<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
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      <PRIMARY_ID>SRX067359</PRIMARY_ID>
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    <TITLE>Illumina sequencing of CP1032(5)</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP006924</PRIMARY_ID>
        <SUBMITTER_ID namespace="UMIGS">VCCP10325</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
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      <DESIGN_DESCRIPTION/>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS211192</PRIMARY_ID>
          <SUBMITTER_ID namespace="UMIGS">VCCP10325</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>IL100012000</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
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        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
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          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>193</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>100</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
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  </EXPERIMENT>
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      <PRIMARY_ID>SRX067360</PRIMARY_ID>
      <SUBMITTER_ID namespace="UMIGS">VCCP10325_3KbPE</SUBMITTER_ID>
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    <TITLE>454 sequencing of VCCP10325</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP006924</PRIMARY_ID>
        <SUBMITTER_ID namespace="UMIGS">VCCP10325</SUBMITTER_ID>
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      <DESIGN_DESCRIPTION/>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS211192</PRIMARY_ID>
          <SUBMITTER_ID namespace="UMIGS">VCCP10325</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>4LP100012574</LIBRARY_NAME>
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          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Linker</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL max_mismatch="3" match_edge="full">TCGTATAACTTCGTATAATGTATGCTATACGAAGTTATTACG</BASECALL>
              <BASECALL max_mismatch="3" match_edge="full">CGTAATAACTTCGTATAGCATACATTATACGAAGTTATACGA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>3</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
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      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
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  </EXPERIMENT>
  <EXPERIMENT center_name="UMIGS" alias="IL100012000_20121102_experiment" accession="SRX247310">
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      <SUBMITTER_ID namespace="UMIGS">IL100012000_20121102_experiment</SUBMITTER_ID>
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    <TITLE/>
    <STUDY_REF accession="SRP006924" refcenter="UMIGS" refname="VCCP10325">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP006924</PRIMARY_ID>
        <SUBMITTER_ID namespace="UMIGS">VCCP10325</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Construction Protocol Details</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS211192" refcenter="UMIGS" refname="VCCP10325">
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          <PRIMARY_ID>SRS211192</PRIMARY_ID>
          <SUBMITTER_ID namespace="UMIGS">VCCP10325</SUBMITTER_ID>
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      </SAMPLE_DESCRIPTOR>
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        <LIBRARY_NAME>IL100012000_20121102</LIBRARY_NAME>
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        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
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          <PAIRED/>
        </LIBRARY_LAYOUT>
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      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
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            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
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          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
