<?xml version="1.0" encoding="UTF-8"?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <STUDY center_name="Forestry and Agricultural Biotechnology Institute" alias="Avo-Pc interaction" accession="SRP007811">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP007811</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA72155</EXTERNAL_ID>
      <SUBMITTER_ID namespace="Forestry and Agricultural Biotechnology Institute">Avo-Pc interaction</SUBMITTER_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>EST sequencing and gene expression profiling of defense-related genes from Persea americana infected with Phytophthora cinnamomi.</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Transcriptome Analysis"/>
      <STUDY_ABSTRACT>Root pathogens of the avocado tree, such as P. cinnamomi and their interactions on hosts, are poorly understood and despite the importance of both the avocado crop and the effect Phytophthora has on its cultivation, there is a lack of molecular knowledge underpinning our understanding of defense strategies against the pathogen. To address this lack of molecular knowledge and initiate a better understanding of host-specific to defense, ESTs have been generated using 454 pyrosequencing and profiled 9 defense-related genes from infected avocado roots (tolerant rootstock).</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>Persea americana strain:R0.09</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
    <STUDY_LINKS>
      <STUDY_LINK>
        <XREF_LINK>
          <DB>pubmed</DB>
          <ID>22108245</ID>
        </XREF_LINK>
      </STUDY_LINK>
      <STUDY_LINK>
        <URL_LINK>
          <LABEL>Fruit Tree Biotechnology Programme</LABEL>
          <URL>http://www.fabinet.up.ac.za/ftbp</URL>
        </URL_LINK>
      </STUDY_LINK>
    </STUDY_LINKS>
  </STUDY>
</STUDY_SET>
