<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="olkusz1_sequencing" center_name="Nicolaus Copernicus " accession="SRX027253">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX027253</PRIMARY_ID>
      <SUBMITTER_ID namespace="Nicolaus Copernicus">olkusz1_sequencing</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing 357-786 fragments of 16S rRNA genes amplified on Olkusz1 derived DNA</TITLE>
    <STUDY_REF accession="SRP003610">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP003610</PRIMARY_ID>
        <SUBMITTER_ID namespace="Nicolaus Copernicus">olkusze</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Standard Roche protocol for preparation of Titanium amplicon library.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS115063">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS115063</PRIMARY_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Olkusz1_lib</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="olkusz2_sequencing" center_name="Nicolaus Copernicus " accession="SRX027254">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX027254</PRIMARY_ID>
      <SUBMITTER_ID namespace="Nicolaus Copernicus">olkusz2_sequencing</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing 357-786 fragments of 16S rRNA genes amplified on olkusz2 derived metagenomic DNA</TITLE>
    <STUDY_REF accession="SRP003610">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP003610</PRIMARY_ID>
        <SUBMITTER_ID namespace="Nicolaus Copernicus">olkusze</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Standard Roche Titanium amplicon library construction protocol</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS115064">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS115064</PRIMARY_ID>
          <SUBMITTER_ID namespace="Nicolaus Copernicus">Olkusz2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>olkusz2_lib</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="olkusz3_sequencing" center_name="Nicolaus Copernicus " accession="SRX027255">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX027255</PRIMARY_ID>
      <SUBMITTER_ID namespace="Nicolaus Copernicus">olkusz3_sequencing</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing 357-786 fragments of 16S rRNA genes amplified on Olkusz3 derived metagenomic DNA</TITLE>
    <STUDY_REF accession="SRP003610">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP003610</PRIMARY_ID>
        <SUBMITTER_ID namespace="Nicolaus Copernicus">olkusze</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Standard Roche Titanium amplicon library preparation protocol.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS115065">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS115065</PRIMARY_ID>
          <SUBMITTER_ID namespace="Nicolaus Copernicus">Olkusz3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>olkusz3_lib</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
