<?xml version="1.0" encoding="UTF-8"?>
<SAMPLE_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <SAMPLE alias="SAMN00210764" accession="SRS172358">
    <IDENTIFIERS>
      <PRIMARY_ID>SRS172358</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioSample">SAMN00210764</EXTERNAL_ID>
    </IDENTIFIERS>
    <TITLE>MIGS Cultured Bacterial/Archaeal sample from Actinomyces sp. oral taxon 178 str. F0338</TITLE>
    <SAMPLE_NAME>
      <TAXON_ID>888051</TAXON_ID>
      <SCIENTIFIC_NAME>Actinomyces sp. oral taxon 178 str. F0338</SCIENTIFIC_NAME>
    </SAMPLE_NAME>
    <DESCRIPTION>Actinomyces sp oral taxon 178 str. F0338</DESCRIPTION>
    <SAMPLE_LINKS>
      <SAMPLE_LINK>
        <URL_LINK>
          <LABEL>Homo sapiens Microbiome Project at Baylor College of Medicine</LABEL>
          <URL>https://www.hgsc.bcm.edu/human-microbiome</URL>
        </URL_LINK>
      </SAMPLE_LINK>
      <SAMPLE_LINK>
        <XREF_LINK>
          <DB>bioproject</DB>
          <ID>53009</ID>
        </XREF_LINK>
      </SAMPLE_LINK>
    </SAMPLE_LINKS>
    <SAMPLE_ATTRIBUTES>
      <SAMPLE_ATTRIBUTE>
        <TAG>finishing strategy (depth of coverage)</TAG>
        <VALUE>Level 2: High-Quality Draft29.2x;341</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>collection date</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>estimated_size</TAG>
        <VALUE>2733000</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isol_growth_condt</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>specific host</TAG>
        <VALUE>Homo sapiens</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>project_type</TAG>
        <VALUE>Reference Genome</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>lat lon</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>biome</TAG>
        <VALUE>terrestrial biome [ENVO:00000446]</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>misc_param: HMP body site</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>nucleic acid extraction</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>feature</TAG>
        <VALUE>Homo sapiens-associated habitat [ENVO:00009003]</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>investigation_type</TAG>
        <VALUE>missing</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>host taxid</TAG>
        <VALUE>9606</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>project_name</TAG>
        <VALUE>Actinomyces sp. oral taxon 178 F0338</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>assembly</TAG>
        <VALUE>Newbler v. 2.3-04192010</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>geo_loc_name</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>source_mat_id</TAG>
        <VALUE>BEI HM-146</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>material</TAG>
        <VALUE>biological product [ENVO:02000043]</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>ref_biomaterial</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>misc_param: HMP supersite</TAG>
        <VALUE>oral</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>num_replicons</TAG>
        <VALUE>not determined</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sop</TAG>
        <VALUE>http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>env_package</TAG>
        <VALUE>missing</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>strain</TAG>
        <VALUE>F0338</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>sequencing method</TAG>
        <VALUE>454-Paired-end</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>isolation-source</TAG>
        <VALUE>oral cavity</VALUE>
      </SAMPLE_ATTRIBUTE>
      <SAMPLE_ATTRIBUTE>
        <TAG>BioSampleModel</TAG>
        <VALUE>MIGS.ba</VALUE>
      </SAMPLE_ATTRIBUTE>
    </SAMPLE_ATTRIBUTES>
  </SAMPLE>
</SAMPLE_SET>
