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    <TITLE>GSM5170162: BS2-mut-HSV-LO; Mus musculus; RNA-Seq</TITLE>
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    <TITLE>GSM5170163: BS3-mut-HSV-HI; Mus musculus; RNA-Seq</TITLE>
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        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
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        <PRIMARY_ID>SRP310405</PRIMARY_ID>
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          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170171</ID>
          <LABEL>GSM5170171</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170171</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170172" accession="SRX10331427">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331427</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170172</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170172: BS19-wt-HSV-LO; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451159">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451159</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170172</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170172</ID>
          <LABEL>GSM5170172</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170172</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170173" accession="SRX10331428">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331428</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170173</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170173: BS20-mut-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451161">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451161</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170173</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170173</ID>
          <LABEL>GSM5170173</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170173</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170174" accession="SRX10331429">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331429</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170174</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170174: BS21-mut-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451162">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451162</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170174</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170174</ID>
          <LABEL>GSM5170174</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170174</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170175" accession="SRX10331430">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331430</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170175</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170175: BS25-wt-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451163">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451163</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170175</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170175</ID>
          <LABEL>GSM5170175</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170175</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170176" accession="SRX10331431">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331431</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170176</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170176: BS27-mut-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451164">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451164</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170176</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170176</ID>
          <LABEL>GSM5170176</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170176</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170177" accession="SRX10331432">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331432</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170177</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170177: BS28-mut-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451165">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451165</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170177</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170177</ID>
          <LABEL>GSM5170177</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170177</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170178" accession="SRX10331433">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331433</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170178</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170178: BS29-wt-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451166">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451166</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170178</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170178</ID>
          <LABEL>GSM5170178</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170178</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170179" accession="SRX10331434">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331434</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170179</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170179: BS30-wt-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451167">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451167</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170179</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170179</ID>
          <LABEL>GSM5170179</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170179</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
  <EXPERIMENT alias="GSM5170180" accession="SRX10331435">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10331435</PRIMARY_ID>
      <SUBMITTER_ID namespace="GEO">GSM5170180</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>GSM5170180: BS31-wt-NI; Mus musculus; RNA-Seq</TITLE>
    <STUDY_REF accession="SRP310405" refname="GSE168799">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP310405</PRIMARY_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION/>
      <SAMPLE_DESCRIPTOR accession="SRS8451168">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8451168</PRIMARY_ID>
          <EXTERNAL_ID namespace="GEO">GSM5170180</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <PAIRED/>
        </LIBRARY_LAYOUT>
        <LIBRARY_CONSTRUCTION_PROTOCOL>Following transcardiac perfusion with 10 mL cold 1X PBS, brainstems were excised, flash frozen in liquid nitrogen, and transferred to 1 ml TRIzol reagent (Invitrogen) and homogenized at speed 6000 for 30 seconds with a MagNA Lyser Instrument (Roche). Total RNA was extracted as per the Invitrogen's standard protocol for TRIzol RNA extraction. RNA samples were further cleaned-up using the RNeasy Mini Kit (Qiagen #74104) and treated with DNase I, as per the manufacturer's standard protocol. RNA integrity was assessed using a Bioanalyzer RNA Pico kit (Agilent). rRNA depletion and library preparation was performed using the KAPA Stranded RNA-Seq kit (Roche).</LIBRARY_CONSTRUCTION_PROTOCOL>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 2500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
    <EXPERIMENT_LINKS>
      <EXPERIMENT_LINK>
        <XREF_LINK>
          <DB>gds</DB>
          <ID>305170180</ID>
          <LABEL>GSM5170180</LABEL>
        </XREF_LINK>
      </EXPERIMENT_LINK>
    </EXPERIMENT_LINKS>
    <EXPERIMENT_ATTRIBUTES>
      <EXPERIMENT_ATTRIBUTE>
        <TAG>GEO Accession</TAG>
        <VALUE>GSM5170180</VALUE>
      </EXPERIMENT_ATTRIBUTE>
    </EXPERIMENT_ATTRIBUTES>
  </EXPERIMENT>
</EXPERIMENT_SET>
