<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Raw sequencing data for MLL library" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043658">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043658</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for MLL library</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Raw sequencing data for the "MLL-rearranged precursor B-ALL"-representing library</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 10 individual MLL-rearranged precursor B-ALL patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152566">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152566</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for MLL library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MLL-rearranged precursor B-ALL</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Raw sequencing data for TEL-AML1 library" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043673">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043673</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for TEL-AML1 library</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Raw sequencing data for the "TEL-AML1"-representing library</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 10 individual TEL-AML1-positive precursor B-ALL patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152579">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152579</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for TEL-AML1 library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>TEL-AML1-positive</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Raw sequencing data for BCR-ABL library" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043674">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043674</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for BCR-ABL library</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Raw sequencing data for the "BCR-ABL precursor B-ALL"-representing library</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 10 BCR-ABL-positive precursor B-ALL individual patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152580">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152580</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for BCR-ABL library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>BCR-ABL-positive precursor B-ALL</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Deep sequencing of E2A-PBX1" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043675">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043675</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of E2A-PBX1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Deep sequencing of E2A-PBX1-positive precursor B-ALL</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 10 individual E2A-PBX1-positive precursor B-ALL patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152581">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152581</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for E2A-PBX1 library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>E2A-PBX1-positive precursor B-ALL</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>26</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Deep sequencing of hyperdiploid" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043676">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043676</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of hyperdiploid</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Deep sequencing of hyperdiploid precursor B-ALL</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 10 individual hyperdiploid precursor B-ALL patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152582">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152582</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for hyperdiploid library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Hyperdiploid precursor B-ALL</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>26</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Deep sequencing of T-ALL" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043677">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043677</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of T-ALL</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Deep sequencing of T-ALL</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 10 individual T-ALL patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152583">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152583</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for T-ALL library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>T-ALL</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Deep sequencing of B-other" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043678">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043678</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of B-other</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Deep sequencing of B-other precursor B-ALL</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>File contains the raw RNA sequence data as generated by the deep sequencing method for the "B-other precursor B-ALL"-representing library. The library was constructed using pooled RNA extracted from 10 individual patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152584">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152584</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for B-other library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>B-other precursor B-ALL</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Deep sequencing of CD34" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043679">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043679</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of CD34</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Deep sequencing of normal CD34  blood cells</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 3 individual normal CD34   blood cell samples. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152587">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152587</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for CD34  library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>normal CD34  blood cells</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Deep sequencing of normal bone marrow" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043680">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043680</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of normal bone marrow</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Deep sequencing of normal bone marrow</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 10 individual normal bone marrow samples. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152588">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152588</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for normal bone marrow library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>normal bone marrow</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Deep sequencing of thymocytes" center_name="Erasmus MC-Sophia Children's Hospital" accession="SRX043681">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX043681</PRIMARY_ID>
      <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of thymocytes</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Deep sequencing of normal thymocytes</TITLE>
    <STUDY_REF accession="SRP005294">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP005294</PRIMARY_ID>
        <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Deep sequencing of miRNA in pediatric ALL</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>The library was constructed using pooled RNA extracted from 6 individual patients. Only RNA with an RNA Integrity Number more than/equal to 7.5 was used (as measured on the 2100 Bioanalyzer of Agilent, Amstelveen, the Netherlands).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS152590">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS152590</PRIMARY_ID>
          <SUBMITTER_ID namespace="Erasmus MC-Sophia Children's Hospital">Raw sequencing data for thymocytes library</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Normal thymocytes</LIBRARY_NAME>
        <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>OTHER</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>other</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>36</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
