SRZ190804 PRJNA705464_analysis_files SRP308561 Objects include: ccRCC_6pat_Seurat.rds (Seurat object containing all cells, raw/normalized counts, and dimensionality reductions used in the analysis) ; ccRCC_6pat_cell_annotations.txt (annotations for all cells e.g. patient, tissue, cluster); ccRCC_6pat_TCRs.txt (all TCR clonotypes used in the analysis); bulk_multiregional_cohort_counts.csv (normalized counts for independent cohort of ccRCC patients receiving multiregional tumor and normal bulk RNA-seq); bulk_multiregional_cohort_metadata.csv (metadata for independent cohort of ccRCC patients receiving multiregional tumor and normal bulk RNA-seq); bulk_sortedpops_counts.csv (normalized counts for bulk RNA-seq of flow-sorted immune and CD45- populations from independent cohort of ccRCC patients); bulk_sortedpops_metadata.csv (metadata for bulk RNA-seq of flow-sorted immune and CD45- populations from independent cohort of ccRCC patients); README_file_descriptions.rtf (README for all supplemental items) 1 NULL