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    <TITLE>GSM1102658: KD_E14_H3K4me3_ChIP-seq; Mus musculus; ChIP-Seq</TITLE>
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          <DB>gds</DB>
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      <PRIMARY_ID>SRX252752</PRIMARY_ID>
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    <TITLE>GSM1102659: KD_E14_H3K9me3_ChIP-seq; Mus musculus; ChIP-Seq</TITLE>
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      <SAMPLE_DESCRIPTOR accession="SRS403017" refname="GSM1102659">
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          <DB>gds</DB>
          <ID>301102659</ID>
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      <EXPERIMENT_ATTRIBUTE>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX252756</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1102663_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1102663: mouse_ICM_RNA-seq; Mus musculus; RNA-Seq</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
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      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS403021" refname="GSM1102663">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS403021</PRIMARY_ID>
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      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
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    <PLATFORM>
      <ABI_SOLID>
        <INSTRUMENT_MODEL>AB SOLiD System 3.0</INSTRUMENT_MODEL>
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    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1102663</URL>
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      </EXPERIMENT_LINK>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>301102663</ID>
        </XREF_LINK>
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    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
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  <EXPERIMENT alias="GSM1102664_1" accession="SRX252757" center_name="GEO">
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      <PRIMARY_ID>SRX252757</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1102664_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1102664: mouse_Blastocyst_RNA-seq; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
        <SUBMITTER_ID namespace="GEO">GSE45338</SUBMITTER_ID>
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    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS403022" refname="GSM1102664">
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          <PRIMARY_ID>SRS403022</PRIMARY_ID>
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      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1102664</URL>
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      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>301102664</ID>
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    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM1102664</VALUE>
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  <EXPERIMENT alias="GSM1656167" accession="SRX992415" center_name="GEO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX992415</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1656167</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1656167: E14 H3R26Cit ChIP-Seq; Mus musculus; ChIP-Seq</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
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      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS907133">
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          <PRIMARY_ID>SRS907133</PRIMARY_ID>
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      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
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    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample GSM1656167</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1656167</URL>
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        <XREF_LINK>
          <DB>gds</DB>
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      <EXPERIMENT_ATTRIBUTE>
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      <PRIMARY_ID>SRX2416683</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425393</SUBMITTER_ID>
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    <TITLE>GSM2425393: E14_Smarcad1_ChIP-seq; Mus musculus; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854247">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854247</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425393</EXTERNAL_ID>
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        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425393</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
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      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2425393</VALUE>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX2416684</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425394</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2425394: female_Smarcad1_ChIP-Seq; Mus musculus; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
      </IDENTIFIERS>
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    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854248">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854248</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425394</EXTERNAL_ID>
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      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425394</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
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      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
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      <PRIMARY_ID>SRX2416685</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425395</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2425395: PADI_inhibition_Smarcad1_ChIP-Seq; Mus musculus; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
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      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854249">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854249</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425395</EXTERNAL_ID>
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      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425395</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2425395</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2425396" accession="SRX2416686">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2416686</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425396</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2425396: KD_Smarcad1_ChIP-Seq; Mus musculus; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
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    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854250">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854250</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425396</EXTERNAL_ID>
        </IDENTIFIERS>
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      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425396</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2425396</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2425397" accession="SRX2416687">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2416687</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425397</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2425397: KD_E14_H3K27Ac_ChIP-seq; Mus musculus; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854251">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854251</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425397</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425397</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2425397</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2425398" accession="SRX2416688">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2416688</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425398</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2425398: PADI_inhibition_H3K9me3_ChIP-Seq; Mus musculus; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854252">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854252</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425398</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425398</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2425398</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2425399" accession="SRX2416689">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2416689</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425399</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2425399: mouse_ES_RNASeq; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854253">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854253</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425399</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425399</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2425399</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM2425400" accession="SRX2416690">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX2416690</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM2425400</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM2425400: mouse_ES_Smarcad1_KD_RNASeq; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP019829" refname="GSE45338">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP019829</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS1854254">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS1854254</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM2425400</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Cells were scraped off dishes and collected by centrifuge. Cross-linked chromatin complexes were isolated from the Nuclei lysis buffer and then sonicated to obtain fragments in a size range between 350-500bp. H3R26Cit antibody (ab19847) were incubated with solubilized DNA fragments overnight at 4°C. Protein A/G agarose beads (Pierce, Rockford, IL) were used to capture the antibody-chromatin complex followed by washes and elution with 1% SDS. The DNA was recovered by reversing the cross-links with 20 mM NaCl at 65°C overnight. DNA was purified by QIAquick PCR Purification Kit (Qiagen 28106) and dissolving in a final volume of 30ul per immunoprecipitation. The Protocol of KAPA High-Throughput Library Preparation Kit (Cat. No. KK8234)</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>302425400</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM2425400</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
