SRS116635 SAMN00115102 GSM605634 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name K562 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 025NP,026NP,025NP,gen0146NP,026NP labexpid LID8929,LID8929,LID18559,crg-39,LID18559 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 3,4 localization nucleoplasm localization description That part of the nuclear content other than the chromosomes or the nucleolus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 025NP labexpid LID8929 readtype 1x36 readtype description Single 36 nt reads replicate 3 SRS301470 SAMN00829016 GSM897079 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HeLa-S3 biomaterial_provider ATCC biomaterial_type immortalized cell line line HeLa-S3 datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 011WC,012WC,012WC,011WC labexpid LID21143,LID21146,LID21146,LID21143 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 011WC labexpid LID21143 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301469 SAMN00829015 GSM897078 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name NHEK biomaterial_provider Lonza datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 027C,027C,028C,028C labexpid LID21002,LID21002,LID21004,LID21004 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 027C labexpid LID21002 readtype 1x36 readtype description Single 36 nt reads replicate 3 SRS301463 SAMN00829009 GSM897072 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name H1-hESC biomaterial_provider WiCell Research Institute datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 006C labexpid LID20908 labversion iIDR readtype 1x36 readtype description Single 36 nt reads cell sex M localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 006C labexpid LID20908 readtype 1x36 readtype description Single 36 nt reads replicate 2 SRS301462 SAMN00829008 GSM897071 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name H1-hESC biomaterial_provider WiCell Research Institute datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 006N labexpid LID20907 labversion iIDR readtype 1x36 readtype description Single 36 nt reads cell sex M localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 006N labexpid LID20907 readtype 1x36 readtype description Single 36 nt reads replicate 2 SRS301461 SAMN00829007 GSM897070 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH_RA biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 020WC,019WC,020WC,019WC labexpid LID20747,LID20748,LID20748,LID20747 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 019WC labexpid LID20747 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301460 SAMN00829006 GSM897069 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HeLa-S3 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 011C,012C,011C,012C labexpid LID21145,LID21148,LID21145,LID21148 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 011C labexpid LID21145 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS116634 SAMN00115101 GSM605633 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name GM12878 biomaterial_provider Coriell datatype RnaSeq datatype description Sequencing analysis of RNA expression cell description B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 003N,004N,003N,gen0112N,004N labexpid LID20903,LID20900,LID20903,LID20900,crg-6 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 003N labexpid LID20900 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS116633 SAMN00115100 GSM605632 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name K562 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep gen0133CH,026CH,025CH,025CH,026CH labexpid LID8930,LID18560,LID8930,LID18560,crg-32 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 3,4 localization chromatin localization description Nuclear DNA and associated proteins protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 025CH labexpid LID8930 readtype 1x36 readtype description Single 36 nt reads replicate 3 SRS116632 SAMN00115099 GSM605630 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name K562 biomaterial_provider ATCC biomaterial_type immortalized cell line line K562 datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep gen0130WC,001WC,001WC,002WC,002WC labexpid LID10567,LID10568,LID10568,LID10567,crg-31 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 001WC labexpid LID10567 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS116631 SAMN00115098 GSM605628 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name K562 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 025NL,026NL,026NL,025NL,gen0143NL labexpid LID8928,crg-37,LID18558,LID8928,LID18558 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 3,4 localization nucleolus localization description The part of the nucleus where ribosomal RNA is actively transcribed protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 025NL labexpid LID8928 readtype 1x36 readtype description Single 36 nt reads replicate 3 SRS116630 SAMN00115097 GSM605627 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name GM12878 biomaterial_provider Coriell datatype RnaSeq datatype description Sequencing analysis of RNA expression cell description B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 004C,003C,004C,003C,gen0108C labexpid LID20901,LID20904,LID20901,crg-4,LID20904 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 003C labexpid LID20901 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS116629 SAMN00115096 GSM605625 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name GM12878 biomaterial_provider Coriell biomaterial_type immortalized cell line line GM12878 datatype RnaSeq datatype description Sequencing analysis of RNA expression cell description B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 003WC,003WC,004WC,gen0101WC,004WC labexpid LID20902,LID20899,crg-2,LID20899,LID20902 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 003WC labexpid LID20899 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301482 SAMN00829028 GSM605629 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name K562 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep gen0142C,001C,002C,001C,002C labexpid LID10571,crg-36,LID10572,LID10572,LID10571 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 001C labexpid LID10572 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301477 SAMN00829023 GSM897086 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name NHEK biomaterial_provider Lonza biomaterial_type primary cell cell_type keratinocyte donor_id ENCDO268AAA datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 007WC,008WC,007WC,008WC labexpid LID21000,LID20999,LID21000,LID20999 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 007WC labexpid LID20999 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301476 SAMN00829022 GSM897085 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HepG2 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression cell description hepatocellular carcinoma rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 013N,013N,014N,014N labexpid LID44463,LID44462,LID44462,LID44463 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 013N labexpid LID44462 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301475 SAMN00829021 GSM897084 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HepG2 biomaterial_provider ATCC biomaterial_type immortalized cell line line HepG2 datatype RnaSeq datatype description Sequencing analysis of RNA expression cell description hepatocellular carcinoma rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 014WC,013WC,013WC,014WC labexpid LID44460,LID44461,LID44460,LID44461 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 013WC labexpid LID44460 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301474 SAMN00829020 GSM897083 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087WC,088WC,087WC,088WC labexpid LID47039,LID47039,LID47040,LID47040 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 021WC labexpid LID20749 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301473 SAMN00829019 GSM897082 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HepG2 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression cell description hepatocellular carcinoma rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 013C,014C,014C,013C labexpid LID44464,LID44465,LID44465,LID44464 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 013C labexpid LID44464 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301472 SAMN00829018 GSM897081 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name MCF-7 biomaterial_provider ATCC biomaterial_type immortalized cell line line MCF-7 datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089WC,090WC,089WC,090WC labexpid LID47160,LID47161,LID47161,LID47160 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 015WC,016WC labexpid LID20743,LID20744 labversion iIDR readtype 1x36 readtype description Single 36 nt reads SRS301471 SAMN00829017 GSM897080 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HeLa-S3 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 011N,012N,012N,011N labexpid LID21144,LID21147,LID21144,LID21147 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 011N labexpid LID21144 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301483 SAMN00829029 GSM605635 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name K562 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 001N,002N,gen0151N,001N,002N labexpid LID10570,LID10569,LID10570,LID10569,crg-42 labversion Produced by Hannon Lab,iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 001N labexpid LID10570 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS351978 SAMN01095659 GSM973661 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087N,088N,088N,087N labexpid LID46100,LID46101,LID46100,LID46101 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087N,088N labexpid LID46100,LID46101 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS301468 SAMN00829014 GSM897077 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name BJ biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression cell description skin fibroblast, "The line was established from skin taken from normal foreskin." - ATCC. (PMID: 9916803) rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 037WC,038WC,037WC,038WC labexpid LID20909,LID20909,LID20910,LID20910 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 037WC labexpid LID20909 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301467 SAMN00829013 GSM897076 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name NHEK biomaterial_provider Lonza datatype RnaSeq datatype description Sequencing analysis of RNA expression cell sex F rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 028N,027N,027N,028N labexpid LID21001,LID21003,LID21001,LID21003 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 3,4 localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 027N labexpid LID21001 readtype 1x36 readtype description Single 36 nt reads replicate 3 SRS301466 SAMN00829012 GSM897075 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HUVEC biomaterial_provider Lonza biomaterial_type primary cell cell_type endothelial cell of umbilical vein donor_id ENCDO341AAA datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 029N,030N,030N,029N labexpid LID21056,LID21058,LID21058,LID21056 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 029N labexpid LID21056 readtype 1x36 readtype description Single 36 nt reads replicate 3 SRS301465 SAMN00829011 GSM897074 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name AG04450 biomaterial_provider Coriell biomaterial_type primary cell cell_type fibroblast of lung donor_id ENCDO001AAA datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 018WC,017WC,018WC,017WC labexpid LID20745,LID20746,LID20745,LID20746 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 017WC labexpid LID20745 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS301464 SAMN00829010 GSM897073 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name H1-hESC biomaterial_provider WiCell Research Institute biomaterial_type stem cell line H1-hESC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 006WC,005WC,006WC,005WC labexpid LID20906,LID20905,LID20906,LID20905 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 005WC labexpid LID20905 readtype 1x36 readtype description Single 36 nt reads replicate 1 SRS351979 SAMN01095660 GSM973662 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name CD34+_Mobilized biomaterial_provider Dr. Heimfeld Lab at FHCRC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 043WC labexpid LID46197 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1 protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 043WC labexpid LID46197 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351980 SAMN01095661 GSM973663 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 086N,085N,085N,086N labexpid LID46272,LID46273,LID46272,LID46273 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085N,086N labexpid LID46272,LID46273 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351981 SAMN01095662 GSM973664 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087C,087C,088C,088C labexpid LID46063,LID46062,LID46063,LID46062 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087C,088C labexpid LID46062,LID46063 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351982 SAMN01095663 GSM973665 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 086N,085N,085N,086N labexpid LID46203,LID46204,LID46203,LID46204 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085N,086N labexpid LID46203,LID46204 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351983 SAMN01095664 GSM973666 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085C,086C,085C,086C labexpid LID46205,LID46205,LID46206,LID46206 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085C,086C labexpid LID46205,LID46206 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351984 SAMN01095665 GSM973667 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC biomaterial_type immortalized cell line line SK-N-SH datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 086WC,085WC,086WC,085WC labexpid LID46956,LID46957,LID46957,LID46956 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085WC labexpid LID46956 readtype 1x101 readtype description Single 101 nt reads replicate 3 SRS351985 SAMN01095666 GSM973668 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087WC,088WC,087WC,088WC labexpid LID46058,LID46058,LID46059,LID46059 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cell localization description Whole cell protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087WC,088WC labexpid LID46058,LID46059 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351986 SAMN01095667 GSM973669 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087C,087C,088C,088C labexpid LID46102,LID46103,LID46102,LID46103 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087C,088C labexpid LID46102,LID46103 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351987 SAMN01095668 GSM973670 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045C,046C,046C,045C labexpid LID45888,LID45889,LID45888,LID45889 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045C,046C labexpid LID45888,LID45889 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351989 SAMN01095670 GSM973672 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name MCF-7 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089C,090C,089C,090C labexpid LID46315,LID46315,LID46316,LID46316 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089C,090C labexpid LID46315,LID46316 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351990 SAMN01095671 GSM973673 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045N,046N,045N,046N labexpid LID45886,LID45887,LID45886,LID45887 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045N,046N labexpid LID45886,LID45887 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351991 SAMN01095672 GSM973674 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087WC,088WC,087WC,088WC labexpid LID46098,LID46099,LID46098,LID46099 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cell localization description Whole cell protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087WC,088WC labexpid LID46098,LID46099 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351992 SAMN01095673 GSM973675 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC biomaterial_type immortalized cell line line SK-N-SH datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 086WC,085WC,086WC,085WC labexpid LID46201,LID46202,LID46201,LID46202 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cell localization description Whole cell protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085WC,086WC labexpid LID46201,LID46202 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351993 SAMN01095674 GSM973676 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name MCF-7 biomaterial_provider ATCC biomaterial_type immortalized cell line line MCF-7 datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089WC,090WC,089WC,090WC labexpid LID46458,LID46459,LID46458,LID46459 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cell localization description Whole cell protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089WC,090WC labexpid LID46458,LID46459 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351994 SAMN01095675 GSM973677 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC biomaterial_type immortalized cell line line SK-N-SH datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 086WC,085WC,086WC,085WC labexpid LID46270,LID46270,LID46271,LID46271 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cell localization description Whole cell protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085WC,086WC labexpid LID46270,LID46271 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351995 SAMN01095676 GSM973678 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045N,046N,045N,046N labexpid LID45955,LID45956,LID45955,LID45956 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045N,046N labexpid LID45955,LID45956 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS351996 SAMN01095677 GSM973679 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045N,046N,045N,046N labexpid LID47266,LID47267,LID47266,LID47267 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045N labexpid LID47266 readtype 1x101 readtype description Single 101 nt reads replicate 1 SRS351997 SAMN01095678 GSM973680 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045WC,045WC,046WC,046WC labexpid LID47262,LID47263,LID47262,LID47263 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045WC labexpid LID47262 readtype 1x101 readtype description Single 101 nt reads replicate 1 SRS351998 SAMN01095679 GSM973681 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name MCF-7 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089C,090C,089C,090C labexpid LID47163,LID47162,LID47162,LID47163 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089C labexpid LID47162 readtype 1x101 readtype description Single 101 nt reads replicate 3 SRS351999 SAMN01095680 GSM973682 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name MCF-7 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089N,090N,089N,090N labexpid LID47165,LID47164,LID47164,LID47165 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089N labexpid LID47164 readtype 1x101 readtype description Single 101 nt reads replicate 3 SRS352000 SAMN01095681 GSM973683 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087N,088N,088N,087N labexpid LID46061,LID46060,LID46060,LID46061 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087N,088N labexpid LID46060,LID46061 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352001 SAMN01095682 GSM973684 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087C,087C,088C,088C labexpid LID47041,LID47042,LID47041,LID47042 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087C labexpid LID47041 readtype 1x101 readtype description Single 101 nt reads replicate 3 SRS352002 SAMN01095683 GSM973685 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name A549 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 088N,087N,088N,087N labexpid LID47044,LID47043,LID47044,LID47043 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 087N labexpid LID47043 readtype 1x101 readtype description Single 101 nt reads replicate 3 SRS352003 SAMN01095684 GSM973686 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045C,046C,046C,045C labexpid LID47264,LID47265,LID47264,LID47265 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045C labexpid LID47264 readtype 1x101 readtype description Single 101 nt reads replicate 1 SRS352027 SAMN01095708 GSM977044 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name Monocytes-CD14+ biomaterial_provider S. Heimfeld Laboratory, FHCRC biomaterial_type primary cell cell_type CD14-positive monocyte donor_id ENCDO265AAA,ENCDO266AAA datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 040WC,039WC,039WC,040WC labexpid LID44360,LID44361,LID44360,LID44361 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 039WC,040WC labexpid LID44360,LID44361 labversion iIDR readtype 1x36 readtype description Single 36 nt reads SRS352004 SAMN01095685 GSM973687 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name MCF-7 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089N,090N,089N,090N labexpid LID46313,LID46313,LID46314,LID46314 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089N,090N labexpid LID46313,LID46314 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352005 SAMN01095686 GSM973688 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085C,085C,086C,086C labexpid LID46959,LID46958,LID46958,LID46959 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085C labexpid LID46958 readtype 1x101 readtype description Single 101 nt reads replicate 3 SRS352006 SAMN01095687 GSM973689 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 086N,085N,085N,086N labexpid LID46960,LID46961,LID46960,LID46961 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleus localization description Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085N labexpid LID46960 readtype 1x101 readtype description Single 101 nt reads replicate 3 SRS352007 SAMN01095688 GSM973690 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name MCF-7 biomaterial_provider ATCC biomaterial_type immortalized cell line line MCF-7 datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089WC,090WC,089WC,090WC labexpid LID46312,LID46311,LID46311,LID46312 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cell localization description Whole cell protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 089WC,090WC labexpid LID46311,LID46312 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352008 SAMN01095689 GSM973691 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045WC,045WC,046WC,046WC labexpid LID45107,LID45107,LID45110,LID45110 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045WC,046WC labexpid LID45107,LID45110 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352009 SAMN01095690 GSM973692 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SK-N-SH biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085C,086C,085C,086C labexpid LID46274,LID46275,LID46274,LID46275 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 085C,086C labexpid LID46274,LID46275 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352010 SAMN01095691 GSM973693 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045WC,045WC,046WC,046WC labexpid LID45108,LID45111,LID45111,LID45108 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045WC,046WC labexpid LID45108,LID45111 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352011 SAMN01095692 GSM977028 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name hMSC-BM biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 067WC,068WC,068WC,067WC labexpid LID47658,LID47659,LID47659,LID47658 readtype 1x101 readtype description Single 101 nt reads replicate 1,2 cell sex B localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 067WC,068WC labexpid LID47658,LID47659 readtype 1x101 readtype description Single 101 nt reads SRS351988 SAMN01095669 GSM973671 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name IMR90 biomaterial_provider ATCC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045C,046C,046C,045C labexpid LID45957,LID45958,LID45958,LID45957 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cytosol localization description The fluid between the cells outer membrane and the nucleus protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 045C,046C labexpid LID45957,LID45958 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352013 SAMN01095694 GSM977030 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name H1-neurons biomaterial_provider CDI datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 095WC,096WC,095WC,096WC labexpid LID48354,LID48353,LID48354,LID48353 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol CIP-TAP protocol description This kind of library was made from RNA < 200 nucleotides that was pre-treated sequentially with Calf Intestinal Alkaline Phosphatase followed by Tobacco Acid Pyrophosphatase. Hence, it will be enriched for capped RNAs. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 095WC,096WC labexpid LID48353,LID48354 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352014 SAMN01095695 GSM977031 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name H1-neurons biomaterial_provider CDI datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 095WC,096WC,095WC,096WC labexpid LID48357,LID48358,LID48357,LID48358 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol None protocol description No special treatment or protocol applies rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 095WC,096WC labexpid LID48357,LID48358 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352015 SAMN01095696 GSM977032 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name GM12878 biomaterial_provider Coriell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 091NL,092NL,091NL,092NL labexpid LID47654,LID47653,LID47653,LID47654 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization nucleolus localization description The part of the nucleus where ribosomal RNA is actively transcribed protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 091NL,092NL labexpid LID47653,LID47654 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352016 SAMN01095697 GSM977033 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HVMF biomaterial_provider ScienCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 051WC,052WC,051WC,052WC labexpid LID47244,LID47243,LID47244,LID47243 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 051WC labexpid LID47243 readtype 1x101 readtype description Single 101 nt reads replicate 1 SRS352017 SAMN01095698 GSM977034 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name NHDF biomaterial_provider PromoCell biomaterial_type primary cell cell_type fibroblast of dermis donor_id ENCDO120AAA,ENCDO119AAA datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 050WC,049WC,050WC,049WC labexpid LID47241,LID47242,LID47242,LID47241 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 050WC labexpid LID47242 readtype 1x101 readtype description Single 101 nt reads replicate 2 SRS352018 SAMN01095699 GSM977035 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HAoAF biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 055WC,056WC,056WC,055WC labexpid LID47434,LID47433,LID47434,LID47433 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 056WC labexpid LID47434 readtype 1x101 readtype description Single 101 nt reads replicate 2 SRS352019 SAMN01095700 GSM977036 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HOB biomaterial_provider PromoCell biomaterial_type primary cell cell_type osteoblast donor_id ENCDO123AAA,ENCDO124AAA datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 053WC,054WC,054WC,053WC labexpid LID47431,LID47431,LID47432,LID47432 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 054WC labexpid LID47432 readtype 1x101 readtype description Single 101 nt reads replicate 2 SRS352020 SAMN01095701 GSM977037 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HCH biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 059WC,059WC,060WC,060WC labexpid LID47475,LID47475,LID47476,LID47476 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 059WC labexpid LID47475 readtype 1x101 readtype description Single 101 nt reads replicate 1 SRS352012 SAMN01095693 GSM977029 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name H1-neurons biomaterial_provider CDI datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 095WC,096WC,095WC,096WC labexpid LID48355,LID48356,LID48355,LID48356 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 095WC,096WC labexpid LID48355,LID48356 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352021 SAMN01095702 GSM977038 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HFDPC biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 061WC,062WC,062WC,061WC labexpid LID47478,LID47477,LID47478,LID47477 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 062WC labexpid LID47478 readtype 1x101 readtype description Single 101 nt reads replicate 2 SRS352022 SAMN01095703 GSM977039 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name SkMC biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 047WC,048WC,047WC,048WC labexpid LID47239,LID47240,LID47239,LID47240 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 048WC labexpid LID47240 readtype 1x101 readtype description Single 101 nt reads replicate 2 SRS352023 SAMN01095704 GSM977040 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HAoEC biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 058WC,057WC,057WC,058WC labexpid LID47435,LID47436,LID47435,LID47436 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 057WC labexpid LID47435 readtype 1x101 readtype description Single 101 nt reads replicate 1 SRS352024 SAMN01095705 GSM977041 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name hMSC-AT biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 065WC,065WC,066WC,066WC labexpid LID47479,LID47479,LID47480,LID47480 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 065WC labexpid LID47479 readtype 1x101 readtype description Single 101 nt reads replicate 1 SRS352025 SAMN01095706 GSM977042 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name GM12878 biomaterial_provider Coriell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 091CH,091CH,092CH,092CH labexpid LID47655,LID47656,LID47655,LID47656 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 3,4 localization chromatin localization description Nuclear DNA and associated proteins protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 091CH,092CH labexpid LID47655,LID47656 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352026 SAMN01095707 GSM977043 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name CD20+ biomaterial_provider Dr. Heimfeld Lab at FHCRC datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 042WC,041WC,042WC,041WC labexpid LID44362,LID44363,LID44362,LID44363 labversion iIDR readtype 1x36 readtype description Single 36 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 041WC,042WC labexpid LID44362,LID44363 labversion iIDR readtype 1x36 readtype description Single 36 nt reads SRS352028 SAMN01095709 GSM977045 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name NHEM.f_M2 biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 081WC,081WC,082WC,082WC labexpid LID47611,LID47612,LID47611,LID47612 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 081WC,082WC labexpid LID47611,LID47612 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352029 SAMN01095710 GSM977046 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HWP biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 079WC,080WC,079WC,080WC labexpid LID47610,LID47609,LID47610,LID47609 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 079WC,080WC labexpid LID47609,LID47610 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352030 SAMN01095711 GSM977047 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name NHEM_M2 biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 083WC,083WC,084WC,084WC labexpid LID47613,LID47614,LID47613,LID47614 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 083WC,084WC labexpid LID47613,LID47614 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352031 SAMN01095712 GSM977048 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name hMSC-UC biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 069WC,069WC,070WC,070WC labexpid LID47515,LID47516,LID47516,LID47515 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 069WC,070WC labexpid LID47515,LID47516 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352032 SAMN01095713 GSM977049 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HPC-PL biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 071WC,072WC,072WC,071WC labexpid LID47518,LID47517,LID47518,LID47517 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 071WC,072WC labexpid LID47517,LID47518 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352033 SAMN01095714 GSM977050 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HMEpC biomaterial_provider PromoCell biomaterial_type primary cell cell_type mammary epithelial cell donor_id ENCDO131AAA datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 063WC labexpid LID47657 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 063WC labexpid LID47657 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352034 SAMN01095715 GSM977051 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HSaVEC biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 094WC,093WC,093WC,094WC labexpid LID47615,LID47615,LID47616,LID47616 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 093WC,094WC labexpid LID47615,LID47616 labversion iIDR readtype 1x101 readtype description Single 101 nt reads SRS352035 SAMN01095716 GSM977052 9606 Homo sapiens bioproject 30709 PRJNA30709 source_name HPIEpC biomaterial_provider PromoCell datatype RnaSeq datatype description Sequencing analysis of RNA expression rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 073WC,074WC,073WC,074WC labexpid LID47520,LID47519,LID47519,LID47520 labversion iIDR readtype 1x101 readtype description Single 101 nt reads replicate 1,2 localization cell localization description Whole cell protocol TAP-Only protocol description This kind of library was made from RNA < 200 nucleotides that were pre-treated with Tobacco Acid Pyrophosphatase to remove any 5' caps that would preclude cloning. Hence, both capped and 5' monophosphate RNAs will be cloned. rnaextract shortTotal rnaextract description Rna shorter than 200 nt that has not been seperated based on Poly Adenalyation biorep 073WC,074WC labexpid LID47519,LID47520 labversion iIDR readtype 1x101 readtype description Single 101 nt reads