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<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT alias="GSM5001892" accession="SRX9773877">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX9773877</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5001892</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5001892: Jurkat_H3K4me3_OICR-9429_Spike; Homo sapiens; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP300178" refname="GSE164184">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP300178</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS7961363">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS7961363</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5001892</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>ChIP was performed using anti-H3K4me3 (C15410003; Diagenode). 5x106 Jurkat cells were used for each treatment with PBIT (10 uM) or OICR-9429 (25 uM) for 5 hours. Briefly, cells were cross-linked with 1% formaldehyde for 10 min at room temperature before the reaction was quenched with 250 mM glycine. Cell pellets were washed twice with PBS and nuclear lysates sonicated for 6 cycles using a Bioruptor Pico (Diagenode). Immunoprecipitation was performed with 5x105 Jurkat cells, complemented with 10% of Drosophila chromatin from S2 cells as spike in control (Orlando et al. 2014). Antibody (1 ug) was added to each sample and immunoprecipitation performed overnight on a rotator at 4 °C. 20 uL of magnetic beads (Dynabeads protein G, Novex Life technologies) was added to each sample. After 5 washes with three different buffers according to the BLUEPRINT protocol (http://dcc.blueprint-epigenome.eu/#/md/methods). ChIP-bound fractions were extracted by incubation for 20 min at room temperature with elution buffer (1% SDS, 0.1M NaHCO3). Cross-linking was then reversed by incubation at 65°C. Proteinase K (10mg/mL) was added to eliminate protein from the samples. DNA was extracted using the QIAquick MinElute PCR purification kit (Qiagen) following manufacturer's instructions. ChIP-Seq libraries were generated with the MicroPlex Library Preparation Kit (Diagenode), according to the manufacturer instructions. The libraries were sequenced in paired-end 50+30 bp mode using the NextSeq® 500/550 (Illumina) according to manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305001892</ID>
          <LABEL>GSM5001892</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5001892</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5001893" accession="SRX9773878">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX9773878</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5001893</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5001893: Jurkat_H3K4me3_PBIT_Spike; Homo sapiens; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP300178" refname="GSE164184">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP300178</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS7961365">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS7961365</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5001893</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>ChIP was performed using anti-H3K4me3 (C15410003; Diagenode). 5x106 Jurkat cells were used for each treatment with PBIT (10 uM) or OICR-9429 (25 uM) for 5 hours. Briefly, cells were cross-linked with 1% formaldehyde for 10 min at room temperature before the reaction was quenched with 250 mM glycine. Cell pellets were washed twice with PBS and nuclear lysates sonicated for 6 cycles using a Bioruptor Pico (Diagenode). Immunoprecipitation was performed with 5x105 Jurkat cells, complemented with 10% of Drosophila chromatin from S2 cells as spike in control (Orlando et al. 2014). Antibody (1 ug) was added to each sample and immunoprecipitation performed overnight on a rotator at 4 °C. 20 uL of magnetic beads (Dynabeads protein G, Novex Life technologies) was added to each sample. After 5 washes with three different buffers according to the BLUEPRINT protocol (http://dcc.blueprint-epigenome.eu/#/md/methods). ChIP-bound fractions were extracted by incubation for 20 min at room temperature with elution buffer (1% SDS, 0.1M NaHCO3). Cross-linking was then reversed by incubation at 65°C. Proteinase K (10mg/mL) was added to eliminate protein from the samples. DNA was extracted using the QIAquick MinElute PCR purification kit (Qiagen) following manufacturer's instructions. ChIP-Seq libraries were generated with the MicroPlex Library Preparation Kit (Diagenode), according to the manufacturer instructions. The libraries were sequenced in paired-end 50+30 bp mode using the NextSeq® 500/550 (Illumina) according to manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305001893</ID>
          <LABEL>GSM5001893</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5001893</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5001894" accession="SRX9773879">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX9773879</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5001894</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5001894: Jurkat_H3K4me3_DMSO_Spike; Homo sapiens; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP300178" refname="GSE164184">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP300178</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS7961364">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS7961364</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5001894</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>ChIP was performed using anti-H3K4me3 (C15410003; Diagenode). 5x106 Jurkat cells were used for each treatment with PBIT (10 uM) or OICR-9429 (25 uM) for 5 hours. Briefly, cells were cross-linked with 1% formaldehyde for 10 min at room temperature before the reaction was quenched with 250 mM glycine. Cell pellets were washed twice with PBS and nuclear lysates sonicated for 6 cycles using a Bioruptor Pico (Diagenode). Immunoprecipitation was performed with 5x105 Jurkat cells, complemented with 10% of Drosophila chromatin from S2 cells as spike in control (Orlando et al. 2014). Antibody (1 ug) was added to each sample and immunoprecipitation performed overnight on a rotator at 4 °C. 20 uL of magnetic beads (Dynabeads protein G, Novex Life technologies) was added to each sample. After 5 washes with three different buffers according to the BLUEPRINT protocol (http://dcc.blueprint-epigenome.eu/#/md/methods). ChIP-bound fractions were extracted by incubation for 20 min at room temperature with elution buffer (1% SDS, 0.1M NaHCO3). Cross-linking was then reversed by incubation at 65°C. Proteinase K (10mg/mL) was added to eliminate protein from the samples. DNA was extracted using the QIAquick MinElute PCR purification kit (Qiagen) following manufacturer's instructions. ChIP-Seq libraries were generated with the MicroPlex Library Preparation Kit (Diagenode), according to the manufacturer instructions. The libraries were sequenced in paired-end 50+30 bp mode using the NextSeq® 500/550 (Illumina) according to manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305001894</ID>
          <LABEL>GSM5001894</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5001894</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5001895" accession="SRX9773880">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX9773880</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5001895</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5001895: Jurkat_Input; Homo sapiens; ChIP-Seq</TITLE>
    <STUDY_REF accession="SRP300178" refname="GSE164184">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP300178</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS7961366">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS7961366</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5001895</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>ChIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>ChIP</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>ChIP was performed using anti-H3K4me3 (C15410003; Diagenode). 5x106 Jurkat cells were used for each treatment with PBIT (10 uM) or OICR-9429 (25 uM) for 5 hours. Briefly, cells were cross-linked with 1% formaldehyde for 10 min at room temperature before the reaction was quenched with 250 mM glycine. Cell pellets were washed twice with PBS and nuclear lysates sonicated for 6 cycles using a Bioruptor Pico (Diagenode). Immunoprecipitation was performed with 5x105 Jurkat cells, complemented with 10% of Drosophila chromatin from S2 cells as spike in control (Orlando et al. 2014). Antibody (1 ug) was added to each sample and immunoprecipitation performed overnight on a rotator at 4 °C. 20 uL of magnetic beads (Dynabeads protein G, Novex Life technologies) was added to each sample. After 5 washes with three different buffers according to the BLUEPRINT protocol (http://dcc.blueprint-epigenome.eu/#/md/methods). ChIP-bound fractions were extracted by incubation for 20 min at room temperature with elution buffer (1% SDS, 0.1M NaHCO3). Cross-linking was then reversed by incubation at 65°C. Proteinase K (10mg/mL) was added to eliminate protein from the samples. DNA was extracted using the QIAquick MinElute PCR purification kit (Qiagen) following manufacturer's instructions. ChIP-Seq libraries were generated with the MicroPlex Library Preparation Kit (Diagenode), according to the manufacturer instructions. The libraries were sequenced in paired-end 50+30 bp mode using the NextSeq® 500/550 (Illumina) according to manufacturer's instructions.</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305001895</ID>
          <LABEL>GSM5001895</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5001895</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
