<STUDY_REF refname="phs000245_46" refcenter="NHGRI" accession="SRP003602"> <IDENTIFIERS> <PRIMARY_ID>SRP003602</PRIMARY_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of Whole Genome Sequencing of a Triple Negative Breast Cancer Patient: Matched Primary Tumor, Normal... 2819062923 paired end RANDOM library</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="D100109" refcenter="NHGRI_TripleNegativeBreastCancer" accession="SRS115050"> <IDENTIFIERS> <PRIMARY_ID>SRS115050</PRIMARY_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2771894032</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>150</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>76</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> <EXPERIMENT_ATTRIBUTES> <EXPERIMENT_ATTRIBUTE> <TAG>secondary accessions</TAG> <VALUE>SRX098163, SRX098164, SRX098165, SRX098166, SRX098167, SRX098169, SRX098170, SRX098171, SRX098172</VALUE> </EXPERIMENT_ATTRIBUTE> </EXPERIMENT_ATTRIBUTES> </EXPERIMENT> </EXPERIMENT

SRX098168 115223 <STUDY_REF refname="phs000245_46" refcenter="NHGRI" accession="SRP003602"> <IDENTIFIERS> <PRIMARY_ID>SRP003602</PRIMARY_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION>Illumina sequencing of Whole Genome Sequencing of a Triple Negative Breast Cancer Patient: Matched Primary Tumor, Normal... 2819062923 paired end RANDOM library</DESIGN_DESCRIPTION> <SAMPLE_DESCRIPTOR refname="D100109" refcenter="NHGRI_TripleNegativeBreastCancer" accession="SRS115050"> <IDENTIFIERS> <PRIMARY_ID>SRS115050</PRIMARY_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>2771894032</LIBRARY_NAME> <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY> <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE> <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <SINGLE/> </LIBRARY_LAYOUT> </LIBRARY_DESCRIPTOR> <SPOT_DESCRIPTOR> <SPOT_DECODE_SPEC> <SPOT_LENGTH>150</SPOT_LENGTH> <READ_SPEC> <READ_INDEX>0</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Forward</READ_TYPE> <BASE_COORD>1</BASE_COORD> </READ_SPEC> <READ_SPEC> <READ_INDEX>1</READ_INDEX> <READ_CLASS>Application Read</READ_CLASS> <READ_TYPE>Reverse</READ_TYPE> <BASE_COORD>76</BASE_COORD> </READ_SPEC> </SPOT_DECODE_SPEC> </SPOT_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> <PROCESSING/> <EXPERIMENT_ATTRIBUTES> <EXPERIMENT_ATTRIBUTE> <TAG>secondary accessions</TAG> <VALUE>SRX098163, SRX098164, SRX098165, SRX098166, SRX098167, SRX098169, SRX098170, SRX098171, SRX098172</VALUE> </EXPERIMENT_ATTRIBUTE> </EXPERIMENT_ATTRIBUTES> </EXPERIMENT> </EXPERIMENT_SET>