<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_2_011408_arc_TGTCA" center_name="MBL" broker_name="ISA converter" accession="SRX092699">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092699</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_2_011408_arc_TGTCA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR8_2_011408_arc_TGTCA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258350" refname="BII-S-24:sample:MCR8_2_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258350</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR8_2_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>MCR8_2_011408_arc_TGTCA</LIBRARY_NAME>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
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      <SPOT_DESCRIPTOR>
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          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="TGTCA">TGTCA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
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      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_1_011208_euk_ATCAG" center_name="MBL" broker_name="ISA converter" accession="SRX092700">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092700</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_1_011208_euk_ATCAG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR3_1_011208_euk_ATCAG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258351" refname="BII-S-24:sample:MCR3_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258351</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR3_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ATCAG">ATCAG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_2_011308_euk_CAGAG" center_name="MBL" broker_name="ISA converter" accession="SRX092701">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092701</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_2_011308_euk_CAGAG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR4_2_011308_euk_CAGAG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258352" refname="BII-S-24:sample:MCR4_2_011308">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258352</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR4_2_011308</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CAGAG">CAGAG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_2_011208_euk_GATCT" center_name="MBL" broker_name="ISA converter" accession="SRX092702">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092702</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_2_011208_euk_GATCT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR7_2_011208_euk_GATCT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258353" refname="BII-S-24:sample:MCR7_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258353</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR7_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GATCT">GATCT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_1_011208_arc_ATAGT" center_name="MBL" broker_name="ISA converter" accession="SRX092703">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092703</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_1_011208_arc_ATAGT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR3_1_011208_arc_ATAGT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258351" refname="BII-S-24:sample:MCR3_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258351</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR3_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ATAGT">ATAGT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_1_011208_arc_GTAGA" center_name="MBL" broker_name="ISA converter" accession="SRX092704">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092704</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_1_011208_arc_GTAGA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR7_1_011208_arc_GTAGA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258354" refname="BII-S-24:sample:MCR7_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258354</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR7_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GTAGA">GTAGA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_2_011408_euk_CATCG" center_name="MBL" broker_name="ISA converter" accession="SRX092705">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092705</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_2_011408_euk_CATCG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR8_2_011408_euk_CATCG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258350" refname="BII-S-24:sample:MCR8_2_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258350</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR8_2_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CATCG">CATCG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_1_011408_arc_CTAGC" center_name="MBL" broker_name="ISA converter" accession="SRX092706">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092706</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_1_011408_arc_CTAGC</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR9_1_011408_arc_CTAGC</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258355" refname="BII-S-24:sample:MCR9_1_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258355</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR9_1_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CTAGC">CTAGC</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_1_011308_arc_ATCGA" center_name="MBL" broker_name="ISA converter" accession="SRX092707">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092707</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_1_011308_arc_ATCGA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR4_1_011308_arc_ATCGA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258356" refname="BII-S-24:sample:MCR4_1_011308">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258356</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR4_1_011308</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ATCGA">ATCGA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_2_011408_euk_CTCGT" center_name="MBL" broker_name="ISA converter" accession="SRX092708">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092708</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_2_011408_euk_CTCGT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR9_2_011408_euk_CTCGT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258357" refname="BII-S-24:sample:MCR9_2_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258357</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR9_2_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CTCGT">CTCGT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_2_011208_arc_ACTAT" center_name="MBL" broker_name="ISA converter" accession="SRX092709">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092709</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_2_011208_arc_ACTAT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR1_2_011208_arc_ACTAT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258358" refname="BII-S-24:sample:MCR1_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258358</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR1_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ACTAT">ACTAT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_1_011208_arc_ACGCA" center_name="MBL" broker_name="ISA converter" accession="SRX092710">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092710</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_1_011208_arc_ACGCA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR1_1_011208_arc_ACGCA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258359" refname="BII-S-24:sample:MCR1_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258359</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR1_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ACGCA">ACGCA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_1_011308_euk_CACTG" center_name="MBL" broker_name="ISA converter" accession="SRX092711">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092711</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_1_011308_euk_CACTG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR4_1_011308_euk_CACTG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258356" refname="BII-S-24:sample:MCR4_1_011308">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258356</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR4_1_011308</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CACTG">CACTG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_1_011408_euk_GATGA" center_name="MBL" broker_name="ISA converter" accession="SRX092712">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092712</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_1_011408_euk_GATGA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR8_1_011408_euk_GATGA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258360" refname="BII-S-24:sample:MCR8_1_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258360</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR8_1_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GATGA">GATGA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_1_011408_arc_TACTA" center_name="MBL" broker_name="ISA converter" accession="SRX092713">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092713</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR8_1_011408_arc_TACTA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR8_1_011408_arc_TACTA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258360" refname="BII-S-24:sample:MCR8_1_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258360</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR8_1_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="TACTA">TACTA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_2_011408_arc_CGCTC" center_name="MBL" broker_name="ISA converter" accession="SRX092714">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092714</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_2_011408_arc_CGCTC</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR9_2_011408_arc_CGCTC</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258357" refname="BII-S-24:sample:MCR9_2_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258357</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR9_2_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CGCTC">CGCTC</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_2_011208_euk_ATGCT" center_name="MBL" broker_name="ISA converter" accession="SRX092715">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092715</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_2_011208_euk_ATGCT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR3_2_011208_euk_ATGCT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258361" refname="BII-S-24:sample:MCR3_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258361</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR3_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ATGCT">ATGCT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_1_011208_arc_GACTC" center_name="MBL" broker_name="ISA converter" accession="SRX092716">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092716</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_1_011208_arc_GACTC</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR6_1_011208_arc_GACTC</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258362" refname="BII-S-24:sample:MCR6_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258362</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR6_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GACTC">GACTC</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_2_011308_arc_CAGTA" center_name="MBL" broker_name="ISA converter" accession="SRX092717">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092717</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR4_2_011308_arc_CAGTA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR4_2_011308_arc_CAGTA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258352" refname="BII-S-24:sample:MCR4_2_011308">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258352</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR4_2_011308</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CAGTA">CAGTA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_2_011208_euk_CTGAT" center_name="MBL" broker_name="ISA converter" accession="SRX092718">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092718</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_2_011208_euk_CTGAT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR6_2_011208_euk_CTGAT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258363" refname="BII-S-24:sample:MCR6_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258363</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR6_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CTGAT">CTGAT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_2_011208_arc_GTGTA" center_name="MBL" broker_name="ISA converter" accession="SRX092719">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092719</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_2_011208_arc_GTGTA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR7_2_011208_arc_GTGTA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258353" refname="BII-S-24:sample:MCR7_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258353</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR7_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GTGTA">GTGTA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR2_1_011208_euk_GCACG" center_name="MBL" broker_name="ISA converter" accession="SRX092720">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092720</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR2_1_011208_euk_GCACG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR2_1_011208_euk_GCACG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258364" refname="BII-S-24:sample:MCR2_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258364</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR2_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GCACG">GCACG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_2_011208_euk_AGATG" center_name="MBL" broker_name="ISA converter" accession="SRX092721">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092721</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_2_011208_euk_AGATG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR1_2_011208_euk_AGATG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258358" refname="BII-S-24:sample:MCR1_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258358</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR1_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="AGATG">AGATG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_2_011208_arc_ATATA" center_name="MBL" broker_name="ISA converter" accession="SRX092722">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092722</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR3_2_011208_arc_ATATA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR3_2_011208_arc_ATATA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258361" refname="BII-S-24:sample:MCR3_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258361</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR3_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ATATA">ATATA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_1_011208_euk_ACACT" center_name="MBL" broker_name="ISA converter" accession="SRX092723">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092723</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR1_1_011208_euk_ACACT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR1_1_011208_euk_ACACT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258359" refname="BII-S-24:sample:MCR1_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258359</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR1_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="ACACT">ACACT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_1_011208_euk_CTGCA" center_name="MBL" broker_name="ISA converter" accession="SRX092724">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092724</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR7_1_011208_euk_CTGCA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR7_1_011208_euk_CTGCA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258354" refname="BII-S-24:sample:MCR7_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258354</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR7_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CTGCA">CTGCA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_1_011208_euk_CGCAG" center_name="MBL" broker_name="ISA converter" accession="SRX092725">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092725</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_1_011208_euk_CGCAG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR6_1_011208_euk_CGCAG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258362" refname="BII-S-24:sample:MCR6_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258362</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR6_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CGCAG">CGCAG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_1_011408_euk_CGTCT" center_name="MBL" broker_name="ISA converter" accession="SRX092726">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092726</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR9_1_011408_euk_CGTCT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR9_1_011408_euk_CGTCT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258355" refname="BII-S-24:sample:MCR9_1_011408">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258355</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR9_1_011408</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CGTCT">CGTCT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_2_011208_arc_GAGAC" center_name="MBL" broker_name="ISA converter" accession="SRX092727">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092727</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR6_2_011208_arc_GAGAC</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR6_2_011208_arc_GAGAC</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258363" refname="BII-S-24:sample:MCR6_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258363</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR6_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GAGAC">GAGAC</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR2_2_011208_euk_GTGAG" center_name="MBL" broker_name="ISA converter" accession="SRX092728">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092728</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.MCR2_2_011208_euk_GTGAG</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample MCR2_2_011208_euk_GTGAG</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258365" refname="BII-S-24:sample:MCR2_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258365</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:MCR2_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="GTGAG">GTGAG</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_2_011208_euk_CATGT" center_name="MBL" broker_name="ISA converter" accession="SRX092729">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092729</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_2_011208_euk_CATGT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample McR5_2_011208_euk_CATGT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258366" refname="BII-S-24:sample:McR5_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258366</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:McR5_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CATGT">CATGT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_2_011208_arc_CTCTA" center_name="MBL" broker_name="ISA converter" accession="SRX092730">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092730</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_2_011208_arc_CTCTA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample McR5_2_011208_arc_CTCTA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258366" refname="BII-S-24:sample:McR5_2_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258366</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:McR5_2_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CTCTA">CTCTA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_1_011208_arc_CGCGA" center_name="MBL" broker_name="ISA converter" accession="SRX092731">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092731</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_1_011208_arc_CGCGA</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample McR5_1_011208_arc_CGCGA</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Archeae  target_gene: 16S rRNA  target_subfragment: V6  pcr_primers: 958FWD:AATTGGANTCAACGCCGG;1048REV-major:CGRCGGCCATGCACCWC;1048REV-minor:CGRCRGCCATGYACCWC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258367" refname="BII-S-24:sample:McR5_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258367</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:McR5_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="16S rRNA" description="Archeae V6 region">
            <PROBE_SET>
              <DB>pubmed</DB>
              <ID>17916733 </ID>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CGCGA">CGCGA</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_1_011208_euk_CAGCT" center_name="MBL" broker_name="ISA converter" accession="SRX092732">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX092732</PRIMARY_ID>
      <SUBMITTER_ID namespace="MBL">BII-S-24:generic_assay:a_LTR_MCR_2008-A&amp;E.McR5_1_011208_euk_CAGCT</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Sequencing library derived from sample McR5_1_011208_euk_CAGCT</TITLE>
    <STUDY_REF accession="SRP007814" refname="BII-S-24">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP007814</PRIMARY_ID>
        <SUBMITTER_ID namespace="MBL">BII-S-24</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>protocol_description: a long description of the library construction  url: http://amarallab.mbl.edu/mirada/mirada.html; http://vamps.mbl.edu  target_taxon: Eukayota  target_gene: 18S rRNA  target_subfragment: V9  pcr_primers: 1380FWD:CCCTGCCHTTTGTACACAC; 1389FWD:TTGTACACACCGCCC; 1510REV:CCTTCYGCAGGTTCACCTAC  pcr_cond: initial denaturation:94degC_4min;denaturation:94degC_45sec;annealing:55degC_45sec;elongation:72degC_1min;final elongation:72degC_10 min;28 cycles</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS258367" refname="BII-S-24:sample:McR5_1_011208">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS258367</PRIMARY_ID>
          <SUBMITTER_ID namespace="MBL">BII-S-24:sample:McR5_1_011208</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME/>
        <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>METAGENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PCR</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <TARGETED_LOCI>
          <LOCUS locus_name="other" description="Eukaryotic 18S rRNA V9 region">
            <PROBE_SET>
              <DB/>
              <ID/>
            </PROBE_SET>
          </LOCUS>
        </TARGETED_LOCI>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>BarCode</READ_TYPE>
            <EXPECTED_BASECALL_TABLE>
              <BASECALL read_group_tag="CAGCT">CAGCT</BASECALL>
            </EXPECTED_BASECALL_TABLE>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>2</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <RELATIVE_ORDER follows_read_index="1"/>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
