<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Wang Lab E.coli WGS JX2.0" center_name="The Salk Institute for Biological Studies" accession="SRX020738">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX020738</PRIMARY_ID>
      <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab E.coli WGS JX2.0</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Reassigning the Amber Stop Codon from Nonsense to Sense in Escherichia coli</TITLE>
    <STUDY_REF accession="SRP002476">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP002476</PRIMARY_ID>
        <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab E.coli WGS</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Standard</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS072947">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS072947</PRIMARY_ID>
          <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab E.coli WGS JX2.0</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>JX2.0</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Wang Lab WGS E.coli JX3.0" center_name="The Salk Institute for Biological Studies" accession="SRX020739">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX020739</PRIMARY_ID>
      <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab WGS E.coli JX3.0</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Reassigning the Amber Stop Codon from Nonsense to Sense in Escherichia coli</TITLE>
    <STUDY_REF accession="SRP002476">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP002476</PRIMARY_ID>
        <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab E.coli WGS</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Standard</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS072948">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS072948</PRIMARY_ID>
          <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab WGS E.coli JX3.0</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>JX3.0</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Wang Lab WGS E.coli JX3.0-1" center_name="The Salk Institute for Biological Studies" accession="SRX037799">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX037799</PRIMARY_ID>
      <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab WGS E.coli JX3.0-1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Reassigning the Amber Stop Codon from Nonsense to Sense in Escherichia coli</TITLE>
    <STUDY_REF accession="SRP002476">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP002476</PRIMARY_ID>
        <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab E.coli WGS</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Standard</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS151700">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS151700</PRIMARY_ID>
          <SUBMITTER_ID namespace="The Salk Institute for Biological Studies">Wang Lab WGS E.coli JX3.0-1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>JX3.0-1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
