SRX381110 GSM1272357 SRP033229 GSE52600 SRS505504 GSM1272357 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272357 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272357 gds 301272357 GEO Accession GSM1272357 SRX381111 GSM1272358 SRP033229 GSE52600 SRS505503 GSM1272358 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272358 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272358 gds 301272358 GEO Accession GSM1272358 SRX381112 GSM1272359 SRP033229 GSE52600 SRS505505 GSM1272359 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272359 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272359 gds 301272359 GEO Accession GSM1272359 SRX381113 GSM1272360 SRP033229 GSE52600 SRS505506 GSM1272360 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272360 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272360 gds 301272360 GEO Accession GSM1272360 SRX381114 GSM1272361 SRP033229 GSE52600 SRS505507 GSM1272361 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272361 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272361 gds 301272361 GEO Accession GSM1272361 SRX381115 GSM1272362 SRP033229 GSE52600 SRS505508 GSM1272362 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272362 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272362 gds 301272362 GEO Accession GSM1272362 SRX381116 GSM1272363 SRP033229 GSE52600 SRS505509 GSM1272363 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272363 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272363 gds 301272363 GEO Accession GSM1272363 SRX381117 GSM1272364 SRP033229 GSE52600 SRS505510 GSM1272364 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272364 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272364 gds 301272364 GEO Accession GSM1272364 SRX381118 GSM1272365 SRP033229 GSE52600 SRS505511 GSM1272365 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272365 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272365 gds 301272365 GEO Accession GSM1272365 SRX381119 GSM1272366 SRP033229 GSE52600 SRS505512 GSM1272366 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272366 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272366 gds 301272366 GEO Accession GSM1272366 SRX381120 GSM1272367 SRP033229 GSE52600 SRS505513 GSM1272367 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272367 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272367 gds 301272367 GEO Accession GSM1272367 SRX381121 GSM1272368 SRP033229 GSE52600 SRS505514 GSM1272368 OTHER TRANSCRIPTOMIC other Cells well harvested by direct addition of TRIzol reagent (Ambion Cat.#15596018) to the cell culture plate after removal of the media and extracted using Trizol reagent protocol. Subsequently, the total RNA was DNase treated using DNase I (Promega Cat.# M610A) for 20 minutes at 37ºC followed by acid phenol/chloroform extraction, chloroform extraction and overnight NaCl2 precipitation. The precipitated RNA was washed with 70ºC ethanol and re-suspended in ultra pure H2O. RNA concentration and purity were verified by nanodrop followed by BioAnalyzer for quality control. Double polyA+ RNA selection was performed using twice Invitrogen Dynabeads mRNA Purification Kit (Cat. #610.06) protocol. RNA concentration and purity were once again verified by nanodrop followed by BioAnalyzer for quality control. For the input and post m6A-RNA IP fraction (i.e. m6A positive fraction), 100ng of RNA was used for library construction using TrueSeq Stranded mRNA Sample Preparation Guide, entering the protocol by adding the Fragment, Prime, Finish Mix, skipping the elution step and proceeding directly to synthesis of the First Strand cDNA. From that point on, the exact steps of the Illumina TruSeq Stranded mRNA sample Preparation Guide were followed to the end. Illumina HiSeq 2000 GEO Sample GSM1272368 http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1272368 gds 301272368 GEO Accession GSM1272368