<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="PSS_illumina" accession="SRX380245" center_name="KRIBB">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX380245</PRIMARY_ID>
      <SUBMITTER_ID namespace="KRIBB">PSS_illumina</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>HiSeq 2000-based genome sequencing for Pseudomonas syringae subsp. syringae KCTC 12500(T)</TITLE>
    <STUDY_REF accession="SRP033141">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP033141</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA227265</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS504702">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS504702</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN02404616</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PSS_01</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED NOMINAL_LENGTH="400" NOMINAL_SDEV="80"/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>202</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Reverse</READ_TYPE>
            <BASE_COORD>102</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2000</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
  <EXPERIMENT alias="PSS_ion_torrent_PGM" accession="SRX380247" center_name="KRIBB">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX380247</PRIMARY_ID>
      <SUBMITTER_ID namespace="KRIBB">PSS_ion_torrent_PGM</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Ion Torrent PGM-based genome sequencing of Pseudomonas syringae subsp. syringae KCTC 12500(T)</TITLE>
    <STUDY_REF accession="SRP033141">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP033141</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Using SOLiD mate-pair library construction kit. Library size was set to 3 kb.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS504702">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS504702</PRIMARY_ID>
          <SUBMITTER_ID namespace="KRIBB">Pseudomonas syringae</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>PSS_ion_01</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
      <SPOT_DESCRIPTOR>
        <SPOT_DECODE_SPEC>
          <SPOT_LENGTH>0</SPOT_LENGTH>
          <READ_SPEC>
            <READ_INDEX>0</READ_INDEX>
            <READ_CLASS>Technical Read</READ_CLASS>
            <READ_TYPE>Adapter</READ_TYPE>
            <BASE_COORD>1</BASE_COORD>
          </READ_SPEC>
          <READ_SPEC>
            <READ_INDEX>1</READ_INDEX>
            <READ_CLASS>Application Read</READ_CLASS>
            <READ_TYPE>Forward</READ_TYPE>
            <BASE_COORD>5</BASE_COORD>
          </READ_SPEC>
        </SPOT_DECODE_SPEC>
      </SPOT_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ION_TORRENT>
        <INSTRUMENT_MODEL>Ion Torrent PGM</INSTRUMENT_MODEL>
      </ION_TORRENT>
    </PLATFORM>
    <PROCESSING/>
  </EXPERIMENT>
</EXPERIMENT_SET>
