<STUDY_REF refname="70772" refcenter="WUGSC" accession="SRP005018"/> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of HMP Reference Genome for Actinomyces sp. oral taxon 171 F0337 AOBB-091217_gDNA_tube paired end RANDOM library</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="70773" refcenter="WUGSC" accession="SRS150776"> <POOL> <MEMBER member_name="2862675178_70773" refname="70773" refcenter="WUGSC" accession="SRS150776"> <READ_LABEL read_group_tag="CGATGT">barcode</READ_LABEL> </MEMBER> </POOL> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2857601211</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="260" NOMINAL_SDEV="0.0E0"/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>200</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_LABEL>barcode</READ_LABEL> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE default_length="6" base_coord="101"> <BASECALL read_group_tag="CGATGT" min_match="6" max_mismatch="0" match_edge="full">CGATGT</BASECALL> <BASECALL read_group_tag="GCCAAT" min_match="6" max_mismatch="0" match_edge="full">GCCAAT</BASECALL> <BASECALL read_group_tag="ACAGTG" min_match="6" max_mismatch="0" match_edge="full">ACAGTG</BASECALL> <BASECALL read_group_tag="ACTTGA" min_match="6" max_mismatch="0" match_edge="full">ACTTGA</BASECALL> <BASECALL read_group_tag="ATCACG" min_match="6" max_mismatch="0" match_edge="full">ATCACG</BASECALL> <BASECALL read_group_tag="CAGATC" min_match="6" max_mismatch="0" match_edge="full">CAGATC</BASECALL> <BASECALL read_group_tag="GGCTAC" min_match="6" max_mismatch="0" match_edge="full">GGCTAC</BASECALL> <BASECALL read_group_tag="TTAGGC" min_match="6" max_mismatch="0" match_edge="full">TTAGGC</BASECALL> <BASECALL read_group_tag="TAGCTT" min_match="6" max_mismatch="0" match_edge="full">TAGCTT</BASECALL> <BASECALL read_group_tag="GATCAG" min_match="6" max_mismatch="0" match_edge="full">GATCAG</BASECALL> <BASECALL read_group_tag="CTTGTA" min_match="6" max_mismatch="0" match_edge="full">CTTGTA</BASECALL> <BASECALL read_group_tag="TGACCA" min_match="6" max_mismatch="0" match_edge="full">TGACCA</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>107</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT

SRX036911 70775 <STUDY_REF refname="70772" refcenter="WUGSC" accession="SRP005018"/> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of HMP Reference Genome for Actinomyces sp. oral taxon 171 F0337 AOBB-091217_gDNA_tube paired end RANDOM library</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="70773" refcenter="WUGSC" accession="SRS150776"> <POOL> <MEMBER member_name="2862675178_70773" refname="70773" refcenter="WUGSC" accession="SRS150776"> <READ_LABEL read_group_tag="CGATGT">barcode</READ_LABEL> </MEMBER> </POOL> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2857601211</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED NOMINAL_LENGTH="260" NOMINAL_SDEV="0.0E0"/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>200</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_LABEL>barcode</READ_LABEL> <READ_CLASS>Technical Read</READ_CLASS> <READ_TYPE>BarCode</READ_TYPE> <EXPECTED_BASECALL_TABLE default_length="6" base_coord="101"> <BASECALL read_group_tag="CGATGT" min_match="6" max_mismatch="0" match_edge="full">CGATGT</BASECALL> <BASECALL read_group_tag="GCCAAT" min_match="6" max_mismatch="0" match_edge="full">GCCAAT</BASECALL> <BASECALL read_group_tag="ACAGTG" min_match="6" max_mismatch="0" match_edge="full">ACAGTG</BASECALL> <BASECALL read_group_tag="ACTTGA" min_match="6" max_mismatch="0" match_edge="full">ACTTGA</BASECALL> <BASECALL read_group_tag="ATCACG" min_match="6" max_mismatch="0" match_edge="full">ATCACG</BASECALL> <BASECALL read_group_tag="CAGATC" min_match="6" max_mismatch="0" match_edge="full">CAGATC</BASECALL> <BASECALL read_group_tag="GGCTAC" min_match="6" max_mismatch="0" match_edge="full">GGCTAC</BASECALL> <BASECALL read_group_tag="TTAGGC" min_match="6" max_mismatch="0" match_edge="full">TTAGGC</BASECALL> <BASECALL read_group_tag="TAGCTT" min_match="6" max_mismatch="0" match_edge="full">TAGCTT</BASECALL> <BASECALL read_group_tag="GATCAG" min_match="6" max_mismatch="0" match_edge="full">GATCAG</BASECALL> <BASECALL read_group_tag="CTTGTA" min_match="6" max_mismatch="0" match_edge="full">CTTGTA</BASECALL> <BASECALL read_group_tag="TGACCA" min_match="6" max_mismatch="0" match_edge="full">TGACCA</BASECALL> </EXPECTED_BASECALL_TABLE> </READ_SPEC> <READ_SPEC> <READ_INDEX>2</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>107</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> </EXPERIMENT> </EXPERIMENT_SET>