<?xml version="1.0" encoding="UTF-8"?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <STUDY center_name="GEO" alias="GSE167918" accession="SRP308588">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP308588</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA705495</EXTERNAL_ID>
      <EXTERNAL_ID namespace="GEO">GSE167918</EXTERNAL_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>Loss of function of MALAT1 on primary human OA osteoblast transcriptome</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Transcriptome Analysis"/>
      <STUDY_ABSTRACT>Cells: Primary human osteoblasts from subchondral bone of osteoarthritis patients (n=3 patients). Treatments: Cells transfected using Lipofectamine 3000 (Qiagen) with either control LNA (NC) or MALAT1 LNA1 or MALAT1 LNA2 for 24 hours. Total RNA extracted by Qiagen RNeasy columns. RIN values &gt;7 via Agilent Bioanalyser. Analysis: RNA subjected to Quantseq 3' RNA sequencing (Lexogen) and sequenced reads mapped to the hg38 reference human genome. Overall design: 9 samples analysed in total. Primary OA subchondral bone osteoblasts from n=3 patients transfected for 24h with either (i) LNA control, (ii) MALAT1 LNA1 or (iii) MALAT1 LNA2.</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>GSE167918</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
    <STUDY_LINKS>
      <STUDY_LINK>
        <XREF_LINK>
          <DB>pubmed</DB>
          <ID>33916321</ID>
        </XREF_LINK>
      </STUDY_LINK>
    </STUDY_LINKS>
  </STUDY>
</STUDY_SET>
