<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="Chinese Lotus WGS 200bp" accession="SRX270673" center_name="CSHL">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX270673</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSHL">Chinese Lotus WGS 200bp</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Chinese Lotus WGS 200bp</TITLE>
    <STUDY_REF accession="SRP021228">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP021228</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>200bp pe interleaved</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS415463">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS415463</PRIMARY_ID>
          <SUBMITTER_ID namespace="CSHL">Nelumbo nucifera sequencing and assembly</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>180</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="180"/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>200</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>101</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Chinese Lotus WGS 500bp" accession="SRX271024" center_name="CSHL">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX271024</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSHL">Chinese Lotus WGS 500bp</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Chinese Lotus WGS 500bp</TITLE>
    <STUDY_REF accession="SRP021228">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP021228</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>500bp pe interleaved</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS415463">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS415463</PRIMARY_ID>
          <SUBMITTER_ID namespace="CSHL">Nelumbo nucifera sequencing and assembly</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>500</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="500"/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>200</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>101</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Chinese Lotus WGS 3kbp" accession="SRX271026" center_name="CSHL">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX271026</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSHL">Chinese Lotus WGS 3kbp</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Chinese Lotus WGS 3kbp mates</TITLE>
    <STUDY_REF accession="SRP021228">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP021228</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>3kbp circularization interleaved</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS415463">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS415463</PRIMARY_ID>
          <SUBMITTER_ID namespace="CSHL">Nelumbo nucifera sequencing and assembly</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>3kbp</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="3000"/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>70</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>36</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Chinese Lotus WGS 20kbp" accession="SRX271027" center_name="CSHL">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX271027</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSHL">Chinese Lotus WGS 20kbp</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Chinese Lotus WGS 20kbp</TITLE>
    <STUDY_REF accession="SRP021228">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP021228</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>20kbp circularization</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS415463">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS415463</PRIMARY_ID>
          <SUBMITTER_ID namespace="CSHL">Nelumbo nucifera sequencing and assembly</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>20kbp</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <LS454>
        <INSTRUMENT_MODEL>454 GS FLX Titanium</INSTRUMENT_MODEL>
      </LS454>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="Chinese WGS Lotus 8kbp" accession="SRX271145" center_name="CSHL">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX271145</PRIMARY_ID>
      <SUBMITTER_ID namespace="CSHL">Chinese WGS Lotus 8kbp</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Chinese Lotus WGS 8kbp mates</TITLE>
    <STUDY_REF accession="SRP021228">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP021228</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>8kbp circularization interleaved</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS415463">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS415463</PRIMARY_ID>
          <SUBMITTER_ID namespace="CSHL">Nelumbo nucifera sequencing and assembly</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>8kbp</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="8000"/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>70</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>36</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
