<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="S. lophii genome sample 42 April 2009" accession="SRX306679" center_name="University of Exeter">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX306679</PRIMARY_ID>
      <SUBMITTER_ID namespace="University of Exeter">S. lophii genome sample 42 April 2009</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Genome sequence survey of the microsporidian S. lophii</TITLE>
    <STUDY_REF accession="SRP026099">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP026099</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA73605</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>DNA was sheared using a Covalis Nebuliser. Sheared fragments of approximately 400 bp in size were selected using a polyacrylamide gel and used to create a library using the Illumina paired-end sample preparation protocol (revision A June 2008)</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS445606">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS445606</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN02141961</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Slophii_42</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>unspecified</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>72</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>37</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina Genome Analyzer II</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
