SRX377734 GSM1264686 SRP033014 GSE52400 SRS502541 GSM1264686 ChIP-Seq GENOMIC ChIP Somatic embryo material was cross-linked using formaldehyde and ground prior to nuclear extraction. The nuclear pellet was sonicated and the lysate was used for immunoprecipitation with the µMACS GFP Isolation Kit (Miltenyi). After proteinase K treatment, the DNA was purified using the QIAquick kit (Qiagen). The Illumina ChIP-Seq library preparation kit was used for library construction using the manufacturer's protocol, except that 1:10 dilutions were used of the adapters. Library fragments of 200-500 bp were excised from the gel and purified. Illumina HiSeq 2000 GEO Sample GSM1264686 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1264686 gds 301264686 GEO Accession GSM1264686 SRX377735 GSM1264687 SRP033014 GSE52400 SRS502542 GSM1264687 ChIP-Seq GENOMIC ChIP Somatic embryo material was cross-linked using formaldehyde and ground prior to nuclear extraction. The nuclear pellet was sonicated and the lysate was used for immunoprecipitation with the µMACS GFP Isolation Kit (Miltenyi). After proteinase K treatment, the DNA was purified using the QIAquick kit (Qiagen). The Illumina ChIP-Seq library preparation kit was used for library construction using the manufacturer's protocol, except that 1:10 dilutions were used of the adapters. Library fragments of 200-500 bp were excised from the gel and purified. Illumina HiSeq 2000 GEO Sample GSM1264687 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1264687 gds 301264687 GEO Accession GSM1264687 SRX377736 GSM1264688 SRP033014 GSE52400 SRS502543 GSM1264688 ChIP-Seq GENOMIC ChIP Somatic embryo material was cross-linked using formaldehyde and ground prior to nuclear extraction. The nuclear pellet was sonicated and the lysate was used for immunoprecipitation with the µMACS GFP Isolation Kit (Miltenyi). After proteinase K treatment, the DNA was purified using the QIAquick kit (Qiagen). The Illumina ChIP-Seq library preparation kit was used for library construction using the manufacturer's protocol, except that 1:10 dilutions were used of the adapters. Library fragments of 200-500 bp were excised from the gel and purified. Illumina HiSeq 2000 GEO Sample GSM1264688 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1264688 gds 301264688 GEO Accession GSM1264688 SRX377737 GSM1264689 SRP033014 GSE52400 SRS502544 GSM1264689 ChIP-Seq GENOMIC ChIP Somatic embryo material was cross-linked using formaldehyde and ground prior to nuclear extraction. The nuclear pellet was sonicated and the lysate was used for immunoprecipitation with the µMACS GFP Isolation Kit (Miltenyi). After proteinase K treatment, the DNA was purified using the QIAquick kit (Qiagen). The Illumina ChIP-Seq library preparation kit was used for library construction using the manufacturer's protocol, except that 1:10 dilutions were used of the adapters. Library fragments of 200-500 bp were excised from the gel and purified. Illumina HiSeq 2000 GEO Sample GSM1264689 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1264689 gds 301264689 GEO Accession GSM1264689