<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Trialeurodes vaporariorum whole insect" center_name="UE-CEC" accession="SRX027257">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX027257</PRIMARY_ID>
      <SUBMITTER_ID namespace="UE-CEC">Trialeurodes vaporariorum whole insect</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Pyrosequencing the transcriptome of the Greenhouse whitefly reveals multiple messages encoding insecticide targets and detoxifying enzymes</TITLE>
    <STUDY_REF accession="SRP003632">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP003632</PRIMARY_ID>
        <SUBMITTER_ID namespace="UE-CEC">Trialeurodes vaporariorum whole insect</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Whole insects from multiple individuals from a laboratory stock of Trialeurodes vaporariorum were used. First strand cDNA was synthesised using the SMART PCR cDNA Library Construction Kit (Clontech). Double stranded cDNA (ds-cDNA) was synthesised and normalised following the Trimmer Kit for cDNA normalization (Evrogen) guidelines. The optimal condition for ds-cDNA synthesis for each single stranded cDNA template was empirically determined: reaction mixes were subjected to a recommended range of thermocycle numbers and their products checked by electrophoresis (1 % agarose gel). The optimal cycle number was defined as maximum cycle number without signs of overcycling. Ds-cDNA was then purified and concentrated using the DNA Clean and Concentrator kit (Zymogen).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS115174">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS115174</PRIMARY_ID>
          <SUBMITTER_ID namespace="UE-CEC">Trialeurodes vaporariorum whole insect</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Trialeurodes vaporariorum</LIBRARY_NAME>
        <LIBRARY_STRATEGY>EST</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
