<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="GSM4206910" accession="SRX7278109">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7278109</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4206910</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4206910: Fever; Salmo salar; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP234925" refname="GSE141554">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP234925</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5771783">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5771783</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4206910</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Random fish were sampled for each treatment (Mock, Fever, No-Fever; n= 9 per treatment and replicate x3 N= 18) and time (24, 48, 72 and 96 hpi) and subsequently snap-frozen in liquid nitrogen and conserved at -80 °C. Total RNA was extracted from spleen with Ribo-Pure™ Kit (Ambion®, USA) according to the manufacturer's instructions. KAPA Stranded mRNA-Seq Kit (KapaBiosystems, MA, USA) was used with 3 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304206910</ID>
          <LABEL>GSM4206910</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4206910</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4206911" accession="SRX7278110">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7278110</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4206911</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4206911: No fever; Salmo salar; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP234925" refname="GSE141554">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP234925</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5771784">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5771784</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4206911</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Random fish were sampled for each treatment (Mock, Fever, No-Fever; n= 9 per treatment and replicate x3 N= 18) and time (24, 48, 72 and 96 hpi) and subsequently snap-frozen in liquid nitrogen and conserved at -80 °C. Total RNA was extracted from spleen with Ribo-Pure™ Kit (Ambion®, USA) according to the manufacturer's instructions. KAPA Stranded mRNA-Seq Kit (KapaBiosystems, MA, USA) was used with 3 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304206911</ID>
          <LABEL>GSM4206911</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4206911</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM4206912" accession="SRX7278111">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX7278111</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM4206912</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM4206912: Mock; Salmo salar; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP234925" refname="GSE141554">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP234925</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS5771785">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS5771785</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM4206912</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Random fish were sampled for each treatment (Mock, Fever, No-Fever; n= 9 per treatment and replicate x3 N= 18) and time (24, 48, 72 and 96 hpi) and subsequently snap-frozen in liquid nitrogen and conserved at -80 °C. Total RNA was extracted from spleen with Ribo-Pure™ Kit (Ambion®, USA) according to the manufacturer's instructions. KAPA Stranded mRNA-Seq Kit (KapaBiosystems, MA, USA) was used with 3 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>304206912</ID>
          <LABEL>GSM4206912</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM4206912</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
