<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="GSM1139912_1" accession="SRX277579" center_name="GEO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX277579</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1139912_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1139912: DNaseI-seq 0d biological replicate 1; Arabidopsis thaliana; DNase-Hypersensitivity</TITLE>
    <STUDY_REF accession="SRP022587" refname="GSE46894">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP022587</PRIMARY_ID>
        <SUBMITTER_ID namespace="GEO">GSE46894</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS420692">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS420692</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM1139912</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>DNase-Hypersensitivity</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>DNase</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Nuclei isolation from 0.2 g of plant material was performed according to (Zhang et al., 2007) and DNA digestion was performed according (Hesselberth et al., 2009). Two biological replicates for each time point were sequenced on Illumina HighSeq2000. Libraries were prepared using the Illumina according to manufacture's instructions of the sample prep kit from Illumina</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1139912</URL>
        </URL_LINK>
      </EXPERIMENT_LINK>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>301139912</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM1139912</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM1139913_1" accession="SRX277580" center_name="GEO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX277580</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1139913_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1139913: DNaseI-seq 2d biological replicate 1; Arabidopsis thaliana; DNase-Hypersensitivity</TITLE>
    <STUDY_REF accession="SRP022587" refname="GSE46894">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP022587</PRIMARY_ID>
        <SUBMITTER_ID namespace="GEO">GSE46894</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS420691">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS420691</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM1139913</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>DNase-Hypersensitivity</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>DNase</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Nuclei isolation from 0.2 g of plant material was performed according to (Zhang et al., 2007) and DNA digestion was performed according (Hesselberth et al., 2009). Two biological replicates for each time point were sequenced on Illumina HighSeq2000. Libraries were prepared using the Illumina according to manufacture's instructions of the sample prep kit from Illumina</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1139913</URL>
        </URL_LINK>
      </EXPERIMENT_LINK>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>301139913</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM1139913</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM1139914_1" accession="SRX277581" center_name="GEO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX277581</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1139914_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1139914: DNaseI-seq 4d biological replicate 1; Arabidopsis thaliana; DNase-Hypersensitivity</TITLE>
    <STUDY_REF accession="SRP022587" refname="GSE46894">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP022587</PRIMARY_ID>
        <SUBMITTER_ID namespace="GEO">GSE46894</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS420693">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS420693</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM1139914</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>DNase-Hypersensitivity</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>DNase</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Nuclei isolation from 0.2 g of plant material was performed according to (Zhang et al., 2007) and DNA digestion was performed according (Hesselberth et al., 2009). Two biological replicates for each time point were sequenced on Illumina HighSeq2000. Libraries were prepared using the Illumina according to manufacture's instructions of the sample prep kit from Illumina</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1139914</URL>
        </URL_LINK>
      </EXPERIMENT_LINK>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>301139914</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM1139914</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM1139915_1" accession="SRX277582" center_name="GEO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX277582</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1139915_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1139915: DNaseI-seq 8d biological replicate 1; Arabidopsis thaliana; DNase-Hypersensitivity</TITLE>
    <STUDY_REF accession="SRP022587" refname="GSE46894">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP022587</PRIMARY_ID>
        <SUBMITTER_ID namespace="GEO">GSE46894</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS420694">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS420694</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM1139915</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>DNase-Hypersensitivity</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>DNase</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Nuclei isolation from 0.2 g of plant material was performed according to (Zhang et al., 2007) and DNA digestion was performed according (Hesselberth et al., 2009). Two biological replicates for each time point were sequenced on Illumina HighSeq2000. Libraries were prepared using the Illumina according to manufacture's instructions of the sample prep kit from Illumina</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1139915</URL>
        </URL_LINK>
      </EXPERIMENT_LINK>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>301139915</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM1139915</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM1139916_1" accession="SRX277583" center_name="GEO">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX277583</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM1139916_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM1139916: DNaseI-seq control; Arabidopsis thaliana; DNase-Hypersensitivity</TITLE>
    <STUDY_REF accession="SRP022587" refname="GSE46894">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP022587</PRIMARY_ID>
        <SUBMITTER_ID namespace="GEO">GSE46894</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS420695">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS420695</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM1139916</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>DNase-Hypersensitivity</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>DNase</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Nuclei isolation from 0.2 g of plant material was performed according to (Zhang et al., 2007) and DNA digestion was performed according (Hesselberth et al., 2009). Two biological replicates for each time point were sequenced on Illumina HighSeq2000. Libraries were prepared using the Illumina according to manufacture's instructions of the sample prep kit from Illumina</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <URL_LINK>
          <LABEL>GEO Sample</LABEL>
          <URL>http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1139916</URL>
        </URL_LINK>
      </EXPERIMENT_LINK>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>301139916</ID>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM1139916</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
