000036 Solexa-5418 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25106.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B6 BI Project Name G1528 BI Work Request ID 19339 SRX010865 20174.WR20715.454-3634.723171100128.S.UNMATCHED d9cd749e-e3a8-4d50-a9b7-2788b0d93c60 SRP001878 Reference sequence for Human Microbiome Project Bacteroides_eggerthii_1_2_48FAA_ltp_HMPREF1016_WGS_Monoisolate PRJNA40009 low coverage on 454 SRS010315 454-3634 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACGGCTC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-02-26 11:46:20.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38479.1 lsid BROAD:SEQUENCING_SAMPLE:38479.1 material_type Genomic DNA project G2456 work_request 20715 SRX010866 21625.WR20689.454-3624.723415100115.S.UNMATCHED 86527859-f0d8-4008-8556-2912ced67b90 SRP001749 Reference Genome for Human Microbiome Project Johnsonella_ignava_ATCC_51276_ltp_HMPREF9333_WGS_Monoisolate PRJNA40693 low coverage on 454 SRS009941 454-3624 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ATCTTAC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-01-17 01:26:03.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Assembly gssr_id 38432.1 lsid BROAD:SEQUENCING_SAMPLE:38432.1 material_type Genomic DNA project G2880 work_request 20689 SRX010867 20182.WR20699.454-3627.723415100115.S.UNMATCHED 5f6ca3bc-898a-4d45-a6bf-af5ac633f79f SRP001748 Reference Genome for Human Microbiome Project Lachnospiraceae_bacterium_3_1_46FAA_ltp_HMPREF1025_WGS_Monoisolate PRJNA40027 low coverage on 454 SRS009927 454-3627 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACCAGC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-01-17 01:26:03.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38499.1 lsid BROAD:SEQUENCING_SAMPLE:38499.1 material_type Genomic DNA project G2464 work_request 20699 SRX010873 12040.WR20294.454-3494.723442091207.S.UNMATCHED 37af488d-1393-4a6a-b6f6-a8057664531d SRP001448 Ajellomyces dermatitidis ATCC 26199 genome sequencing ltp_BDFG_WGS_Monoisolate PRJNA39263 Low coverage of genome on 454 SRS007467 454-3494 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGTAATC 2 forward Application Read Forward 14 454 GS FLX Titanium 2009-12-24 22:26:14.0 N/A 454BaseCaller 2.3 analysis_type Standard 454 Base Calling and Alignment gssr_id 36128.2 lsid BROAD:SEQUENCING_SAMPLE:36128.2 material_type Genomic DNA project G2259 work_request 20294 SRX011346 12068.WR20704.454-3662.727844100408.P.UNMATCHED 8fe616f2-630f-4052-95ad-ad024a6febaa SRP001862 Reference genome for the Human Microbiome Project Clostridium_sp_1_1_41A1FAA_ltp_HMPREF0977_WGS_Monoisolate PRJNA39361 low coverage on 454 SRS010198 454-3662 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AAGGCAC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-04-13 14:27:47.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 16670.2 lsid BROAD:SEQUENCING_SAMPLE:16670.2 material_type Genomic DNA project G2244 work_request 20704 SRX011347 256.WR19318.Solexa-6425.42H2UAAXX090924.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000146 NA18871 Solexa-6425 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24685.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWN BI Project Name G1490 BI Work Request ID 19318 SRX011348 23037.WR21244.454-4237.727844100408.P.UNMATCHED 5d0664e7-6ac5-483a-ac3d-b7c2fc7f3223 SRP001776 Reference genome for Human Microbiome Project Fusobacterium_nucleatum_subsp_animalis_11_3_2_ltp_HMPREF0401_WGS_Monoisolate PRJNA39559 low coverage on 454 SRS002800 454-4237 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGAATAC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-04-13 14:27:47.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 36688.2 lsid BROAD:SEQUENCING_SAMPLE:36688.2 material_type Genomic DNA project G2228 work_request 21244 SRX011349 256.WR19340.Solexa-5419.42H2UAAXX090924.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000041 Solexa-5419 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25107.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B7 BI Project Name G1529 BI Work Request ID 19340 SRX011350 20238.WR21393.454-4300.729181100428.S.UNMATCHED 15d06be0-3508-4d96-987b-96640966e466 SRP002074 Puccinia_striiformis_2K041_Yr9_ltp_CQM_WGS_Monoisolate PRJNA41279 454 sequencing of Puccinia striiformis 2K041-Yr9 via random selection SRS183320 454-4300 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCGTTATC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-04-30 09:05:50.0 N/A 454BaseCaller 2.3 analysis_type Standard 454 Base Calling and Alignment gssr_id 43470.1 lsid BROAD:SEQUENCING_SAMPLE:43470.1 material_type Genomic DNA project G2495 sample_type spores work_request 21393 SRX011351 256.WR19329.Solexa-5415.42H2UAAXX090924.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000049 Solexa-5415 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25103.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B3 BI Project Name G1525 BI Work Request ID 19329 SRX011352 173553.WR21186.454-4154.729794100415.S.UNMATCHED 7a4726d3-598f-4e98-96a9-d0d8deeebc4a SRP006102 15 samples from Beaufort Sea uncultured phage metagenome marine_WGS_Environment PRJNA50457 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS182628 454-4154 WGS METAGENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CGCAAC 2 forward Application Read Forward 11 454 GS FLX Titanium 2010-04-17 19:17:48.0 N/A 454BaseCaller 2.3 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 46528.1 lsid BROAD:SEQUENCING_SAMPLE:46528.1 material_type Genomic DNA project G3264 work_request 21186 SRX011353 256.WR19322.Solexa-5411.42H2UAAXX090924.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000031 Solexa-5411 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25099.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AY BI Project Name G1521 BI Work Request ID 19322 SRX011354 256.WR19308.Solexa-5111.42H65AAXX090924.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000095 NA18498 Solexa-5111 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24674.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWC BI Project Name G1479 BI Work Request ID 19308 SRX011355 1465362.WR35092.Pond-220679.D1NYAACXX130222.P 797af9b5-11a6-4629-97ab-ab8f23b2463a SRP015237 PRJNA173703 Exome sequencing of ESN Esan in Nigeria HapMap population Homo_sapiens_lcl_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350781 SAMN01090891 HG03196 Pond-220679 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-03 12:29:55.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288812.0 lsid broadinstitute.org:bsp.prod.sample:3VEFF material_type DNA:DNA Somatic product_order PDO-209 project C959 research_project RP-21 root_sample_id SM-3O4XP sample_id SM-3VEFF target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35092 SRX011356 187208.WR22613.Solexa-36125.61R3KAAXX100727.P cbad31d0-8d8a-41cf-af2b-d20195398f6f SRP005598 PRJNA61177 Scope hybrid selection Plasmodium_falciparum_3D7_WGS_Monoisolate Paired end adaptered PCR-product of Whole Genome Amplified (WGA) 200-350 bp library from P. falciparum 3D7 DNA SRS183248 PRJNA61177.P_WGA Solexa-36125 WGS GENOMIC Hybrid Selection 143 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II 2010-08-03 17:20:36.0 N/A Rig Software 2.8.96 2010-08-03 17:20:20.0 N/A GAPipeline 1.8.0 analysis_type WGSWithRef gssr_id 63534.0 lsid BROAD:SEQUENCING_SAMPLE:63534.0 material_type New Tech Library project C343 work_request 22613 SRX011357 187208.WR22613.Solexa-36125.6256GAAXX100813.P 1a88127d-97d0-4315-aca7-453d527df7e2 SRP005598 PRJNA61177 Scope hybrid selection Plasmodium_falciparum_3D7_WGS_Monoisolate Paired end adaptered PCR-product of Whole Genome Amplified (WGA) 200-350 bp library from P. falciparum 3D7 DNA SRS183248 PRJNA61177.P_WGA Solexa-36125 WGS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II 2010-08-21 12:14:16.0 N/A Rig Software 2.8.96 2010-08-21 12:14:17.0 N/A GAPipeline 1.8.0 analysis_type WGSWithRef gssr_id 63534.0 lsid BROAD:SEQUENCING_SAMPLE:63534.0 material_type New Tech Library project C343 work_request 22613 SRX011358 256.WR19313.Solexa-5114.42H65AAXX090924.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000093 NA18486 Solexa-5114 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24677.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWF BI Project Name G1483 BI Work Request ID 19313 SRX011359 22816.WR21247.454-4166.729839100416.S.UNMATCHED 3e733315-5f33-456a-a744-91ce6ed6d56f SRP001680 Reference genome for the Human Microbiome Project Fusobacterium_nucleatum_subsp_animalis_4_8_ltp_HMPREF0409_WGS_Monoisolate PRJNA32481 low coverage on 454 SRS072640 454-4166 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCTCTC 2 forward Application Read Forward 11 454 GS FLX Titanium 2010-04-19 04:59:29.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 37277.1 lsid BROAD:SEQUENCING_SAMPLE:37277.1 material_type Genomic DNA project G2852 work_request 21247 SRX011360 22816.WR21248.454-4239.729839100416.P.UNMATCHED 51e2144b-6588-4a08-b0e6-5f11c46f9dfd SRP001680 Reference genome for the Human Microbiome Project Fusobacterium_nucleatum_subsp_animalis_4_8_ltp_HMPREF0409_WGS_Monoisolate PRJNA32481 low coverage on 454 SRS072640 454-4239 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCTCTC 2 forward Application Read Forward 11 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-04-19 04:59:29.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 37277.2 lsid BROAD:SEQUENCING_SAMPLE:37277.2 material_type Genomic DNA project G2852 work_request 21248 SRX011361 28388.WR21615.454-4578.730961100520.P.UNMATCHED a6602a5c-1240-4498-b2aa-362e323fd8a2 SRP002712 Reference genome for the Human Microbiome Project Clostridium_clostridioforme_2_1_49FAA_ltp_HMPREF9467_WGS_Monoisolate PRJNA46389 low coverage of genome on 454 SRS084539 454-4578 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGTAATC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-05-24 19:40:06.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 46614.2 lsid BROAD:SEQUENCING_SAMPLE:46614.2 material_type Genomic DNA project G4042 work_request 21615 SRX011362 1465362.WR35092.Pond-220679.C1LY6ACXX130227.P e3b748ec-4a1a-4eea-b9a3-b4b1c1883354 SRP015237 PRJNA173703 Exome sequencing of ESN Esan in Nigeria HapMap population Homo_sapiens_lcl_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350781 SAMN01090891 HG03196 Pond-220679 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-07 16:55:32.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288812.0 lsid broadinstitute.org:bsp.prod.sample:3VEFF material_type DNA:DNA Somatic product_order PDO-209 project C959 research_project RP-21 root_sample_id SM-3O4XP sample_id SM-3VEFF target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35092 SRX011363 256.WR19336.Solexa-5401.42HBMAAXX090921.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000062 Solexa-5401 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25089.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AO BI Project Name G1511 BI Work Request ID 19336 SRX011364 20189.WR21659.454-4373.730961100520.S.UNMATCHED 491b292a-f8b9-4bcf-860e-90412ae5488c SRP002540 Reference Genome for the Human Microbiome Project Tannerella_sp_6_1_58FAA_CT1_ltp_HMPREF1033_WGS_Monoisolate PRJNA40043 low coverage of genome on 454 SRS074142 454-4373 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACACCGGTC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-05-24 19:40:06.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38481.2 lsid BROAD:SEQUENCING_SAMPLE:38481.2 material_type Genomic DNA project G2471 work_request 21659 SRX011365 256.WR19345.Solexa-5404.42HBMAAXX090921.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000042 NA11830 Solexa-5404 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25092.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AR BI Project Name G1514 BI Work Request ID 19345 SRX011366 1465362.WR35091.Pond-220584.D1RYEACXX130302.P 1e7a6984-2cae-4187-9f9d-1643146f2c47 SRP015237 PRJNA173703 Exome sequencing of ESN Esan in Nigeria HapMap population Homo_sapiens_lcl_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350784 SAMN01090894 HG03199 Pond-220584 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-03-10 07:03:06.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 288717.0 lsid broadinstitute.org:bsp.prod.sample:3VECP material_type DNA:DNA Somatic product_order PDO-209 project C959 research_project RP-21 root_sample_id SM-3O4YU sample_id SM-3VECP target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 35091 SRX011367 256.WR19327.Solexa-5406.42HBMAAXX090921.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000043 Solexa-5406 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25094.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AT BI Project Name G1516 BI Work Request ID 19327 SRX011368 24311.WR21664.454-4588.730961100520.P.UNMATCHED dc564f4a-f4af-4bba-8926-848b30596474 SRP002536 Reference genome for Human Microbiome Project Bacillus_sp_7_6_55CFAA_CT2_ltp_HMPREF1014_WGS_Monoisolate PRJNA40005 low coverage of genome on 454 SRS074132 454-4588 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAATCTC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-05-24 19:40:06.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38485.2 lsid BROAD:SEQUENCING_SAMPLE:38485.2 material_type Genomic DNA project G3286 work_request 21664 SRX011369 256.WR19305.Solexa-5105.42HLCAAXX090922.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000094 NA18489 Solexa-5105 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24668.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW6 BI Project Name G1473 BI Work Request ID 19305 SRX011370 256.WR19315.Solexa-5119.42HLCAAXX090922.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000096 NA18499 Solexa-5119 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24682.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWK BI Project Name G1487 BI Work Request ID 19315 SRX011371 256.WR19321.Solexa-5124.42HLCAAXX090922.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000105 NA18516 Solexa-5124 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24687.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWP BI Project Name G1492 BI Work Request ID 19321 SRX011372 256.WR19335.Solexa-5125.42HLCAAXX090922.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000107 NA18519 Solexa-5125 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24688.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWQ BI Project Name G1493 BI Work Request ID 19335 SRX011373 22795.WR21657.454-4372.730997100524.S.UNMATCHED ae147cf4-2cb4-4749-8687-843a7c077ad2 SRP001624 Reference genome for the Human Microbiome Project Fusobacterium_ulcerans_12_1B_12_1B_ltp_HMPREF0402_WGS_Monoisolate PRJNA32471 low coverage of genome on 454 SRS107454 454-4372 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACTTGC 2 forward Application Read Forward 11 454 GS FLX Titanium 2010-07-23 15:51:10.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 39753.1 lsid BROAD:SEQUENCING_SAMPLE:39753.1 material_type Genomic DNA project G2853 work_request 21657 SRX012733 26642.WR21620.454-4365.734102100507.S.UNMATCHED f12568ce-6986-46de-b16a-1aadb9048122 SRP002517 Reference genome for the Human Microbiome Project Dorea_formicigenerans_4_6_53AFAA_ltp_HMPREF9457_WGS_Monoisolate PRJNA46407 low coverage of genome on 454 SRS074011 454-4365 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGTTGGC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-05-11 00:57:40.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 46602.1 lsid BROAD:SEQUENCING_SAMPLE:46602.1 material_type Genomic DNA project G3468 work_request 21620 SRX012734 20184.WR21254.454-4242.734103100507.P.UNMATCHED 04a8a8c5-0749-43c1-a64d-680a45749872 SRP002501 Reference Genome for Human Microbiome Project Lactobacillus_sp_7_1_47FAA_ltp_HMPREF1027_WGS_Monoisolate PRJNA40031 low coverage on 454 SRS073316 454-4242 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AAGGTGC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-05-12 18:30:35.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38486.1 lsid BROAD:SEQUENCING_SAMPLE:38486.1 material_type Genomic DNA project G2466 work_request 21254 SRX012735 20185.WR21256.454-4243.734103100507.P.UNMATCHED 1ea619ed-191b-45d0-94ef-f127a2c5de5e SRP002508 Reference Genome for Human Microbiome Project Neisseria_sp_GT4A_CT1_ltp_HMPREF1028_WGS_Monoisolate PRJNA40033 low coverage on 454 SRS073320 454-4243 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ATCTTAC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-05-12 18:30:35.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38493.1 lsid BROAD:SEQUENCING_SAMPLE:38493.1 material_type Genomic DNA project G2467 work_request 21256 SRX012736 1517030.WR33953.Pond-206578.C1EE6ACXX121228.P 3da6ab8f-2957-4526-9785-d481a26ed413 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350897 SAMN01091007 HG03714 Pond-206578 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-06 04:01:41.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274215.0 lsid broadinstitute.org:bsp.prod.sample:3QRO9 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H114 sample_id SM-3QRO9 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX012737 1517030.WR33953.Pond-206578.D1JMAACXX121226.P 9cb5d282-5798-4cac-9466-8b15193d9b56 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350897 SAMN01091007 HG03714 Pond-206578 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-05 13:01:16.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274215.0 lsid broadinstitute.org:bsp.prod.sample:3QRO9 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H114 sample_id SM-3QRO9 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX012738 20178.WR21258.454-4244.734103100507.P.UNMATCHED 59fa8c4c-43a6-46cf-8d05-8ce0d6188225 SRP002494 Reference genome for Human Microbiome Project Clostridium_sp_7_3_54FAA_ltp_HMPREF1020_WGS_Monoisolate PRJNA40017 low coverage on 454 SRS073310 454-4244 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCAACCGGC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-05-12 18:30:35.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38489.1 lsid BROAD:SEQUENCING_SAMPLE:38489.1 material_type Genomic DNA project G2460 work_request 21258 SRX012739 20181.WR21260.454-4245.734103100507.P.UNMATCHED aceba56f-80da-4abc-9295-fbe86a288e0f SRP002506 Reference Genome for Human Microbiome Project Klebsiella_sp_4_1_44FAA_ltp_HMPREF1024_WGS_Monoisolate PRJNA40025 low coverage on 454 SRS073318 454-4245 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCCTTCCAC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-05-12 18:30:35.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38495.1 lsid BROAD:SEQUENCING_SAMPLE:38495.1 material_type Genomic DNA project G2463 work_request 21260 SRX012740 256.WR20138.Solexa-15347.42TE2AAXX091105.S SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000054 Solexa-15347 WGS GENOMIC RANDOM 76 0 forward Application Read Forward 1 Illumina Genome Analyzer II BI GSSR Sample ID 40170.0 BI GSSR Sample LSID broadinstitute.org:bsp.prod.sample:WOHA BI Project Name G1530 BI Work Request ID 20138 SRX012741 20186.WR21662.454-4587.731026100602.P.UNMATCHED ea88b6a1-6f07-4e47-bef9-427bfb004f6f SRP002629 Reference Genome for Human Microbiome Project Pseudomonas_sp_2_1_26_ltp_HMPREF1030_WGS_Monoisolate PRJNA40037 low coverage of genome on 454 SRS084176 454-4587 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCTTGGC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-07-23 14:55:15.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 48777.2 lsid BROAD:SEQUENCING_SAMPLE:48777.2 material_type Genomic DNA project G2468 work_request 21662 SRX012742 256.WR20000.Solexa-14734.42KCJAAXX091001.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000165 NA18961 Solexa-14734 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 30871.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:O78R BI Project Name G1527 BI Work Request ID 20000 SRX012743 256.WR20002.Solexa-14735.42KCJAAXX091001.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000141 NA18853 Solexa-14735 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 31459.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:ORO2 BI Project Name G1481 BI Work Request ID 20002 SRX012744 24309.WR21271.454-4246.734103100507.P.UNMATCHED be8bf25b-e7f4-4721-a257-8f37dc57722a SRP002492 Reference genome for Human Microbiome Project Bacillus_sp_BT1B_CT2_ltp_HMPREF1012_WGS_Monoisolate PRJNA40001 low coverage on 454 SRS073305 454-4246 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACCAGC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-05-12 18:30:35.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38483.1 lsid BROAD:SEQUENCING_SAMPLE:38483.1 material_type Genomic DNA project G3284 work_request 21271 SRX012745 12077.WR21250.454-4240.734384100427.P.UNMATCHED 246c0ddf-c431-4795-9ebe-3e1893424d50 SRP002521 Reference genome for the Human Microbiome Project Bacteroides_sp_4_1_36_ltp_HMPREF1007_WGS_Monoisolate PRJNA39357 low coverage on 454 SRS074027 454-4240 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ATACCAC 2 forward Application Read Forward 12 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-04-29 08:36:33.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 16663.1 lsid BROAD:SEQUENCING_SAMPLE:16663.1 material_type Genomic DNA project G2253 work_request 21250 SRX012746 20172.WR21252.454-4241.734384100427.P.UNMATCHED 13928b55-5122-4541-b677-fec66562d957 SRP002520 Reference genome for Human Microbiome Project Anaerostipes_sp_3_2_56FAA_ltp_HMPREF1011_WGS_Monoisolate PRJNA39999 low coverage on 454 SRS074029 454-4241 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGGAAGC 2 forward Application Read Forward 14 3 pe_linker Technical Read Linker GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA 4 reverse Application Read Reverse 454 GS FLX Titanium 2010-04-29 08:36:33.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38488.1 lsid BROAD:SEQUENCING_SAMPLE:38488.1 material_type Genomic DNA project G2454 work_request 21252 SRX012747 1517030.WR33953.Pond-206578.D1K99ACXX130102.P 28937b6d-7365-470b-b4a4-15b9f26cb60f SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350897 SAMN01091007 HG03714 Pond-206578 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-11 05:31:50.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274215.0 lsid broadinstitute.org:bsp.prod.sample:3QRO9 material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H114 sample_id SM-3QRO9 target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX012748 20172.WR21251.454-4168.734405100420.S.UNMATCHED 5a0bafba-fdc7-430c-ab19-cb253f7a35e7 SRP002520 Reference genome for Human Microbiome Project Anaerostipes_sp_3_2_56FAA_ltp_HMPREF1011_WGS_Monoisolate PRJNA39999 low coverage on 454 SRS074029 454-4168 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ATACCAC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-04-22 00:58:28.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38488.2 lsid BROAD:SEQUENCING_SAMPLE:38488.2 material_type Genomic DNA project G2454 work_request 21251 SRX012749 20184.WR21253.454-4169.734405100420.S.UNMATCHED 98654633-8524-419f-8989-4fd4ab54ad76 SRP002501 Reference Genome for Human Microbiome Project Lactobacillus_sp_7_1_47FAA_ltp_HMPREF1027_WGS_Monoisolate PRJNA40031 low coverage on 454 SRS073316 454-4169 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ATCTTAC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-04-22 00:58:28.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38486.2 lsid BROAD:SEQUENCING_SAMPLE:38486.2 material_type Genomic DNA project G2466 work_request 21253 SRX012750 20181.WR21259.454-4172.734405100420.S.UNMATCHED 3cebaaba-f9ee-4625-82ac-5c930570f510 SRP002506 Reference Genome for Human Microbiome Project Klebsiella_sp_4_1_44FAA_ltp_HMPREF1024_WGS_Monoisolate PRJNA40025 low coverage on 454 SRS073318 454-4172 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACCAGC 2 forward Application Read Forward 12 454 GS FLX Titanium 2010-04-22 00:58:28.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38495.2 lsid BROAD:SEQUENCING_SAMPLE:38495.2 material_type Genomic DNA project G2463 work_request 21259 SRX012751 256.WR20139.Solexa-15346.42RU3AAXX091105.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000065 NA12155 Solexa-15346 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 40169.0 BI GSSR Sample LSID broadinstitute.org:bsp.prod.sample:WOH9 BI Project Name G1512 BI Work Request ID 20139 SRX012752 12057.WR21245.454-4165.734441100428.S.UNMATCHED ca991bc2-eac8-4d02-9e3b-7807a90e9d49 SRP002518 Reference genome for the Human Microbiome Project Phascolarctobacterium_sp_3_1syn4_ltp_HMPREF1001_WGS_Monoisolate PRJNA39409 low coverage on 454 SRS074016 454-4165 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGAATAC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-04-29 14:56:18.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Assembly gssr_id 16684.1 lsid BROAD:SEQUENCING_SAMPLE:16684.1 material_type Genomic DNA project G2229 work_request 21245 SRX012753 256.WR19313.Solexa-5114.42T4LAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000093 NA18486 Solexa-5114 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24677.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWF BI Project Name G1483 BI Work Request ID 19313 SRX012754 256.WR19326.Solexa-5403.42T4LAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000056 Solexa-5403 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25091.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AQ BI Project Name G1513 BI Work Request ID 19326 SRX012756 12077.WR21249.454-4167.734441100428.S.UNMATCHED c2c01a4f-3079-4669-818a-0687ef1e6325 SRP002521 Reference genome for the Human Microbiome Project Bacteroides_sp_4_1_36_ltp_HMPREF1007_WGS_Monoisolate PRJNA39357 low coverage on 454 SRS074027 454-4167 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCGGAAGC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-04-29 14:56:18.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 16663.2 lsid BROAD:SEQUENCING_SAMPLE:16663.2 material_type Genomic DNA project G2253 work_request 21249 SRX012757 175982.WR24672.454-6893.734480110309.S.UNMATCHED aa0db33d-1dbe-497a-a841-daf7a2713609 SRP006084 Reference genome for the Human Microbiome Project Bacteroides_oleiciplenus_YIT_12058_ltp_HMPREF9447_WGS_Monoisolate PRJNA46377 low coverage of genome on 454 SRS179086 454-6893 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode CCAACCGGC 2 forward Application Read Forward 14 454 GS FLX Titanium 2011-04-12 20:30:49.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 53808.1 lsid BROAD:SEQUENCING_SAMPLE:53808.1 material_type Genomic DNA project G10711 work_request 24672 SRX012758 256.WR19343.Solexa-5399.42NGVAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000164 NA18960 Solexa-5399 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25087.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AM BI Project Name G1509 BI Work Request ID 19343 SRX012759 1517030.WR33953.Pond-206579.C1EE6ACXX121228.P e653f4d2-c094-4e26-8d16-b4377c7460b9 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350905 SAMN01091015 HG03729 Pond-206579 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-06 04:01:41.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274216.0 lsid broadinstitute.org:bsp.prod.sample:3QROA material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H11B sample_id SM-3QROA target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX012760 256.WR19342.Solexa-5446.42NGVAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000037 Solexa-5446 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25086.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3AL BI Project Name G1508 BI Work Request ID 19342 SRX012761 12063.WR20053.454-3355.734480110309.S.UNMATCHED 38f12158-18b9-4ad7-9a1c-99d944d932eb SRP001283 Reference genome for the Human Microbiome Project Lachnospiraceae_bacterium_7_1_58FAA_ltp_HMPREF0995_WGS_Monoisolate PRJNA39397 Low coverage on 454 SRS006273 454-3355 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2011-04-12 20:30:49.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 36685.1 lsid BROAD:SEQUENCING_SAMPLE:36685.1 material_type Genomic DNA project G2239 work_request 20053 SRX012762 176108.WR24682.454-6898.734480110309.S.UNMATCHED 9fafa8ab-e18b-4d71-b774-7049e5ec777e SRP006064 Reference genome for the Human Microbiome Project Fusobacterium_necrophorum_subsp_funduliforme_1_1_36S_ltp_HMPREF9466_WGS_Monoisolate PRJNA46417 low coverage of genome on 454 SRS178978 454-6898 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAATCTC 2 forward Application Read Forward 12 454 GS FLX Titanium 2011-04-12 20:30:49.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 46611.1 lsid BROAD:SEQUENCING_SAMPLE:46611.1 material_type Genomic DNA project G10708 work_request 24682 SRX012763 256.WR20139.Solexa-15346.42NGVAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000065 NA12155 Solexa-15346 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 40169.0 BI GSSR Sample LSID broadinstitute.org:bsp.prod.sample:WOH9 BI Project Name G1512 BI Work Request ID 20139 SRX012764 20181.WR21259.454-4172.734480110309.S.UNMATCHED ee38d4c7-fff6-4c25-8705-994e67f2289b SRP002506 Reference Genome for Human Microbiome Project Klebsiella_sp_4_1_44FAA_ltp_HMPREF1024_WGS_Monoisolate PRJNA40025 low coverage on 454 SRS073318 454-4172 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACCAGC 2 forward Application Read Forward 12 454 GS FLX Titanium 2011-04-12 20:30:49.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Alignment and Assembly gssr_id 38495.2 lsid BROAD:SEQUENCING_SAMPLE:38495.2 material_type Genomic DNA project G2463 work_request 21259 SRX012765 173560.WR23266.454-4298.736703100830.S.UNMATCHED aca3f80f-fd45-4ea1-b4f2-3dc03fb44458 SRP006067 California Bight SPOT and Biofilm Marine Metagenome WGS_Environment PRJNA50471 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS178981 454-4298 WGS METAGENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCAGGTTC 2 forward Application Read Forward 14 454 GS FLX Titanium 2010-08-31 05:14:08.0 N/A 454BaseCaller 2.3 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 46549.1 lsid BROAD:SEQUENCING_SAMPLE:46549.1 material_type Genomic DNA project G3396 work_request 23266 SRX012766 256.WR19328.Solexa-5414.42P1DAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000166 NA18964 Solexa-5414 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 25102.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:G3B2 BI Project Name G1524 BI Work Request ID 19328 SRX012767 256.WR19307.Solexa-6410.42T4LAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000108 NA18520 Solexa-6410 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24670.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBW8 BI Project Name G1475 BI Work Request ID 19307 SRX012768 173605.WR22801.454-4986.738349100804.S.UNMATCHED e0df17c1-6108-4733-ae81-6815134cb0d7 SRP006103 Virome Lake227 Freshwater Metagenome WGS_Environment PRJNA52331 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS182629 454-4986 WGS METAGENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode ACCTGAAC 2 forward Application Read Forward 13 454 GS FLX Titanium 2010-08-05 20:19:33.0 N/A 454BaseCaller 2.3 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 62460.1 lsid BROAD:SEQUENCING_SAMPLE:62460.1 material_type Genomic DNA project G6465 work_request 22801 SRX012769 12045.WR19797.454-5537.742872110118.S.UNMATCHED 31882444-c24c-4963-82fc-5b918f3d349d SRP003292 Reference genome for the Human Microbiome Project Rothia_mucilaginosa_M508_ltp_HMPREF0737_WGS_Monoisolate PRJNA38789 low coverage of genome on 454 SRS107457 454-5537 WGS GENOMIC RANDOM 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TCCGTCCGC 2 forward Application Read Forward 14 454 GS FLX Titanium 2011-01-19 10:24:02.0 N/A 454BaseCaller 2.3 analysis_type Bacterial 454 Assembly gssr_id 28791.1 lsid BROAD:SEQUENCING_SAMPLE:28791.1 material_type Genomic DNA project G2234 sample_type sputum work_request 19797 SRX012770 256.WR20138.Solexa-15347.42T4LAAXX091101.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000054 Solexa-15347 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 40170.0 BI GSSR Sample LSID broadinstitute.org:bsp.prod.sample:WOHA BI Project Name G1530 BI Work Request ID 20138 SRX014901 256.WR19313.Solexa-5114.612E0AAXX091211.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000093 NA18486 Solexa-5114 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 24677.0 BI GSSR Sample LSID broad.mit.edu:bsp.prod.sample:FBWF BI Project Name G1483 BI Work Request ID 19313 SRX014902 173546.WR19006.454-2781.713432090409.S.UNMATCHED 7c78aa6d-6354-41f0-af20-80dac4e7d730 SRP005834 Prochlorococcus phage P RSP2 genome sequencing project ltp_PRRG_WGS_Monoisolate PRJNA47881 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS183399 454-2781 WGS GENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TATTCGTC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-04-10 02:45:36.0 N/A 454BaseCaller 2.0.00.22 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 32999.1 lsid BROAD:SEQUENCING_SAMPLE:32999.1 material_type Viral cDNA project G2086 work_request 19006 SRX014903 256.WR20138.Solexa-15347.616JPAAXX091210.P SRP000031 1000Genomes Project Pilot 1 Low Coverage WGS Sequencing on a 1000 Genomes allocated sample SRS000054 Solexa-15347 WGS GENOMIC RANDOM 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina Genome Analyzer II BI GSSR Sample ID 40170.0 BI GSSR Sample LSID broadinstitute.org:bsp.prod.sample:WOHA BI Project Name G1530 BI Work Request ID 20138 SRX014904 173544.WR19009.454-2782.715236090501.S.UNMATCHED 162eafec-15d6-4e3f-baaa-ae4bb7c78820 SRP005782 Prochlorococcus phage P SSP6 genome sequencing project ltp_PRUG_WGS_Monoisolate PRJNA47877 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS183400 454-2782 WGS GENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TAGGAATC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-04 10:59:43.0 N/A 454BaseCaller 2.0.00.22 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 33001.1 lsid BROAD:SEQUENCING_SAMPLE:33001.1 material_type Viral cDNA project G2088 work_request 19009 SRX014905 173550.WR19172.454-2842.715236090501.S.UNMATCHED 2e1c2507-2a3b-4860-be4f-2a3f4d3dd71a SRP005723 Cellulophaga phage phi31 genome sequencing project WGS_Monoisolate PRJNA47889 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS172704 454-2842 WGS GENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AACCTGGC 2 forward Application Read Forward 13 454 GS FLX Titanium 2009-05-04 10:59:43.0 N/A 454BaseCaller 2.0.00.22 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 34070.1 lsid BROAD:SEQUENCING_SAMPLE:34070.1 material_type Viral cDNA project G2124 work_request 19172 SRX014906 1517030.WR33953.Pond-206595.C1EE6ACXX121228.P 4ea2e2da-8130-496d-95b6-a08e1e2d7449 SRP016106 PRJNA177426 Homo_sapiens_ITU_Indian_Telugu_in_the_UK_blood_ITU_exome_WEX_Monoisolate Illumina sequencing of Homo sapiens via hybrid selection SRS350909 SAMN01091019 HG03882 Pond-206595 WXS GENOMIC Hybrid Selection 152 0 forward Application Read Forward 1 1 reverse Application Read Reverse 77 Illumina HiSeq 2000 2013-01-06 04:01:41.0 N/A GAPipeline RTA1.15.19.5 Sequencer Application 1.6.8.6 gssr_id 274231.0 lsid broadinstitute.org:bsp.prod.sample:3QROQ material_type DNA:DNA Genomic project C1053 root_sample_id SM-3H128 sample_id SM-3QROQ target_set whole_exome_agilent_1.1_refseq_plus_3_boosters work_request 33953 SRX014907 173357.WR19973.454-3334.715641091016.S.UNMATCHED 0810ec2e-6064-4ca0-9cf8-2ea47d374700 SRP005756 Phaeocystis globosa virus 12T genome sequencing project ltp_PGAG_WGS_Monoisolate PRJNA47585 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS172811 454-3334 WGS GENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode TTCAGGTTC 2 forward Application Read Forward 14 454 GS FLX Titanium 2009-10-18 22:44:10.0 N/A 454BaseCaller 2.0.01.12 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 38895.1 lsid BROAD:SEQUENCING_SAMPLE:38895.1 material_type Genomic DNA project G2349 work_request 19973 SRX014908 169706.WR20577.454-3595.722492100111.S.UNMATCHED c23bd85c-5409-4642-a745-3a68ed12aa28 SRP005746 2 samples from Key West coral uncultured phage metagenome WGS_Environment PRJNA47469 International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology. SRS172829 454-3595 WGS METAGENOMIC PCR 0 key_sequence Technical Read Adapter TCAG 1 barcode Technical Read BarCode AGCTTC 2 forward Application Read Forward 11 454 GS FLX Titanium 2010-01-12 22:17:49.0 N/A 454BaseCaller 2.3 analysis_type DNA Viral 454 Alignment and Assembly gssr_id 42633.1 lsid BROAD:SEQUENCING_SAMPLE:42633.1 material_type Viral cDNA project G2847 work_request 20577 SRX016475 127672.WR25030.Catch-63492.C00NLABXX110425.tagged_438.P SRP004072 1000 Genomes PUR Exome Sequencing 1000 Genomes PUR Exome Sequencing Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection SRS010814 HG01182 Catch-63492 WXS GENOMIC Hybrid Selection 160 0 forward Application Read Forward 1 1 barcode Technical Read BarCode CCTTCGCA 2 reverse Application Read Reverse 85 Illumina HiSeq 2000 2011-05-05 13:32:02.0 N/A GAPipeline RTA1.10.36 BI GSSR sample ID 96882.0 BI GSSR sample LSID broadinstitute.org:bsp.prod.sample:1U5LZ BI project name C477 BI work request ID 25030