<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="4nqo_mrna" center_name="The Jackson Laboratory" accession="SRX154298">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX154298</PRIMARY_ID>
      <SUBMITTER_ID namespace="The Jackson Laboratory">4nqo_mrna</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Transcriptome changes in yeast in response to genotoxic stress</TITLE>
    <STUDY_REF accession="SRP013706">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP013706</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Described in detail in "Direct RNA Sequencing," Oszolak et al, Nature 461, 814-818 (8 October 2009)</DESIGN_DESCRIPTION>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS345523</PRIMARY_ID>
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      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>4nqo_yeast</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <HELICOS>
        <INSTRUMENT_MODEL>Helicos HeliScope</INSTRUMENT_MODEL>
      </HELICOS>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
