SRS8479086 SAMN18325520 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0091 User_sample_ID 91 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 3.57 Enteral_Energy 51.9 Enteral_Fat 2.96 Enteral_Protein 1.33 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 30 Parental_Fat 1.5 Parenteral_Carbohydrate 7.25 Parenteral_Energy 68.83 Parenteral_Protein 3 Ratio_enteral 45 Ratio_parenteral 55 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479087 SAMN18325522 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0093 User_sample_ID 93 Biomass_in_g 0.0263 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 81 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479088 SAMN18325525 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0096 User_sample_ID 96 Biomass_in_g 0.0283 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 22 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 5.55 Enteral_Energy 83.16 Enteral_Fat 4.59 Enteral_Protein 2.65 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 30 Parental_Fat 0.8 Parenteral_Carbohydrate 4.87 Parenteral_Energy 44.11 Parenteral_Protein 2 Ratio_enteral 62 Ratio_parenteral 38 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479089 SAMN18325524 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0095 User_sample_ID 95 Biomass_in_g 0.024 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 0.37487 Enteral_Energy 5.44 Enteral_Fat 0.31068 Enteral_Protein 0.14058 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1.63 Parenteral_Carbohydrate 5.59 Parenteral_Energy 56.78 Parenteral_Protein 2.04 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479090 SAMN18325521 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0092 User_sample_ID 92 Biomass_in_g 0.0269 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 5.18 Enteral_Energy 75.42 Enteral_Fat 4.3 Enteral_Protein 1.93 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 0.5 Parenteral_Carbohydrate 2.71 Parenteral_Energy 28.66 Parenteral_Protein 2 Ratio_enteral 63 Ratio_parenteral 37 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479091 SAMN18325523 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB46 JMF_sample_ID JMF-1906-2-0094 User_sample_ID 94 Biomass_in_g 0.0204 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 33 Birth_weight_in_g 865 Connatal_infection yes Days_in_hospital 100 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 2.76 Enteral_Energy 40.13 Enteral_Fat 2.29 Enteral_Protein 1.03 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2.5 Parenteral_Carbohydrate 7.31 Parenteral_Energy 81.18 Parenteral_Protein 3.5 Ratio_enteral 34 Ratio_parenteral 66 Tokolysis yes Tokolysis_days 1 Discharge_weight 3140 Discharge_length 50 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Standacillin/Zithromax LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479092 SAMN18325526 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0097 User_sample_ID 97 Biomass_in_g 0.0239 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 3 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 0.91931 Enteral_Energy 13.38 Enteral_Fat 0.7619 Enteral_Protein 0.34286 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 3 Parenteral_Carbohydrate 5 Parenteral_Energy 72.88 Parenteral_Protein 3.5 Ratio_enteral 11 Ratio_parenteral 89 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479093 SAMN18325538 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0109 User_sample_ID 109 Biomass_in_g 0.0218 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 68 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479094 SAMN18325539 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0110 User_sample_ID 110 Biomass_in_g 0.026 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 72 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479095 SAMN18325540 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0111 User_sample_ID 111 Biomass_in_g 0.0265 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 0.23543 Enteral_Energy 3.43 Enteral_Fat 0.19512 Enteral_Protein 0.0878 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 4.1 Parenteral_Energy 48.72 Parenteral_Protein 2.5 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479096 SAMN18325441 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0012 User_sample_ID 12 Biomass_in_g 0.0254 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 0.85172 Enteral_Energy 12.39 Enteral_Fat 0.70588 Enteral_Protein 0.31765 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 7.87 Parenteral_Energy 79.37 Parenteral_Protein 3.5 Ratio_enteral 9 Ratio_parenteral 91 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479097 SAMN18325542 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0113 User_sample_ID 113 Biomass_in_g 0.0281 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 16 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 5.51 Enteral_Energy 84.49 Enteral_Fat 4.55 Enteral_Protein 3.11 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 0.5 Parenteral_Carbohydrate 4.78 Parenteral_Energy 38.58 Parenteral_Protein 1.5 Ratio_enteral 57 Ratio_parenteral 43 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479098 SAMN18325541 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB46 JMF_sample_ID JMF-1906-2-0112 User_sample_ID 112 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 33 Birth_weight_in_g 865 Connatal_infection yes Days_in_hospital 100 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 3.81 Enteral_Energy 55.41 Enteral_Fat 3.16 Enteral_Protein 1.42 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 7.29 Parenteral_Energy 76.06 Parenteral_Protein 3.5 Ratio_enteral 46 Ratio_parenteral 54 Tokolysis yes Tokolysis_days 1 Discharge_weight 3140 Discharge_length 50 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Standacillin/Zithromax LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479099 SAMN18325543 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0114 User_sample_ID 114 Biomass_in_g 0.025 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Discharge_or_Death Discharge GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 70 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479100 SAMN18325759 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0330 User_sample_ID 330 Biomass_in_g 0.025 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 96 Discharge_or_Death Discharge Enteral_Carbohydrate 5.72 Enteral_Energy 87.66 Enteral_Fat 4.72 Enteral_Protein 3.23 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Parental_Fat 0.5 Parenteral_Carbohydrate 3.73 Parenteral_Energy 30.49 Parenteral_Protein 1 Ratio_enteral 71 Ratio_parenteral 29 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479101 SAMN18325463 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0034 User_sample_ID 34 Biomass_in_g 0.0238 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 65 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479102 SAMN18325760 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0331 User_sample_ID 331 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 86 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479103 SAMN18325761 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0332 User_sample_ID 332 Biomass_in_g 0.0224 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 70 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479104 SAMN18325762 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0333 User_sample_ID 333 Biomass_in_g 0.021 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 10 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 2.63 Enteral_Energy 38.22 Enteral_Fat 2.18 Enteral_Protein 0.97959 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 4.32 Parenteral_Energy 62.98 Parenteral_Protein 4.5 Ratio_enteral 25 Ratio_parenteral 75 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479105 SAMN18325763 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0334 User_sample_ID 334 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 3 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 0.82738 Enteral_Energy 12.04 Enteral_Fat 0.68571 Enteral_Protein 0.30857 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2.5 Parenteral_Carbohydrate 6 Parenteral_Energy 71.62 Parenteral_Protein 3 Ratio_enteral 10 Ratio_parenteral 90 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479106 SAMN18325764 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0335 User_sample_ID 335 Biomass_in_g 0.0283 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 80 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479107 SAMN18325839 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0410 User_sample_ID 410 Biomass_in_g 0.0214 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 19 Discharge_or_Death Discharge DNA_extraction_batch batch 18 Enteral_Carbohydrate 7.12 Enteral_Energy 109.16 Enteral_Fat 5.88 Enteral_Protein 4.02 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0.5 Parenteral_Carbohydrate 4.22 Parenteral_Energy 33.32 Parenteral_Protein 1 Ratio_enteral 73 Ratio_parenteral 27 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479108 SAMN18325471 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0042 User_sample_ID 42 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 46 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479109 SAMN18325840 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB26 JMF_sample_ID JMF-1906-2-0411 User_sample_ID 411 Biomass_in_g 0.0231 Birth_head_circumference_in_cm 22 Birth_length_in_cm 31.5 Birth_weight_in_g 615 Connatal_infection no Days_in_hospital 88 Days_of_life 27 Discharge_or_Death Discharge DNA_extraction_batch batch 18 Enteral_Carbohydrate 7.03 Enteral_Energy 107.88 Enteral_Fat 5.81 Enteral_Protein 3.98 GA 26+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0 Parenteral_Carbohydrate 2.3 Parenteral_Energy 17.29 Parenteral_Protein 1 Ratio_enteral 77 Ratio_parenteral 23 Tokolysis no Tokolysis_days 0 Discharge_weight 2390 Discharge_length 44 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.31 m_leukocytes 21 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479110 SAMN18325841 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0412 User_sample_ID 412 Biomass_in_g 0.0266 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 18 Enteral_Carbohydrate 1.51 Enteral_Energy 22.03 Enteral_Fat 1.25 Enteral_Protein 0.56471 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 3 Parenteral_Carbohydrate 6.61 Parenteral_Energy 80.22 Parenteral_Protein 3 Ratio_enteral 15 Ratio_parenteral 85 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479111 SAMN18325842 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0413 User_sample_ID 413 Biomass_in_g 0.0264 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479112 SAMN18325843 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB24 JMF_sample_ID JMF-1906-2-0414 User_sample_ID 414 Biomass_in_g 0.0224 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 830 Connatal_infection no Days_in_hospital 88 Days_of_life 78 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 25+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 2855 Discharge_length 46 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.69 m_leukocytes 23 m_antibiotics none LM complete Apg5 7 Apg10 7 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479113 SAMN18325844 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB25 JMF_sample_ID JMF-1906-2-0415 User_sample_ID 415 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 860 Connatal_infection yes Days_in_hospital 70 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 26+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Discharge_weight 2082 Discharge_length 41 Discharge_head_circumference 28 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1.56 m_leukocytes 15 m_antibiotics Standacillin LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479114 SAMN18325527 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0098 User_sample_ID 98 Biomass_in_g 0.0213 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 46 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479115 SAMN18325528 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0099 User_sample_ID 99 Biomass_in_g 0.021 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 58 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 50 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479116 SAMN18325529 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0100 User_sample_ID 100 Biomass_in_g 0.0239 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 55 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479117 SAMN18325953 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0524 User_sample_ID 524 Biomass_in_g 0.02 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 98 Discharge_or_Death Discharge GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479118 SAMN18325954 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0525 User_sample_ID 525 DNA_extraction_batch batch x_2017_2 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479119 SAMN18325430 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0001 User_sample_ID 1 Biomass_in_g 0.024 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 17 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 5.17 Enteral_Energy 75.2 Enteral_Fat 4.28 Enteral_Protein 1.93 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0.5 Parenteral_Carbohydrate 2.88 Parenteral_Energy 30.81 Parenteral_Protein 2.3 Ratio_enteral 49 Ratio_parenteral 51 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479120 SAMN18325956 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB09 JMF_sample_ID JMF-1906-2-0527 User_sample_ID 527 Biomass_in_g 0.029 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 34.5 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 42 Days_of_life 7 Discharge_or_Death Discharge Enteral_Carbohydrate 2.73 Enteral_Energy 39.65 Enteral_Fat 2.26 Enteral_Protein 1.02 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 7.78 Parenteral_Energy 83.86 Parenteral_Protein 3.5 Ratio_enteral 30 Ratio_parenteral 70 Tokolysis yes Tokolysis_days 2 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479121 SAMN18325955 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB09 JMF_sample_ID JMF-1906-2-0526 User_sample_ID 526 Biomass_in_g 0.03 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 34.5 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 42 Days_of_life 2 Discharge_or_Death Discharge Enteral_Carbohydrate 0.21215 Enteral_Energy 3.09 Enteral_Fat 0.17582 Enteral_Protein 0.07912 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 5 Parenteral_Energy 60.85 Parenteral_Protein 3 Ratio_enteral 3 Ratio_parenteral 97 Tokolysis yes Tokolysis_days 2 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479122 SAMN18325704 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0275 User_sample_ID 275 Biomass_in_g 0.0267 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 75 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479123 SAMN18325703 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0274 User_sample_ID 274 Biomass_in_g 0.023 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 60 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity early O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479124 SAMN18325705 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0276 User_sample_ID 276 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 25 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479125 SAMN18325706 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB31 JMF_sample_ID JMF-1906-2-0277 User_sample_ID 277 Biomass_in_g 0.024 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33.5 Birth_weight_in_g 975 Connatal_infection no Days_in_hospital 57 Days_of_life 31 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 27+5 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Discharge_weight 2046 Discharge_length 42.5 Discharge_head_circumference 25 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.98 m_leukocytes 17.33 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479126 SAMN18325707 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0278 User_sample_ID 278 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 79 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 6.94 Enteral_Energy 92.52 Enteral_Fat 4.65 Enteral_Protein 2.74 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Parental_Fat 1.5 Parenteral_Carbohydrate 1.08 Parenteral_Energy 26.26 Parenteral_Protein 1.25 Ratio_enteral 75 Ratio_parenteral 25 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479127 SAMN18325708 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0279 User_sample_ID 279 Biomass_in_g 0.0255 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 11 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 3.51 Enteral_Energy 51.07 Enteral_Fat 2.91 Enteral_Protein 1.31 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 3 Parenteral_Carbohydrate 7.31 Parenteral_Energy 86.19 Parenteral_Protein 3.5 Ratio_enteral 38 Ratio_parenteral 62 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479128 SAMN18325957 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB09 JMF_sample_ID JMF-1906-2-0528 User_sample_ID 528 Biomass_in_g 0.026 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 34.5 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 42 Days_of_life 15 Discharge_or_Death Discharge Enteral_Carbohydrate 5.66 Enteral_Energy 86.75 Enteral_Fat 4.67 Enteral_Protein 3.2 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 1 Parenteral_Carbohydrate 4.54 Parenteral_Energy 40.2 Parenteral_Protein 1 Ratio_enteral 58 Ratio_parenteral 42 Tokolysis yes Tokolysis_days 2 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479129 SAMN18325958 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB09 JMF_sample_ID JMF-1906-2-0529 User_sample_ID 529 Biomass_in_g 0.022 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 34.5 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 42 Days_of_life 38 Discharge_or_Death Discharge GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity maturing O2_max_at_birth 70 Tokolysis yes Tokolysis_days 2 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479130 SAMN18325959 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB09 JMF_sample_ID JMF-1906-2-0530 User_sample_ID 530 Biomass_in_g 0.027 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 34.5 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 42 Days_of_life 52 Discharge_or_Death Discharge GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity maturing O2_max_at_birth 70 Tokolysis yes Tokolysis_days 2 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479131 SAMN18325483 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0054 User_sample_ID 54 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 64 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479132 SAMN18325960 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB09 JMF_sample_ID JMF-1906-2-0531 User_sample_ID 531 Biomass_in_g 0.006 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 34.5 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 42 Days_of_life 66 Discharge_or_Death Discharge GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity maturing O2_max_at_birth 70 Tokolysis yes Tokolysis_days 2 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479133 SAMN18325961 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB25 JMF_sample_ID JMF-1906-2-0532 User_sample_ID 532 Biomass_in_g 0.0228 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 860 Connatal_infection yes Days_in_hospital 70 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 1.54 Enteral_Energy 22.34 Enteral_Fat 1.27 Enteral_Protein 0.57273 GA 26+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 6.04 Parenteral_Energy 66.9 Parenteral_Protein 3 Ratio_enteral 19 Ratio_parenteral 81 Tokolysis no Tokolysis_days 0 Discharge_weight 2082 Discharge_length 41 Discharge_head_circumference 28 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1.56 m_leukocytes 15 m_antibiotics Standacillin LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479134 SAMN18325709 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB31 JMF_sample_ID JMF-1906-2-0280 User_sample_ID 280 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33.5 Birth_weight_in_g 975 Connatal_infection no Days_in_hospital 57 Days_of_life 22 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 27+5 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Discharge_weight 2046 Discharge_length 42.5 Discharge_head_circumference 25 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.98 m_leukocytes 17.33 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479135 SAMN18325440 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0011 User_sample_ID 11 Biomass_in_g 0.0238 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 45 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479136 SAMN18325531 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0102 User_sample_ID 102 Biomass_in_g 0.0232 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 62 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479137 SAMN18325431 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0002 User_sample_ID 2 Biomass_in_g 0.025 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 1.54 Enteral_Energy 22.38 Enteral_Fat 1.27 Enteral_Protein 0.57371 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 2.5 Parenteral_Carbohydrate 8.73 Parenteral_Energy 87.36 Parenteral_Protein 3 Ratio_enteral 19 Ratio_parenteral 81 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479138 SAMN18325530 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0101 User_sample_ID 101 Biomass_in_g 0.0269 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 2.86 Enteral_Energy 41.61 Enteral_Fat 2.37 Enteral_Protein 1.07 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2.5 Parenteral_Carbohydrate 6.79 Parenteral_Energy 74.2 Parenteral_Protein 2.5 Ratio_enteral 33 Ratio_parenteral 67 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479139 SAMN18325532 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0103 User_sample_ID 103 Biomass_in_g 0.0221 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 55 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479140 SAMN18325533 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0104 User_sample_ID 104 Biomass_in_g 0.0231 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 11 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 4.67 Enteral_Energy 68 Enteral_Fat 3.87 Enteral_Protein 1.74 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 30 Parental_Fat 1.5 Parenteral_Carbohydrate 4.25 Parenteral_Energy 46.72 Parenteral_Protein 1.8 Ratio_enteral 60 Ratio_parenteral 40 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479141 SAMN18325458 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0029 User_sample_ID 29 Biomass_in_g 0.027 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 53 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479142 SAMN18325710 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0281 User_sample_ID 281 Biomass_in_g 0.0203 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 4.32 Enteral_Energy 62.81 Enteral_Fat 3.58 Enteral_Protein 1.61 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1 Parenteral_Carbohydrate 4.58 Parenteral_Energy 46.47 Parenteral_Protein 2.5 Ratio_enteral 50 Ratio_parenteral 50 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479143 SAMN18325711 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB31 JMF_sample_ID JMF-1906-2-0282 User_sample_ID 282 Biomass_in_g 0.0266 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33.5 Birth_weight_in_g 975 Connatal_infection no Days_in_hospital 57 Days_of_life 18 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 27+5 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Discharge_weight 2046 Discharge_length 42.5 Discharge_head_circumference 25 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.98 m_leukocytes 17.33 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479144 SAMN18325712 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0283 User_sample_ID 283 DNA_extraction_batch batch 10 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479145 SAMN18325713 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0284 User_sample_ID 284 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 4.15 Enteral_Energy 60.4 Enteral_Fat 3.44 Enteral_Protein 1.55 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 2.5 Parenteral_Carbohydrate 5.25 Parenteral_Energy 67.34 Parenteral_Protein 3 Ratio_enteral 48 Ratio_parenteral 52 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479146 SAMN18325714 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0285 User_sample_ID 285 Biomass_in_g 0.0292 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 80 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479147 SAMN18325715 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0286 User_sample_ID 286 Biomass_in_g 0.0233 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 1.33 Enteral_Energy 19.4 Enteral_Fat 1.11 Enteral_Protein 0.49741 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2 Parenteral_Carbohydrate 6 Parenteral_Energy 66.6 Parenteral_Protein 3 Ratio_enteral 16 Ratio_parenteral 84 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479148 SAMN18325962 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0533 User_sample_ID 533 Biomass_in_g 0.0221 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 0 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 0.197 Enteral_Energy 2.87 Enteral_Fat 0.16327 Enteral_Protein 0.07347 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 45 Parental_Fat 1 Parenteral_Carbohydrate 4.5 Parenteral_Energy 43.94 Parenteral_Protein 2 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479149 SAMN18325963 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0534 User_sample_ID 534 Biomass_in_g 0.0245 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 3.31 Enteral_Energy 48.15 Enteral_Fat 2.74 Enteral_Protein 1.23 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 4.05 Parenteral_Energy 50.45 Parenteral_Protein 3 Ratio_enteral 36 Ratio_parenteral 64 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479150 SAMN18325964 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0535 User_sample_ID 535 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 3.44 Enteral_Energy 50.09 Enteral_Fat 2.85 Enteral_Protein 1.28 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 1.8 Parenteral_Energy 46.46 Parenteral_Protein 4 Ratio_enteral 41 Ratio_parenteral 59 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479152 SAMN18325966 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0537 User_sample_ID 537 DNA_extraction_batch batch 22 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479153 SAMN18325967 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0538 User_sample_ID 538 Biomass_in_g 0.0294 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 1.17 Enteral_Energy 17.02 Enteral_Fat 0.9697 Enteral_Protein 0.43636 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 2.5 Parenteral_Carbohydrate 5.86 Parenteral_Energy 72.86 Parenteral_Protein 3.5 Ratio_enteral 12 Ratio_parenteral 88 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479154 SAMN18325968 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0539 User_sample_ID 539 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 1.35 Enteral_Energy 19.57 Enteral_Fat 1.11 Enteral_Protein 0.50174 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 30 Parental_Fat 1.5 Parenteral_Carbohydrate 7.42 Parenteral_Energy 73.79 Parenteral_Protein 4 Ratio_enteral 15 Ratio_parenteral 85 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479155 SAMN18325716 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0287 User_sample_ID 287 Biomass_in_g 0.0247 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 11 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 4.1 Enteral_Energy 59.58 Enteral_Fat 3.39 Enteral_Protein 1.53 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 3 Parenteral_Carbohydrate 7.36 Parenteral_Energy 84.51 Parenteral_Protein 3 Ratio_enteral 45 Ratio_parenteral 55 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479156 SAMN18325718 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0289 User_sample_ID 289 Biomass_in_g 0.0237 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 16 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 4.15 Enteral_Energy 60.4 Enteral_Fat 3.44 Enteral_Protein 1.55 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 3 Parenteral_Carbohydrate 5.75 Parenteral_Energy 77.23 Parenteral_Protein 3.5 Ratio_enteral 48 Ratio_parenteral 52 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479157 SAMN18325717 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0288 User_sample_ID 288 Biomass_in_g 0.0281 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 76 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 8.57 Enteral_Energy 102.79 Enteral_Fat 4.32 Enteral_Protein 2.84 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0 Parenteral_Carbohydrate 2 Parenteral_Energy 15.51 Parenteral_Protein 1 Ratio_enteral 77 Ratio_parenteral 23 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479158 SAMN18325719 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0290 User_sample_ID 290 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 68 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479159 SAMN18325459 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0030 User_sample_ID 30 Biomass_in_g 0.0231 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 1.82 Enteral_Energy 26.44 Enteral_Fat 1.51 Enteral_Protein 0.67765 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 30 Parental_Fat 2.5 Parenteral_Carbohydrate 6.5 Parenteral_Energy 74.5 Parenteral_Protein 3 Ratio_enteral 24 Ratio_parenteral 76 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479160 SAMN18325720 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0291 User_sample_ID 291 Biomass_in_g 0.0293 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 2.17 Enteral_Energy 31.6 Enteral_Fat 1.8 Enteral_Protein 0.81 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 2 Parenteral_Carbohydrate 7.29 Parenteral_Energy 76.08 Parenteral_Protein 3.5 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479161 SAMN18325721 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0292 User_sample_ID 292 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479162 SAMN18325484 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0055 User_sample_ID 55 Biomass_in_g 0.0284 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 3.09 Enteral_Energy 44.94 Enteral_Fat 2.56 Enteral_Protein 1.15 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1 Parenteral_Carbohydrate 7.82 Parenteral_Energy 69.06 Parenteral_Protein 3.5 Ratio_enteral 35 Ratio_parenteral 65 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479163 SAMN18325970 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0541 User_sample_ID 541 Biomass_in_g 0.0263 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 0.24132 Enteral_Energy 3.51 Enteral_Fat 0.2 Enteral_Protein 0.09 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 5.3 Parenteral_Energy 60.62 Parenteral_Protein 2.5 Ratio_enteral 3 Ratio_parenteral 97 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479164 SAMN18325969 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0540 User_sample_ID 540 Biomass_in_g 0.0201 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 1.67 Enteral_Energy 24.35 Enteral_Fat 1.39 Enteral_Protein 0.62405 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 3 Parenteral_Carbohydrate 4 Parenteral_Energy 67.12 Parenteral_Protein 3.5 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479165 SAMN18325971 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0542 User_sample_ID 542 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 1.17 Enteral_Energy 17.04 Enteral_Fat 0.97338 Enteral_Protein 0.44046 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 9.67 Parenteral_Energy 89.76 Parenteral_Protein 3.5 Ratio_enteral 14 Ratio_parenteral 86 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479151 SAMN18325965 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0536 User_sample_ID 536 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 65 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 30 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479166 SAMN18325972 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0543 User_sample_ID 543 Biomass_in_g 0.0255 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 0.25072 Enteral_Energy 3.65 Enteral_Fat 0.20779 Enteral_Protein 0.09351 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1.5 Parenteral_Carbohydrate 5.5 Parenteral_Energy 56.71 Parenteral_Protein 2.5 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479167 SAMN18325973 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0544 User_sample_ID 544 Biomass_in_g 0.0266 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 2.09 Enteral_Energy 30.48 Enteral_Fat 1.74 Enteral_Protein 0.78119 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1.2 Parenteral_Carbohydrate 5.18 Parenteral_Energy 55.15 Parenteral_Protein 3.3 Ratio_enteral 23 Ratio_parenteral 77 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479168 SAMN18325974 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0545 User_sample_ID 545 Biomass_in_g 0.0228 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 0.76458 Enteral_Energy 11.12 Enteral_Fat 0.63366 Enteral_Protein 0.28515 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1 Parenteral_Carbohydrate 4 Parenteral_Energy 43.06 Parenteral_Protein 2.5 Ratio_enteral 8 Ratio_parenteral 92 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479169 SAMN18325561 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0132 User_sample_ID 132 DNA_extraction_batch batch 05 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479170 SAMN18325562 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0133 User_sample_ID 133 Biomass_in_g 0.0207 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479171 SAMN18325564 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0135 User_sample_ID 135 Biomass_in_g 0.0264 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479172 SAMN18325563 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0134 User_sample_ID 134 Biomass_in_g 0.0225 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Days_of_life 32 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 6.68 Enteral_Energy 100.04 Enteral_Fat 5.53 Enteral_Protein 3.19 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Parental_Fat 0 Parenteral_Carbohydrate 2.15 Parenteral_Energy 16.38 Parenteral_Protein 1 Ratio_enteral 82 Ratio_parenteral 18 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479173 SAMN18325566 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0137 User_sample_ID 137 Biomass_in_g 0.0285 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 72 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 80 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479174 SAMN18325565 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0136 User_sample_ID 136 Biomass_in_g 0.0265 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Days_of_life 63 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479175 SAMN18325567 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0138 User_sample_ID 138 Biomass_in_g 0.0244 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 0.64352 Enteral_Energy 9.36 Enteral_Fat 0.53333 Enteral_Protein 0.24 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0.5 Parenteral_Carbohydrate 3 Parenteral_Energy 36.29 Parenteral_Protein 3.5 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479176 SAMN18325611 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0182 User_sample_ID 182 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 3.44 Enteral_Energy 50.09 Enteral_Fat 2.85 Enteral_Protein 1.28 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 1.8 Parenteral_Energy 46.46 Parenteral_Protein 4 Ratio_enteral 41 Ratio_parenteral 59 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479177 SAMN18325612 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0183 User_sample_ID 183 Biomass_in_g 0.0227 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 0.51827 Enteral_Energy 7.54 Enteral_Fat 0.42953 Enteral_Protein 0.19329 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 2 Parenteral_Carbohydrate 6 Parenteral_Energy 66.6 Parenteral_Protein 3 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479178 SAMN18325613 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0184 User_sample_ID 184 Biomass_in_g 0.0245 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 5.78 Enteral_Energy 84.16 Enteral_Fat 4.79 Enteral_Protein 2.16 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 0 Parenteral_Carbohydrate 3.29 Parenteral_Energy 26.98 Parenteral_Protein 2 Ratio_enteral 70 Ratio_parenteral 30 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479179 SAMN18325614 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB36 JMF_sample_ID JMF-1906-2-0185 User_sample_ID 185 Biomass_in_g 0.0245 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33 Birth_weight_in_g 780 Connatal_infection no Days_in_hospital 68 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge O2_max_at_birth 35 Tokolysis no Tokolysis_days 0 Discharge_weight 2084 Discharge_length 41 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.2 m_leukocytes 13.25 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479180 SAMN18325615 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0186 User_sample_ID 186 Biomass_in_g 0.0203 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 47 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479181 SAMN18325616 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0187 User_sample_ID 187 Biomass_in_g 0.0211 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 1.18 Enteral_Energy 17.15 Enteral_Fat 0.9771 Enteral_Protein 0.43969 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 2.5 Parenteral_Carbohydrate 6 Parenteral_Energy 73.62 Parenteral_Protein 3.5 Ratio_enteral 13 Ratio_parenteral 87 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479182 SAMN18325722 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0293 User_sample_ID 293 Biomass_in_g 0.0207 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 10 Enteral_Carbohydrate 0.64893 Enteral_Energy 9.41 Enteral_Fat 0.53782 Enteral_Protein 0.24336 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 3.54 Parenteral_Energy 57.51 Parenteral_Protein 3 Ratio_enteral 7 Ratio_parenteral 93 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479183 SAMN18325723 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0294 User_sample_ID 294 DNA_extraction_batch batch xy2 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479184 SAMN18325725 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0296 User_sample_ID 296 Biomass_in_g 0.0285 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 51 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 80 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479185 SAMN18325724 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0295 User_sample_ID 295 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 1.17 Enteral_Energy 17.04 Enteral_Fat 0.97338 Enteral_Protein 0.44046 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 9.67 Parenteral_Energy 89.76 Parenteral_Protein 3.5 Ratio_enteral 14 Ratio_parenteral 86 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479186 SAMN18325726 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB55 JMF_sample_ID JMF-1906-2-0297 User_sample_ID 297 Biomass_in_g 0.028 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34.5 Birth_weight_in_g 830 Connatal_infection yes Days_in_hospital 8 Days_of_life 4 Discharge_or_Death Death DNA_extraction_batch batch 09 Enteral_Carbohydrate 1.63 Enteral_Energy 23.62 Enteral_Fat 1.35 Enteral_Protein 0.6106 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin yes Last_mode_of_ventilation Death Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2.5 Parenteral_Carbohydrate 6 Parenteral_Energy 71.62 Parenteral_Protein 3 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479187 SAMN18325728 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale Test sample env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0299 User_sample_ID 299 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479188 SAMN18325727 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0298 User_sample_ID 298 Biomass_in_g 0.0228 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 0.36085 Enteral_Energy 5.23 Enteral_Fat 0.29907 Enteral_Protein 0.13533 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1.8 Parenteral_Carbohydrate 4.47 Parenteral_Energy 51.63 Parenteral_Protein 1.96 Ratio_enteral 5 Ratio_parenteral 95 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479189 SAMN18325975 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0546 User_sample_ID 546 Biomass_in_g 0.0227 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 0.34911 Enteral_Energy 5.08 Enteral_Fat 0.28933 Enteral_Protein 0.1302 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 30 Parental_Fat 1.5 Parenteral_Carbohydrate 4.8 Parenteral_Energy 50.68 Parenteral_Protein 2 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479190 SAMN18325976 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0547 User_sample_ID 547 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 33 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 4 Parenteral_Carbohydrate 8.96 Parenteral_Energy 107.78 Parenteral_Protein 4 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479191 SAMN18325585 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0156 User_sample_ID 156 Biomass_in_g 0.0248 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 28 Discharge_or_Death Discharge DNA_extraction_batch batch 12 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479192 SAMN18325466 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0037 User_sample_ID 37 Biomass_in_g 0.0212 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 28 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 80 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479193 SAMN18325792 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB12 JMF_sample_ID JMF-1906-2-0363 User_sample_ID 363 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 83 Days_of_life 68 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 26+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 2425 Discharge_length 44 Discharge_head_circumference 31.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479194 SAMN18325790 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB17 JMF_sample_ID JMF-1906-2-0361 User_sample_ID 361 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 34 Birth_weight_in_g 703 Connatal_infection yes Days_in_hospital 68 Days_of_life 26 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 7.43 Enteral_Energy 113.91 Enteral_Fat 6.13 Enteral_Protein 4.2 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 0 Parenteral_Carbohydrate 4.74 Parenteral_Energy 31.28 Parenteral_Protein 1 Ratio_enteral 79 Ratio_parenteral 21 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 3164 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479195 SAMN18325791 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0362 User_sample_ID 362 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 46 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 3.59 Enteral_Energy 52.26 Enteral_Fat 2.98 Enteral_Protein 1.34 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1.2 Parenteral_Carbohydrate 6.66 Parenteral_Energy 61.61 Parenteral_Protein 2.8 Ratio_enteral 47 Ratio_parenteral 53 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479196 SAMN18325793 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0364 User_sample_ID 364 DNA_extraction_batch batch 17 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479197 SAMN18325794 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB31 JMF_sample_ID JMF-1906-2-0365 User_sample_ID 365 Biomass_in_g 0.0132 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33.5 Birth_weight_in_g 975 Connatal_infection no Days_in_hospital 57 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 0.39805 Enteral_Energy 5.79 Enteral_Fat 0.3299 Enteral_Protein 0.14845 GA 27+5 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 6 Parenteral_Energy 61.59 Parenteral_Protein 3 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis no Discharge_weight 2046 Discharge_length 42.5 Discharge_head_circumference 25 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.98 m_leukocytes 17.33 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479198 SAMN18325871 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0442 User_sample_ID 442 Biomass_in_g 0.0254 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 70 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479199 SAMN18325870 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0441 User_sample_ID 441 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 39 Discharge_or_Death Discharge DNA_extraction_batch batch 21 Enteral_Carbohydrate 9.01 Enteral_Energy 139.1 Enteral_Fat 7.51 Enteral_Protein 5.14 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Parental_Fat 0 Parenteral_Carbohydrate 0.24542 Parenteral_Energy 1.43 Parenteral_Protein 0 Ratio_enteral 91 Ratio_parenteral 9 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479200 SAMN18325872 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0443 User_sample_ID 443 Biomass_in_g 0.0269 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 75 Discharge_or_Death Discharge DNA_extraction_batch batch 21 Enteral_Carbohydrate 5.11 Enteral_Energy 78.96 Enteral_Fat 4.26 Enteral_Protein 2.92 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 4.12 Parenteral_Energy 43.59 Parenteral_Protein 1.2 Ratio_enteral 53 Ratio_parenteral 47 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479201 SAMN18325873 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB24 JMF_sample_ID JMF-1906-2-0444 User_sample_ID 444 Biomass_in_g 0.0296 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 830 Connatal_infection no Days_in_hospital 88 Days_of_life 3 Discharge_or_Death Discharge DNA_extraction_batch batch 21 Enteral_Carbohydrate 0.48875 Enteral_Energy 7.11 Enteral_Fat 0.40506 Enteral_Protein 0.18228 GA 25+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 7 Parenteral_Energy 72.37 Parenteral_Protein 3 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis yes Tokolysis_days 2 Discharge_weight 2855 Discharge_length 46 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.69 m_leukocytes 23 m_antibiotics none LM complete Apg5 7 Apg10 7 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479202 SAMN18325874 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB60 JMF_sample_ID JMF-1906-2-0445 User_sample_ID 445 Biomass_in_g 0.0241 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32.5 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 100 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 25+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge O2_max_at_birth 50 Tokolysis yes Discharge_weight 3020 Discharge_length 48 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Spontan pPROM 1 m_CRP 0.05 m_leukocytes 7 m_antibiotics Standacillin/Clindamycin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479203 SAMN18325875 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0446 User_sample_ID 446 Biomass_in_g 0.0287 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 122 Discharge_or_Death Discharge DNA_extraction_batch batch 21 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479204 SAMN18325649 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0220 User_sample_ID 220 Biomass_in_g 0.026 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 0.30165 Enteral_Energy 4.39 Enteral_Fat 0.25 Enteral_Protein 0.1125 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 6 Parenteral_Energy 66.6 Parenteral_Protein 3 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479205 SAMN18325452 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0023 User_sample_ID 23 Biomass_in_g 0.0267 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 19 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 1.13 Enteral_Energy 16.39 Enteral_Fat 0.93659 Enteral_Protein 0.4238 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Parental_Fat 3.5 Parenteral_Carbohydrate 8.23 Parenteral_Energy 94.49 Parenteral_Protein 3 Ratio_enteral 15 Ratio_parenteral 85 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479206 SAMN18325650 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0221 User_sample_ID 221 Biomass_in_g 0.0224 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479207 SAMN18325651 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0222 User_sample_ID 222 Biomass_in_g 0.0298 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 4.29 Enteral_Energy 62.42 Enteral_Fat 3.56 Enteral_Protein 1.6 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early Parental_Fat 1 Parenteral_Carbohydrate 6.26 Parenteral_Energy 58.09 Parenteral_Protein 3 Ratio_enteral 52 Ratio_parenteral 48 Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479208 SAMN18325652 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0223 User_sample_ID 223 Biomass_in_g 0.0204 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 0.93603 Enteral_Energy 13.62 Enteral_Fat 0.77576 Enteral_Protein 0.34909 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early Parental_Fat 3 Parenteral_Carbohydrate 10.09 Parenteral_Energy 102.2 Parenteral_Protein 3.5 Ratio_enteral 11 Ratio_parenteral 89 Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479209 SAMN18325796 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0367 User_sample_ID 367 Biomass_in_g 0.024 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 84 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479210 SAMN18325653 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0224 User_sample_ID 224 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 84 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 4 Parenteral_Carbohydrate 9.39 Parenteral_Energy 110.19 Parenteral_Protein 4 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479211 SAMN18325798 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0369 User_sample_ID 369 Biomass_in_g 0.0241 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479212 SAMN18325797 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0368 User_sample_ID 368 Biomass_in_g 0.0213 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 69 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479213 SAMN18325467 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0038 User_sample_ID 38 Biomass_in_g 0.0263 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 19 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 5.51 Enteral_Energy 82.58 Enteral_Fat 4.56 Enteral_Protein 2.64 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1 Parenteral_Carbohydrate 3.87 Parenteral_Energy 40.33 Parenteral_Protein 2 Ratio_enteral 58 Ratio_parenteral 42 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479214 SAMN18325799 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0370 User_sample_ID 370 Biomass_in_g 0.0224 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 70 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479215 SAMN18325795 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0366 User_sample_ID 366 Biomass_in_g 0.0267 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 5.94 Enteral_Energy 91.16 Enteral_Fat 4.91 Enteral_Protein 3.36 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 0 Parenteral_Carbohydrate 4.23 Parenteral_Energy 30.39 Parenteral_Protein 1.5 Ratio_enteral 56 Ratio_parenteral 44 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479216 SAMN18325648 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0219 User_sample_ID 219 Biomass_in_g 0.021 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 22 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479217 SAMN18325800 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0371 User_sample_ID 371 Biomass_in_g 0.0211 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479218 SAMN18325801 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0372 User_sample_ID 372 Biomass_in_g 0.0223 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 101 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 0.0028 Enteral_Energy 37.24 Enteral_Fat 0.00188 Enteral_Protein 999.13 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 100 Parental_Fat 1 Parenteral_Carbohydrate 5 Parenteral_Energy 46.81 Parenteral_Protein 2 Ratio_enteral 47 Ratio_parenteral 53 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479219 SAMN18325876 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0447 User_sample_ID 447 Biomass_in_g 0.0232 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 0.30644 Enteral_Energy 4.46 Enteral_Fat 0.25397 Enteral_Protein 0.11429 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1.6 Parenteral_Carbohydrate 6.5 Parenteral_Energy 63.47 Parenteral_Protein 2.5 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479220 SAMN18325878 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB60 JMF_sample_ID JMF-1906-2-0449 User_sample_ID 449 Biomass_in_g 0.0262 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32.5 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 100 Days_of_life 65 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 25+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Discharge_weight 3020 Discharge_length 48 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Spontan pPROM 1 m_CRP 0.05 m_leukocytes 7 m_antibiotics Standacillin/Clindamycin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479221 SAMN18325877 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0448 User_sample_ID 448 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 92 Discharge_or_Death Discharge DNA_extraction_batch batch 21 Enteral_Carbohydrate 8.14 Enteral_Energy 10.39 Enteral_Fat 4.86 Enteral_Protein 3.53 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 4.09 Parenteral_Energy 48.61 Parenteral_Protein 2.5 Ratio_enteral 69 Ratio_parenteral 31 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479222 SAMN18325879 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB60 JMF_sample_ID JMF-1906-2-0450 User_sample_ID 450 Biomass_in_g 0.0225 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32.5 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 100 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 20 Enteral_Carbohydrate 2.24 Enteral_Energy 32.47 Enteral_Fat 1.86 Enteral_Protein 0.83942 GA 25+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 3 Parenteral_Carbohydrate 5.34 Parenteral_Energy 74.89 Parenteral_Protein 3.5 Ratio_enteral 26 Ratio_parenteral 74 Tokolysis yes Discharge_weight 3020 Discharge_length 48 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Spontan pPROM 1 m_CRP 0.05 m_leukocytes 7 m_antibiotics Standacillin/Clindamycin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479223 SAMN18325880 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0451 User_sample_ID 451 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 43 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479224 SAMN18325475 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0046 User_sample_ID 46 Biomass_in_g 0.0274 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 3 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 0.89274 Enteral_Energy 12.99 Enteral_Fat 0.73988 Enteral_Protein 0.33295 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 4 Parenteral_Energy 55.09 Parenteral_Protein 3 Ratio_enteral 13 Ratio_parenteral 87 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479225 SAMN18325654 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0225 User_sample_ID 225 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 83 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 60 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479226 SAMN18325655 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0226 User_sample_ID 226 Biomass_in_g 0.0255 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 11 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 2.24 Enteral_Energy 32.57 Enteral_Fat 1.86 Enteral_Protein 0.83478 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 85 Parental_Fat 2.5 Parenteral_Carbohydrate 2.05 Parenteral_Energy 50.9 Parenteral_Protein 3.5 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479227 SAMN18325656 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0227 User_sample_ID 227 Biomass_in_g 0.0239 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 1.23 Enteral_Energy 17.83 Enteral_Fat 1.02 Enteral_Protein 0.45714 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 3.5 Parenteral_Carbohydrate 7.38 Parenteral_Energy 91.62 Parenteral_Protein 3.5 Ratio_enteral 13 Ratio_parenteral 87 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479228 SAMN18325657 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0228 User_sample_ID 228 Biomass_in_g 0.0214 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 19 Discharge_or_Death Discharge DNA_extraction_batch batch 18 Enteral_Carbohydrate 7.12 Enteral_Energy 109.16 Enteral_Fat 5.88 Enteral_Protein 4.02 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0.5 Parenteral_Carbohydrate 4.22 Parenteral_Energy 33.32 Parenteral_Protein 1 Ratio_enteral 73 Ratio_parenteral 27 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479229 SAMN18325658 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0229 User_sample_ID 229 Biomass_in_g 0.0206 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 51 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 6.53 Enteral_Energy 94.98 Enteral_Fat 5.41 Enteral_Protein 2.43 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 0 Parenteral_Carbohydrate 2.6 Parenteral_Energy 21 Parenteral_Protein 1.5 Ratio_enteral 85 Ratio_parenteral 15 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479230 SAMN18325659 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0230 User_sample_ID 230 DNA_extraction_batch batch xy BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479231 SAMN18325802 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0373 User_sample_ID 373 Biomass_in_g 0.0246 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 3.47 Enteral_Energy 50.5 Enteral_Fat 2.88 Enteral_Protein 1.29 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2.5 Parenteral_Carbohydrate 6.26 Parenteral_Energy 75.16 Parenteral_Protein 3.5 Ratio_enteral 38 Ratio_parenteral 62 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479232 SAMN18325803 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB26 JMF_sample_ID JMF-1906-2-0374 User_sample_ID 374 Biomass_in_g 0.0253 Birth_head_circumference_in_cm 22 Birth_length_in_cm 31.5 Birth_weight_in_g 615 Connatal_infection no Days_in_hospital 88 Days_of_life 40 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 26+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2390 Discharge_length 44 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.31 m_leukocytes 21 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479233 SAMN18325804 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0375 User_sample_ID 375 Biomass_in_g 0.0217 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479234 SAMN18325805 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0376 User_sample_ID 376 Biomass_in_g 0.0221 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 0 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 0.24132 Enteral_Energy 3.51 Enteral_Fat 0.2 Enteral_Protein 0.09 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1 Parenteral_Carbohydrate 4.82 Parenteral_Energy 45.79 Parenteral_Protein 2 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479235 SAMN18325806 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0377 User_sample_ID 377 Biomass_in_g 0.0249 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 218 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479236 SAMN18325807 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0378 User_sample_ID 378 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 5.11 Enteral_Energy 74.28 Enteral_Fat 4.23 Enteral_Protein 1.9 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 0.5 Parenteral_Carbohydrate 3.39 Parenteral_Energy 32.59 Parenteral_Protein 2 Ratio_enteral 64 Ratio_parenteral 36 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479237 SAMN18325808 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0379 User_sample_ID 379 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 10 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 3.96 Enteral_Energy 57.62 Enteral_Fat 3.28 Enteral_Protein 1.48 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 0 Parenteral_Carbohydrate 6.8 Parenteral_Energy 49.18 Parenteral_Protein 2.5 Ratio_enteral 46 Ratio_parenteral 54 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479238 SAMN18325884 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0455 User_sample_ID 455 DNA_extraction_batch batch 20 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479239 SAMN18325883 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0454 User_sample_ID 454 Biomass_in_g 0.0252 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 60 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479240 SAMN18325882 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB59 JMF_sample_ID JMF-1906-2-0453 User_sample_ID 453 Biomass_in_g 0.0238 Birth_head_circumference_in_cm 25 Birth_length_in_cm 35 Birth_weight_in_g 960 Connatal_infection no Days_in_hospital 35 Days_of_life 33 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Type_of_twin dc/da gemini Intrauterine_growth_retardation 0 m_number_of_pregnancies 9 m_number_of_given_births 9 DM Sectio pPROM 0 m_CRP 1.25 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479241 SAMN18325885 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0456 User_sample_ID 456 Biomass_in_g 0.0204 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 75 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479242 SAMN18325886 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB60 JMF_sample_ID JMF-1906-2-0457 User_sample_ID 457 Biomass_in_g 0.0235 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32.5 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 100 Days_of_life 65 Discharge_or_Death Discharge DNA_extraction_batch batch 21 GA 25+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Discharge_weight 3020 Discharge_length 48 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Spontan pPROM 1 m_CRP 0.05 m_leukocytes 7 m_antibiotics Standacillin/Clindamycin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479243 SAMN18325887 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0458 User_sample_ID 458 Biomass_in_g 0.0221 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 71 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479244 SAMN18325586 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0157 User_sample_ID 157 Biomass_in_g 0.0212 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 1.59 Enteral_Energy 23.09 Enteral_Fat 1.32 Enteral_Protein 0.59178 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 3 Parenteral_Carbohydrate 7.52 Parenteral_Energy 87.4 Parenteral_Protein 3.5 Ratio_enteral 18 Ratio_parenteral 82 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479245 SAMN18325888 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0459 User_sample_ID 459 Biomass_in_g 0.0246 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 60 Discharge_or_Death Discharge DNA_extraction_batch batch 20 Enteral_Carbohydrate 7.19 Enteral_Energy 110.98 Enteral_Fat 5.99 Enteral_Protein 4.1 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 4.18 Parenteral_Energy 43.93 Parenteral_Protein 1.2 Ratio_enteral 75 Ratio_parenteral 25 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479246 SAMN18325588 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0159 User_sample_ID 159 Biomass_in_g 0.0293 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 17 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 6.36 Enteral_Energy 92.53 Enteral_Fat 5.27 Enteral_Protein 2.37 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 0 Parenteral_Carbohydrate 2.78 Parenteral_Energy 22 Parenteral_Protein 1.5 Ratio_enteral 78 Ratio_parenteral 22 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479247 SAMN18325587 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0158 User_sample_ID 158 Biomass_in_g 0.0275 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 97 Discharge_or_Death Discharge DNA_extraction_batch batch 12 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity mature O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479248 SAMN18325589 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB12 JMF_sample_ID JMF-1906-2-0160 User_sample_ID 160 Biomass_in_g 0.0252 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 83 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 2.21 Enteral_Energy 32.15 Enteral_Fat 1.83 Enteral_Protein 0.82403 GA 26+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1 Parenteral_Carbohydrate 7.34 Parenteral_Energy 66.31 Parenteral_Protein 3.5 Ratio_enteral 25 Ratio_parenteral 75 Tokolysis no Tokolysis_days 0 Discharge_weight 2425 Discharge_length 44 Discharge_head_circumference 31.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479249 SAMN18325590 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0161 User_sample_ID 161 Biomass_in_g 0.0264 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 91 Discharge_or_Death Discharge DNA_extraction_batch batch 12 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479250 SAMN18325446 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0017 User_sample_ID 17 Biomass_in_g 0.024 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 02 Enteral_Carbohydrate 1.5 Enteral_Energy 20.1 Enteral_Fat 1.02 Enteral_Protein 0.54048 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 7.73 Parenteral_Energy 80.58 Parenteral_Protein 4 Ratio_enteral 19 Ratio_parenteral 81 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479251 SAMN18325591 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0162 User_sample_ID 162 Biomass_in_g 0.0246 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 26 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 9.41 Enteral_Energy 144.38 Enteral_Fat 7.77 Enteral_Protein 5.32 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 0 Parenteral_Carbohydrate 0.85458 Parenteral_Energy 5 Parenteral_Protein 0 Ratio_enteral 79 Ratio_parenteral 21 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479252 SAMN18325476 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0047 User_sample_ID 47 Biomass_in_g 0.0285 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 27 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2 Parenteral_Carbohydrate 6.31 Parenteral_Energy 70.51 Parenteral_Protein 3.53 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479253 SAMN18325889 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0460 User_sample_ID 460 Biomass_in_g 0.0287 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 92 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 60 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479254 SAMN18325890 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0461 User_sample_ID 461 Biomass_in_g 0.00281 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 77 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479255 SAMN18325891 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0462 User_sample_ID 462 Biomass_in_g 0.0257 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 43 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479256 SAMN18325892 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB60 JMF_sample_ID JMF-1906-2-0463 User_sample_ID 463 Biomass_in_g 0.0255 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32.5 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 100 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 20 Enteral_Carbohydrate 4.15 Enteral_Energy 60.14 Enteral_Fat 3.44 Enteral_Protein 1.55 GA 25+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.5 Parenteral_Carbohydrate 5.32 Parenteral_Energy 59.68 Parenteral_Protein 3.5 Ratio_enteral 48 Ratio_parenteral 52 Tokolysis yes Discharge_weight 3020 Discharge_length 48 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Spontan pPROM 1 m_CRP 0.05 m_leukocytes 7 m_antibiotics Standacillin/Clindamycin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479257 SAMN18325893 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0464 User_sample_ID 464 Biomass_in_g 0.0292 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 69 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479258 SAMN18325894 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0465 User_sample_ID 465 Biomass_in_g 0.0285 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 60 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479259 SAMN18325896 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0467 User_sample_ID 467 Biomass_in_g 0.026 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 71 Discharge_or_Death Discharge DNA_extraction_batch batch 20 Enteral_Carbohydrate 5.66 Enteral_Energy 87.39 Enteral_Fat 4.72 Enteral_Protein 3.23 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 4.14 Parenteral_Energy 43.68 Parenteral_Protein 1.2 Ratio_enteral 59 Ratio_parenteral 41 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479260 SAMN18325895 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB60 JMF_sample_ID JMF-1906-2-0466 User_sample_ID 466 Biomass_in_g 0.0204 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32.5 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 100 Days_of_life 30 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 25+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Tokolysis yes Discharge_weight 3020 Discharge_length 48 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Spontan pPROM 1 m_CRP 0.05 m_leukocytes 7 m_antibiotics Standacillin/Clindamycin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479261 SAMN18325897 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB59 JMF_sample_ID JMF-1906-2-0468 User_sample_ID 468 Biomass_in_g 0.0213 Birth_head_circumference_in_cm 25 Birth_length_in_cm 35 Birth_weight_in_g 960 Connatal_infection no Days_in_hospital 35 Days_of_life 0 Discharge_or_Death Discharge DNA_extraction_batch batch 20 Enteral_Carbohydrate 0.40178 Enteral_Energy 5.83 Enteral_Fat 0.33299 Enteral_Protein 0.15068 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.2 Parenteral_Carbohydrate 5 Parenteral_Energy 49.62 Parenteral_Protein 2.2 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis yes Type_of_twin dc/da gemini Intrauterine_growth_retardation 0 m_number_of_pregnancies 9 m_number_of_given_births 9 DM Sectio pPROM 0 m_CRP 1.25 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479262 SAMN18325898 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB60 JMF_sample_ID JMF-1906-2-0469 User_sample_ID 469 Biomass_in_g 0.0247 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32.5 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 100 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 25+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge O2_max_at_birth 50 Tokolysis yes Discharge_weight 3020 Discharge_length 48 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 3 m_number_of_given_births 3 DM Spontan pPROM 1 m_CRP 0.05 m_leukocytes 7 m_antibiotics Standacillin/Clindamycin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479263 SAMN18325881 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB59 JMF_sample_ID JMF-1906-2-0452 User_sample_ID 452 Biomass_in_g 0.0212 Birth_head_circumference_in_cm 25 Birth_length_in_cm 35 Birth_weight_in_g 960 Connatal_infection no Days_in_hospital 35 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 02 Enteral_Carbohydrate 3.86 Enteral_Energy 56 Enteral_Fat 3.2 Enteral_Protein 1.45 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 2 Parenteral_Carbohydrate 4.71 Parenteral_Energy 59.2 Parenteral_Protein 3 Ratio_enteral 50 Ratio_parenteral 50 Tokolysis yes Type_of_twin dc/da gemini Intrauterine_growth_retardation 0 m_number_of_pregnancies 9 m_number_of_given_births 9 DM Sectio pPROM 0 m_CRP 1.25 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479264 SAMN18325899 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0470 User_sample_ID 470 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 127 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479265 SAMN18325485 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0056 User_sample_ID 56 Biomass_in_g 0.0273 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 3.17 Enteral_Energy 46.17 Enteral_Fat 2.63 Enteral_Protein 1.18 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1.5 Parenteral_Carbohydrate 7.21 Parenteral_Energy 68.58 Parenteral_Protein 3 Ratio_enteral 39 Ratio_parenteral 61 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479266 SAMN18325486 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0057 User_sample_ID 57 Biomass_in_g 0.0224 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 74 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479267 SAMN18325487 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0058 User_sample_ID 58 Biomass_in_g 0.0236 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 30 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479268 SAMN18325488 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0059 User_sample_ID 59 Biomass_in_g 0.0269 DNA_extraction_batch batch 01 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479269 SAMN18325489 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0060 User_sample_ID 60 Biomass_in_g 0.027 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 16 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 3.18 Enteral_Energy 46.2 Enteral_Fat 2.64 Enteral_Protein 1.19 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 4.21 Parenteral_Energy 56.4 Parenteral_Protein 3 Ratio_enteral 36 Ratio_parenteral 64 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479270 SAMN18325618 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0189 User_sample_ID 189 Biomass_in_g 0.0266 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 35 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479271 SAMN18325617 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB26 JMF_sample_ID JMF-1906-2-0188 User_sample_ID 188 Biomass_in_g 0.0202 Birth_head_circumference_in_cm 22 Birth_length_in_cm 31.5 Birth_weight_in_g 615 Connatal_infection no Days_in_hospital 88 Days_of_life 81 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 26+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2390 Discharge_length 44 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.31 m_leukocytes 21 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479272 SAMN18325619 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB36 JMF_sample_ID JMF-1906-2-0190 User_sample_ID 190 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33 Birth_weight_in_g 780 Connatal_infection no Days_in_hospital 68 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 5.06 Enteral_Energy 73.67 Enteral_Fat 4.2 Enteral_Protein 1.89 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 35 Parental_Fat 0.5 Parenteral_Carbohydrate 5.26 Parenteral_Energy 43.3 Parenteral_Protein 2 Ratio_enteral 66 Ratio_parenteral 34 Tokolysis no Tokolysis_days 0 Discharge_weight 2084 Discharge_length 41 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.2 m_leukocytes 13.25 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479273 SAMN18325449 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0020 User_sample_ID 20 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 12 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 4.85 Enteral_Energy 70.51 Enteral_Fat 4.02 Enteral_Protein 1.81 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1.5 Parenteral_Carbohydrate 6.83 Parenteral_Energy 66.4 Parenteral_Protein 3 Ratio_enteral 53 Ratio_parenteral 47 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479274 SAMN18325620 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0191 User_sample_ID 191 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 1.59 Enteral_Energy 23.09 Enteral_Fat 1.32 Enteral_Protein 0.59178 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 3 Parenteral_Carbohydrate 7.52 Parenteral_Energy 87.4 Parenteral_Protein 3.5 Ratio_enteral 18 Ratio_parenteral 82 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479275 SAMN18325621 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0192 User_sample_ID 192 Biomass_in_g 0.0239 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 17 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 4.74 Enteral_Energy 68.99 Enteral_Fat 3.93 Enteral_Protein 1.77 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1 Parenteral_Carbohydrate 3.55 Parenteral_Energy 39.3 Parenteral_Protein 2.2 Ratio_enteral 54 Ratio_parenteral 46 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479276 SAMN18325622 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0193 User_sample_ID 193 Biomass_in_g 0.0247 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 255 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479277 SAMN18325433 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0004 User_sample_ID 4 DNA_extraction_batch batch 01 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479278 SAMN18325729 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0300 User_sample_ID 300 Biomass_in_g 0.022 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 0.30212 Enteral_Energy 4.38 Enteral_Fat 0.25039 Enteral_Protein 0.1133 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 4.88 Parenteral_Energy 60.3 Parenteral_Protein 3 Ratio_enteral 3 Ratio_parenteral 97 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479279 SAMN18325460 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0031 User_sample_ID 31 Biomass_in_g 0.0221 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 0 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 0.197 Enteral_Energy 2.87 Enteral_Fat 0.16327 Enteral_Protein 0.07347 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 45 Parental_Fat 1 Parenteral_Carbohydrate 4.5 Parenteral_Energy 43.94 Parenteral_Protein 2 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479280 SAMN18325730 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0301 User_sample_ID 301 Biomass_in_g 0.0282 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 46 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 3.59 Enteral_Energy 52.26 Enteral_Fat 2.98 Enteral_Protein 1.34 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1.2 Parenteral_Carbohydrate 6.66 Parenteral_Energy 61.61 Parenteral_Protein 2.8 Ratio_enteral 47 Ratio_parenteral 53 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479281 SAMN18325731 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0302 User_sample_ID 302 Biomass_in_g 0.0276 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 4.68 Enteral_Energy 68.09 Enteral_Fat 3.88 Enteral_Protein 1.75 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 0.8 Parenteral_Carbohydrate 4.36 Parenteral_Energy 43.17 Parenteral_Protein 2.5 Ratio_enteral 51 Ratio_parenteral 49 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479282 SAMN18325732 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0303 User_sample_ID 303 Biomass_in_g 0.0239 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 2.17 Enteral_Energy 31.5 Enteral_Fat 1.79 Enteral_Protein 0.80748 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 5.97 Parenteral_Energy 58.46 Parenteral_Protein 3 Ratio_enteral 25 Ratio_parenteral 75 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479283 SAMN18325436 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB58 JMF_sample_ID JMF-1906-2-0007 User_sample_ID 7 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 29 Birth_weight_in_g 550 Connatal_infection unknown Days_in_hospital 8 Days_of_life 6 Discharge_or_Death Death DNA_extraction_batch batch 02 Enteral_Carbohydrate 1.48 Enteral_Energy 21.44 Enteral_Fat 1.23 Enteral_Protein 0.55436 GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 4.25 Parenteral_Energy 53.57 Parenteral_Protein 3.5 Ratio_enteral 16 Ratio_parenteral 84 Tokolysis no BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479284 SAMN18325733 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0304 User_sample_ID 304 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 1.3 Enteral_Energy 18.88 Enteral_Fat 1.08 Enteral_Protein 0.48403 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.5 Parenteral_Carbohydrate 5.4 Parenteral_Energy 58.19 Parenteral_Protein 3 Ratio_enteral 13 Ratio_parenteral 87 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479285 SAMN18325490 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0061 User_sample_ID 61 Biomass_in_g 0.0269 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 80 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 6.94 Enteral_Energy 92.52 Enteral_Fat 4.65 Enteral_Protein 2.74 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Parental_Fat 1.5 Parenteral_Carbohydrate 1.08 Parenteral_Energy 26.26 Parenteral_Protein 1.25 Ratio_enteral 75 Ratio_parenteral 25 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479286 SAMN18325491 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0062 User_sample_ID 62 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 43 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479287 SAMN18325492 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0063 User_sample_ID 63 DNA_extraction_batch batch 02 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479288 SAMN18325493 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0064 User_sample_ID 64 Biomass_in_g 0.0268 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 128 Discharge_or_Death Discharge GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity mature O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479289 SAMN18325494 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0065 User_sample_ID 65 Biomass_in_g 0.0228 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 4.33 Enteral_Energy 63 Enteral_Fat 3.59 Enteral_Protein 1.61 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1 Parenteral_Carbohydrate 2.72 Parenteral_Energy 37.69 Parenteral_Protein 3 Ratio_enteral 48 Ratio_parenteral 52 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479290 SAMN18325495 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0066 User_sample_ID 66 Biomass_in_g 0.0203 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 21 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 8.49 Enteral_Energy 130.29 Enteral_Fat 7.02 Enteral_Protein 4.8 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 0 Parenteral_Carbohydrate 2.26 Parenteral_Energy 17.01 Parenteral_Protein 1 Ratio_enteral 87 Ratio_parenteral 13 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479291 SAMN18325623 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0194 User_sample_ID 194 Biomass_in_g 0.0237 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 4.77 Enteral_Energy 69.47 Enteral_Fat 3.96 Enteral_Protein 1.78 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 2 Parenteral_Carbohydrate 4.25 Parenteral_Energy 56.56 Parenteral_Protein 3 Ratio_enteral 49 Ratio_parenteral 51 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479292 SAMN18325624 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0195 User_sample_ID 195 Biomass_in_g 0.0287 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479293 SAMN18325625 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0196 User_sample_ID 196 Biomass_in_g 0.0285 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479294 SAMN18325627 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0198 User_sample_ID 198 Biomass_in_g 0.0206 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 62 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479295 SAMN18325626 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB31 JMF_sample_ID JMF-1906-2-0197 User_sample_ID 197 Biomass_in_g 0.025 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33.5 Birth_weight_in_g 975 Connatal_infection no Days_in_hospital 57 Days_of_life 50 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 27+5 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Discharge_weight 2046 Discharge_length 42.5 Discharge_head_circumference 25 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.98 m_leukocytes 17.33 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479296 SAMN18325628 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0199 User_sample_ID 199 DNA_extraction_batch batch 13 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479297 SAMN18325629 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0200 User_sample_ID 200 Biomass_in_g 0.0265 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 5.78 Enteral_Energy 84.16 Enteral_Fat 4.79 Enteral_Protein 2.16 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 0 Parenteral_Carbohydrate 3.29 Parenteral_Energy 26.98 Parenteral_Protein 2 Ratio_enteral 70 Ratio_parenteral 30 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479298 SAMN18325534 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0105 User_sample_ID 105 DNA_extraction_batch batch 06 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479299 SAMN18325535 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0106 User_sample_ID 106 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 88 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479300 SAMN18325815 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB25 JMF_sample_ID JMF-1906-2-0386 User_sample_ID 386 Biomass_in_g 0.0279 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 860 Connatal_infection yes Days_in_hospital 70 Days_of_life 45 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 26+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Discharge_weight 2082 Discharge_length 41 Discharge_head_circumference 28 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1.56 m_leukocytes 15 m_antibiotics Standacillin LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479301 SAMN18325816 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0387 User_sample_ID 387 Biomass_in_g 0.0257 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479302 SAMN18325536 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0107 User_sample_ID 107 Biomass_in_g 0.0264 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 27 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 5.2 Enteral_Energy 75.43 Enteral_Fat 4.31 Enteral_Protein 1.95 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Parental_Fat 1 Parenteral_Carbohydrate 4.19 Parenteral_Energy 40.19 Parenteral_Protein 1.5 Ratio_enteral 67 Ratio_parenteral 33 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479303 SAMN18325818 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB25 JMF_sample_ID JMF-1906-2-0389 User_sample_ID 389 Biomass_in_g 0.0263 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 860 Connatal_infection yes Days_in_hospital 70 Days_of_life 30 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 26+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Discharge_weight 2082 Discharge_length 41 Discharge_head_circumference 28 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1.56 m_leukocytes 15 m_antibiotics Standacillin LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479304 SAMN18325817 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0388 User_sample_ID 388 Biomass_in_g 0.0233 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 48 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479305 SAMN18325819 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0390 User_sample_ID 390 Biomass_in_g 0.0282 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 69 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479306 SAMN18325469 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0040 User_sample_ID 40 DNA_extraction_batch batch 03 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479307 SAMN18325820 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0391 User_sample_ID 391 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479308 SAMN18325496 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB41 JMF_sample_ID JMF-1906-2-0067 User_sample_ID 67 Biomass_in_g 0.0275 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 36 Birth_weight_in_g 870 Connatal_infection unknown Days_in_hospital 71 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 55 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2242 Discharge_length 46 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479309 SAMN18325497 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0068 User_sample_ID 68 Biomass_in_g 0.0253 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 2.48 Enteral_Energy 33.26 Enteral_Fat 1.71 Enteral_Protein 0.5869 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 3 Parenteral_Carbohydrate 9.2 Parenteral_Energy 96.26 Parenteral_Protein 3.3 Ratio_enteral 33 Ratio_parenteral 67 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479310 SAMN18325498 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0069 User_sample_ID 69 Biomass_in_g 0.0279 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479311 SAMN18325499 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0070 User_sample_ID 70 Biomass_in_g 0.0242 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 12 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 3.07 Enteral_Energy 44.51 Enteral_Fat 2.54 Enteral_Protein 1.15 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 4.63 Parenteral_Energy 58.78 Parenteral_Protein 3 Ratio_enteral 36 Ratio_parenteral 64 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479312 SAMN18325437 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0008 User_sample_ID 8 Biomass_in_g 0.024 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 02 Enteral_Carbohydrate 1.5 Enteral_Energy 20.1 Enteral_Fat 1.02 Enteral_Protein 0.54048 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 7.73 Parenteral_Energy 80.58 Parenteral_Protein 4 Ratio_enteral 19 Ratio_parenteral 81 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479313 SAMN18325500 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0071 User_sample_ID 71 Biomass_in_g 0.0218 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 02 Enteral_Carbohydrate 0.37487 Enteral_Energy 5.44 Enteral_Fat 0.31068 Enteral_Protein 0.14058 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1.63 Parenteral_Carbohydrate 5.59 Parenteral_Energy 56.78 Parenteral_Protein 2.04 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479314 SAMN18325432 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0003 User_sample_ID 3 Biomass_in_g 0.0267 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479315 SAMN18325501 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB59 JMF_sample_ID JMF-1906-2-0072 User_sample_ID 72 Biomass_in_g 0.0251 Birth_head_circumference_in_cm 25 Birth_length_in_cm 35 Birth_weight_in_g 960 Connatal_infection no Days_in_hospital 35 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Type_of_twin dc/da gemini Intrauterine_growth_retardation 0 m_number_of_pregnancies 9 m_number_of_given_births 9 DM Sectio pPROM 0 m_CRP 1.25 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479316 SAMN18325450 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0021 User_sample_ID 21 Biomass_in_g 0.0208 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 28 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 6.59 Enteral_Energy 101.14 Enteral_Fat 5.45 Enteral_Protein 3.73 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 0 Parenteral_Carbohydrate 4.72 Parenteral_Energy 29.2 Parenteral_Protein 0.5 Ratio_enteral 68 Ratio_parenteral 32 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479317 SAMN18325631 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0202 User_sample_ID 202 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 1.35 Enteral_Energy 19.57 Enteral_Fat 1.11 Enteral_Protein 0.50174 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 30 Parental_Fat 1.5 Parenteral_Carbohydrate 7.42 Parenteral_Energy 73.79 Parenteral_Protein 4 Ratio_enteral 15 Ratio_parenteral 85 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479318 SAMN18325630 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB26 JMF_sample_ID JMF-1906-2-0201 User_sample_ID 201 Biomass_in_g 0.0286 Birth_head_circumference_in_cm 22 Birth_length_in_cm 31.5 Birth_weight_in_g 615 Connatal_infection no Days_in_hospital 88 Days_of_life 69 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 26+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2390 Discharge_length 44 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.31 m_leukocytes 21 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479319 SAMN18325632 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0203 User_sample_ID 203 Biomass_in_g 0.0274 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 3.64 Enteral_Energy 52.92 Enteral_Fat 3.01 Enteral_Protein 1.36 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 30 Parental_Fat 1.8 Parenteral_Carbohydrate 4.19 Parenteral_Energy 56.22 Parenteral_Protein 3.5 Ratio_enteral 36 Ratio_parenteral 64 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479320 SAMN18325633 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0204 User_sample_ID 204 Biomass_in_g 0.0224 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 35 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 30 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479321 SAMN18325634 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB15 JMF_sample_ID JMF-1906-2-0205 User_sample_ID 205 Biomass_in_g 0.0225 Birth_head_circumference_in_cm 22 Birth_length_in_cm 36 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 75 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 2670 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 4.85 m_leukocytes 17.6 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479322 SAMN18325735 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB15 JMF_sample_ID JMF-1906-2-0306 User_sample_ID 306 Biomass_in_g 0.0217 Birth_head_circumference_in_cm 22 Birth_length_in_cm 36 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 75 Days_of_life 28 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 4.71 Enteral_Energy 70.5 Enteral_Fat 3.89 Enteral_Protein 2.25 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 1 Parenteral_Carbohydrate 5.18 Parenteral_Energy 47.88 Parenteral_Protein 2 Ratio_enteral 47 Ratio_parenteral 53 Tokolysis no Tokolysis_days 0 Discharge_weight 2670 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 4.85 m_leukocytes 17.6 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479323 SAMN18325734 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0305 User_sample_ID 305 Biomass_in_g 0.0294 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 1.17 Enteral_Energy 17.02 Enteral_Fat 0.9697 Enteral_Protein 0.43636 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 2.5 Parenteral_Carbohydrate 5.86 Parenteral_Energy 72.86 Parenteral_Protein 3.5 Ratio_enteral 12 Ratio_parenteral 88 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479324 SAMN18325736 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB12 JMF_sample_ID JMF-1906-2-0307 User_sample_ID 307 Biomass_in_g 0.0238 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 83 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 14 GA 26+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 2425 Discharge_length 44 Discharge_head_circumference 31.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479325 SAMN18325737 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB17 JMF_sample_ID JMF-1906-2-0308 User_sample_ID 308 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 34 Birth_weight_in_g 703 Connatal_infection yes Days_in_hospital 68 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 0.28814 Enteral_Energy 4.19 Enteral_Fat 0.23881 Enteral_Protein 0.10746 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 3.5 Parenteral_Energy 52.21 Parenteral_Protein 3 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 3164 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479326 SAMN18325738 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0309 User_sample_ID 309 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 26 Discharge_or_Death Discharge DNA_extraction_batch batch 14 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479327 SAMN18325461 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0032 User_sample_ID 32 Biomass_in_g 0.0256 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479328 SAMN18325739 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0310 User_sample_ID 310 Biomass_in_g 0.0218 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 1.33 Enteral_Energy 19.37 Enteral_Fat 1.1 Enteral_Protein 0.49655 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.5 Parenteral_Carbohydrate 5 Parenteral_Energy 55.83 Parenteral_Protein 3 Ratio_enteral 15 Ratio_parenteral 85 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479329 SAMN18325821 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0392 User_sample_ID 392 Biomass_in_g 0.0225 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 85 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479330 SAMN18325537 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0108 User_sample_ID 108 Biomass_in_g 0.0269 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 44 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479331 SAMN18325822 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0393 User_sample_ID 393 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479332 SAMN18325823 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0394 User_sample_ID 394 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 95 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479333 SAMN18325824 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0395 User_sample_ID 395 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 0 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479334 SAMN18325825 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0396 User_sample_ID 396 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 95 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479335 SAMN18325826 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0397 User_sample_ID 397 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 3.63 Enteral_Energy 52.78 Enteral_Fat 3.01 Enteral_Protein 1.35 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1 Parenteral_Carbohydrate 5.82 Parenteral_Energy 53.55 Parenteral_Protein 2.5 Ratio_enteral 42 Ratio_parenteral 58 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479336 SAMN18325827 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0398 User_sample_ID 398 Biomass_in_g 0.0237 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 68 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479337 SAMN18325502 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0073 User_sample_ID 73 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479338 SAMN18325477 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0048 User_sample_ID 48 Biomass_in_g 0.024 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 4.97 Enteral_Energy 76.22 Enteral_Fat 4.1 Enteral_Protein 2.81 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0.5 Parenteral_Carbohydrate 3.25 Parenteral_Energy 29.77 Parenteral_Protein 1.5 Ratio_enteral 52 Ratio_parenteral 48 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479339 SAMN18325900 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0471 User_sample_ID 471 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 64 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479340 SAMN18325551 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB46 JMF_sample_ID JMF-1906-2-0122 User_sample_ID 122 Biomass_in_g 0.026 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 33 Birth_weight_in_g 865 Connatal_infection yes Days_in_hospital 100 Days_of_life 3 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 0.79338 Enteral_Energy 11.54 Enteral_Fat 0.65753 Enteral_Protein 0.29589 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2.5 Parenteral_Carbohydrate 7 Parenteral_Energy 79.37 Parenteral_Protein 3.5 Ratio_enteral 10 Ratio_parenteral 90 Tokolysis yes Tokolysis_days 1 Discharge_weight 3140 Discharge_length 50 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Standacillin/Zithromax LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479341 SAMN18325550 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0121 User_sample_ID 121 Biomass_in_g 0.0232 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 31 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479342 SAMN18325552 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0123 User_sample_ID 123 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 33 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479343 SAMN18325554 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0125 User_sample_ID 125 Biomass_in_g 0.0274 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479344 SAMN18325553 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0124 User_sample_ID 124 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 1.4 Enteral_Energy 20.43 Enteral_Fat 1.16 Enteral_Protein 0.52364 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0.8 Parenteral_Carbohydrate 4 Parenteral_Energy 45.05 Parenteral_Protein 3.5 Ratio_enteral 13 Ratio_parenteral 87 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479345 SAMN18325555 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0126 User_sample_ID 126 Biomass_in_g 0.0289 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 44 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479346 SAMN18325453 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0024 User_sample_ID 24 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 85 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479347 SAMN18325661 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0232 User_sample_ID 232 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 62 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479348 SAMN18325660 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0231 User_sample_ID 231 Biomass_in_g 0.0268 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 55 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 80 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479349 SAMN18325662 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0233 User_sample_ID 233 Biomass_in_g 0.0247 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479350 SAMN18325663 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0234 User_sample_ID 234 Biomass_in_g 0.0299 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 80 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479351 SAMN18325665 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0236 User_sample_ID 236 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 85 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479352 SAMN18325664 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0235 User_sample_ID 235 Biomass_in_g 0.0262 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 36 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2.5 Parenteral_Carbohydrate 10.11 Parenteral_Energy 97.35 Parenteral_Protein 3.5 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479353 SAMN18325902 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB01 JMF_sample_ID JMF-1906-2-0473 User_sample_ID 473 Biomass_in_g 0.028 Birth_head_circumference_in_cm 21 Birth_length_in_cm 28 Birth_weight_in_g 585 Connatal_infection yes Days_in_hospital 26 Days_of_life 0 Discharge_or_Death Death Enteral_Carbohydrate 0.33001 Enteral_Energy 4.8 Enteral_Fat 0.2735 Enteral_Protein 0.12308 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1 Parenteral_Carbohydrate 5 Parenteral_Energy 46.81 Parenteral_Protein 2 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis yes Tokolysis_days 9 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479354 SAMN18325903 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0474 User_sample_ID 474 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479355 SAMN18325901 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB59 JMF_sample_ID JMF-1906-2-0472 User_sample_ID 472 Biomass_in_g 0.0235 Birth_head_circumference_in_cm 25 Birth_length_in_cm 35 Birth_weight_in_g 960 Connatal_infection no Days_in_hospital 35 Days_of_life 33 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Type_of_twin dc/da gemini Intrauterine_growth_retardation 0 m_number_of_pregnancies 9 m_number_of_given_births 9 DM Sectio pPROM 0 m_CRP 1.25 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479356 SAMN18325904 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB01 JMF_sample_ID JMF-1906-2-0475 User_sample_ID 475 Biomass_in_g 0.025 Birth_head_circumference_in_cm 21 Birth_length_in_cm 28 Birth_weight_in_g 585 Connatal_infection yes Days_in_hospital 26 Days_of_life 15 Discharge_or_Death Death Enteral_Carbohydrate 1.54 Enteral_Energy 22.47 Enteral_Fat 1.28 Enteral_Protein 0.576 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 2.83 Parenteral_Energy 43.53 Parenteral_Protein 3 Ratio_enteral 14 Ratio_parenteral 86 Tokolysis yes Tokolysis_days 9 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479357 SAMN18325905 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0476 User_sample_ID 476 Biomass_in_g 0.029 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 2 Discharge_or_Death Discharge Enteral_Carbohydrate 0.56781 Enteral_Energy 8.26 Enteral_Fat 0.47059 Enteral_Protein 0.21176 GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 2 Parenteral_Carbohydrate 6 Parenteral_Energy 68.6 Parenteral_Protein 3.5 Ratio_enteral 8 Ratio_parenteral 92 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479358 SAMN18325906 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0477 User_sample_ID 477 Biomass_in_g 0.029 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 13 Discharge_or_Death Discharge Enteral_Carbohydrate 5.24 Enteral_Energy 78.49 Enteral_Fat 4.34 Enteral_Protein 2.51 GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1 Parenteral_Carbohydrate 3.26 Parenteral_Energy 34.85 Parenteral_Protein 1.5 Ratio_enteral 61 Ratio_parenteral 39 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479359 SAMN18325907 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0478 User_sample_ID 478 Biomass_in_g 0.027 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 27 Discharge_or_Death Discharge GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479360 SAMN18325908 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0479 User_sample_ID 479 Biomass_in_g 0.029 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 14 Discharge_or_Death Discharge Enteral_Carbohydrate 2.18 Enteral_Energy 31.74 Enteral_Fat 1.81 Enteral_Protein 0.81356 GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1 Parenteral_Carbohydrate 3.03 Parenteral_Energy 35.5 Parenteral_Protein 2 Ratio_enteral 28 Ratio_parenteral 72 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479361 SAMN18325909 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0480 User_sample_ID 480 Biomass_in_g 0.028 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 42 Discharge_or_Death Discharge GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479362 SAMN18325478 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0049 User_sample_ID 49 Biomass_in_g 0.0251 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 81 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479363 SAMN18325910 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0481 User_sample_ID 481 Biomass_in_g 0.027 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 59 Discharge_or_Death Discharge GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479364 SAMN18325911 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0482 User_sample_ID 482 Biomass_in_g 0.024 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 69 Discharge_or_Death Discharge GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479365 SAMN18325912 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB02 JMF_sample_ID JMF-1906-2-0483 User_sample_ID 483 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 32 Birth_weight_in_g 735 Connatal_infection yes Days_in_hospital 89 Days_of_life 74 Discharge_or_Death Discharge GA 26+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2645 Discharge_length 43 Discharge_head_circumference 33.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.8 m_leukocytes 12 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479366 SAMN18325913 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0484 User_sample_ID 484 Biomass_in_g 0.021 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 6 Discharge_or_Death Discharge Enteral_Carbohydrate 1.46 Enteral_Energy 21.2 Enteral_Fat 1.21 Enteral_Protein 0.5434 GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 75 Parental_Fat 1 Parenteral_Carbohydrate 4.45 Parenteral_Energy 49.71 Parenteral_Protein 3.5 Ratio_enteral 16 Ratio_parenteral 84 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479367 SAMN18325594 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale Test sample env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0165 User_sample_ID 165 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479368 SAMN18325592 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB12 JMF_sample_ID JMF-1906-2-0163 User_sample_ID 163 Biomass_in_g 0.022 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 83 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 5.13 Enteral_Energy 74.6 Enteral_Fat 4.25 Enteral_Protein 1.91 GA 26+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0.5 Parenteral_Carbohydrate 5.32 Parenteral_Energy 43.64 Parenteral_Protein 2 Ratio_enteral 61 Ratio_parenteral 39 Tokolysis no Tokolysis_days 0 Discharge_weight 2425 Discharge_length 44 Discharge_head_circumference 31.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479369 SAMN18325593 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0164 User_sample_ID 164 Biomass_in_g 0.023 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 1.9 Enteral_Energy 27.65 Enteral_Fat 1.57 Enteral_Protein 0.70866 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 5 Parenteral_Energy 62.85 Parenteral_Protein 3.5 Ratio_enteral 18 Ratio_parenteral 82 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479370 SAMN18325596 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0167 User_sample_ID 167 Biomass_in_g 0.0245 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 3.31 Enteral_Energy 48.15 Enteral_Fat 2.74 Enteral_Protein 1.23 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 4.05 Parenteral_Energy 50.45 Parenteral_Protein 3 Ratio_enteral 36 Ratio_parenteral 64 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479371 SAMN18325595 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB12 JMF_sample_ID JMF-1906-2-0166 User_sample_ID 166 Biomass_in_g 0.026 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 83 Days_of_life 27 Discharge_or_Death Discharge DNA_extraction_batch batch 12 GA 26+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 2425 Discharge_length 44 Discharge_head_circumference 31.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479372 SAMN18325597 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0168 User_sample_ID 168 Biomass_in_g 0.0151 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 3.14 Enteral_Energy 45.73 Enteral_Fat 2.6 Enteral_Protein 1.17 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 0.5 Parenteral_Carbohydrate 2.4 Parenteral_Energy 33 Parenteral_Protein 3.5 Ratio_enteral 27 Ratio_parenteral 73 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479373 SAMN18325598 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0169 User_sample_ID 169 Biomass_in_g 0.0217 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 0.39239 Enteral_Energy 5.71 Enteral_Fat 0.3252 Enteral_Protein 0.14634 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 5.5 Parenteral_Energy 56.71 Parenteral_Protein 2.5 Ratio_enteral 5 Ratio_parenteral 95 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479374 SAMN18325914 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0485 User_sample_ID 485 Biomass_in_g 0.027 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 13 Discharge_or_Death Discharge Enteral_Carbohydrate 2.03 Enteral_Energy 29.46 Enteral_Fat 1.68 Enteral_Protein 0.75524 GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 75 Parental_Fat 2.5 Parenteral_Carbohydrate 2.35 Parenteral_Energy 46.7 Parenteral_Protein 2 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479375 SAMN18325915 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0486 User_sample_ID 486 Biomass_in_g 0.028 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 27 Discharge_or_Death Discharge Enteral_Carbohydrate 3.43 Enteral_Energy 49.93 Enteral_Fat 2.84 Enteral_Protein 1.28 GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 75 Parental_Fat 1 Parenteral_Carbohydrate 4.56 Parenteral_Energy 44.45 Parenteral_Protein 2 Ratio_enteral 36 Ratio_parenteral 64 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479376 SAMN18325916 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0487 User_sample_ID 487 Biomass_in_g 0.025 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 44 Discharge_or_Death Discharge GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 75 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479377 SAMN18325917 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0488 User_sample_ID 488 Biomass_in_g 0.027 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 58 Discharge_or_Death Discharge GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 75 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479378 SAMN18325918 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0489 User_sample_ID 489 Biomass_in_g 0.024 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 75 Discharge_or_Death Discharge GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 75 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479379 SAMN18325919 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0490 User_sample_ID 490 Biomass_in_g 0.021 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 92 Discharge_or_Death Discharge GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 75 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479380 SAMN18325667 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0238 User_sample_ID 238 Biomass_in_g 0.0247 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479381 SAMN18325666 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0237 User_sample_ID 237 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 98 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479382 SAMN18325668 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0239 User_sample_ID 239 Biomass_in_g 0.0263 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 69 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 80 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479383 SAMN18325669 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0240 User_sample_ID 240 Biomass_in_g 0.0257 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 6.83 Enteral_Energy 104.73 Enteral_Fat 5.64 Enteral_Protein 3.86 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 30 Parental_Fat 0 Parenteral_Carbohydrate 3.14 Parenteral_Energy 22.12 Parenteral_Protein 1 Ratio_enteral 75 Ratio_parenteral 25 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479384 SAMN18325479 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0050 User_sample_ID 50 Biomass_in_g 0.0214 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 71 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479385 SAMN18325454 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0025 User_sample_ID 25 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479386 SAMN18325671 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0242 User_sample_ID 242 Biomass_in_g 0.0261 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479387 SAMN18325670 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0241 User_sample_ID 241 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 0.27191 Enteral_Energy 3.96 Enteral_Fat 0.22535 Enteral_Protein 0.10141 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 85 Parental_Fat 1.3 Parenteral_Carbohydrate 5.66 Parenteral_Energy 53.48 Parenteral_Protein 1.95 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479388 SAMN18325920 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB03 JMF_sample_ID JMF-1906-2-0491 User_sample_ID 491 Biomass_in_g 0.024 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29 Birth_weight_in_g 570 Connatal_infection no Days_in_hospital 122 Days_of_life 105 Discharge_or_Death Discharge GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 75 Tokolysis yes Tokolysis_days 5 Discharge_weight 2962 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.3 m_leukocytes 7 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. capitis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479389 SAMN18325921 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB10 JMF_sample_ID JMF-1906-2-0492 User_sample_ID 492 Biomass_in_g 0.033 Birth_head_circumference_in_cm 22 Birth_length_in_cm 30 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 45 Days_of_life 2 Discharge_or_Death Discharge Enteral_Carbohydrate 0.30889 Enteral_Energy 4.49 Enteral_Fat 0.256 Enteral_Protein 0.1152 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 6 Parenteral_Energy 57.59 Parenteral_Protein 2 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis no Tokolysis_days 0 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.26 m_leukocytes 7.99 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479390 SAMN18325922 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB10 JMF_sample_ID JMF-1906-2-0493 User_sample_ID 493 Biomass_in_g 0.027 Birth_head_circumference_in_cm 22 Birth_length_in_cm 30 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 45 Days_of_life 7 Discharge_or_Death Discharge Enteral_Carbohydrate 0.59402 Enteral_Energy 8.64 Enteral_Fat 0.49231 Enteral_Protein 0.22154 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2.5 Parenteral_Carbohydrate 3.87 Parenteral_Energy 57.38 Parenteral_Protein 2.5 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis no Tokolysis_days 0 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.26 m_leukocytes 7.99 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479391 SAMN18325923 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB10 JMF_sample_ID JMF-1906-2-0494 User_sample_ID 494 Biomass_in_g 0.031 Birth_head_circumference_in_cm 22 Birth_length_in_cm 30 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 45 Days_of_life 14 Discharge_or_Death Discharge Enteral_Carbohydrate 3.9 Enteral_Energy 56.74 Enteral_Fat 3.23 Enteral_Protein 1.45 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 5.34 Parenteral_Energy 57.85 Parenteral_Protein 3 Ratio_enteral 43 Ratio_parenteral 57 Tokolysis no Tokolysis_days 0 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.26 m_leukocytes 7.99 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479392 SAMN18325924 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB10 JMF_sample_ID JMF-1906-2-0495 User_sample_ID 495 Biomass_in_g 0.029 Birth_head_circumference_in_cm 22 Birth_length_in_cm 30 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 45 Days_of_life 27 Discharge_or_Death Discharge GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.26 m_leukocytes 7.99 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479393 SAMN18325925 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB10 JMF_sample_ID JMF-1906-2-0496 User_sample_ID 496 Biomass_in_g 0.027 Birth_head_circumference_in_cm 22 Birth_length_in_cm 30 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 45 Days_of_life 41 Discharge_or_Death Discharge GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 3 DM Sectio pPROM 1 m_CRP 0.26 m_leukocytes 7.99 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479394 SAMN18325672 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0243 User_sample_ID 243 Biomass_in_g 0.0205 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479395 SAMN18325673 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0244 User_sample_ID 244 Biomass_in_g 0.026 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 27 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479396 SAMN18325674 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0245 User_sample_ID 245 Biomass_in_g 0.023 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 2.5 Parenteral_Carbohydrate 5.28 Parenteral_Energy 69.53 Parenteral_Protein 3.5 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479397 SAMN18325675 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0246 User_sample_ID 246 Biomass_in_g 0.026 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 27 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479398 SAMN18325676 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0247 User_sample_ID 247 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 34 Discharge_or_Death Discharge DNA_extraction_batch batch 08 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479399 SAMN18325677 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB36 JMF_sample_ID JMF-1906-2-0248 User_sample_ID 248 Biomass_in_g 0.0199 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33 Birth_weight_in_g 780 Connatal_infection no Days_in_hospital 68 Days_of_life 27 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 35 Tokolysis no Tokolysis_days 0 Discharge_weight 2084 Discharge_length 41 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.2 m_leukocytes 13.25 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479400 SAMN18325678 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0249 User_sample_ID 249 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 3.9 Enteral_Energy 56.81 Enteral_Fat 3.24 Enteral_Protein 1.46 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early Parental_Fat 2.5 Parenteral_Carbohydrate 7.26 Parenteral_Energy 78.91 Parenteral_Protein 3 Ratio_enteral 48 Ratio_parenteral 52 Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479401 SAMN18325926 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0497 User_sample_ID 497 DNA_extraction_batch batch x_2017_1 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479402 SAMN18325927 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB05 JMF_sample_ID JMF-1906-2-0498 User_sample_ID 498 Biomass_in_g 0.023 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33.5 Birth_weight_in_g 875 Connatal_infection yes Days_in_hospital 91 Days_of_life 2 Discharge_or_Death Discharge Enteral_Carbohydrate 0.24132 Enteral_Energy 3.51 Enteral_Fat 0.2 Enteral_Protein 0.09 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 0.96154 Parenteral_Carbohydrate 5.21 Parenteral_Energy 47.32 Parenteral_Protein 1.92 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3652 Discharge_length 51 Discharge_head_circumference 37 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479403 SAMN18325928 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB05 JMF_sample_ID JMF-1906-2-0499 User_sample_ID 499 Biomass_in_g 0.023 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33.5 Birth_weight_in_g 875 Connatal_infection yes Days_in_hospital 91 Days_of_life 7 Discharge_or_Death Discharge Enteral_Carbohydrate 1.85 Enteral_Energy 26.91 Enteral_Fat 1.53 Enteral_Protein 0.68982 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 3 Parenteral_Carbohydrate 7.28 Parenteral_Energy 86.04 Parenteral_Protein 3.5 Ratio_enteral 20 Ratio_parenteral 80 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3652 Discharge_length 51 Discharge_head_circumference 37 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479404 SAMN18325929 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB05 JMF_sample_ID JMF-1906-2-0500 User_sample_ID 500 Biomass_in_g 0.031 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33.5 Birth_weight_in_g 875 Connatal_infection yes Days_in_hospital 91 Days_of_life 15 Discharge_or_Death Discharge Enteral_Carbohydrate 4.82 Enteral_Energy 72.17 Enteral_Fat 3.99 Enteral_Protein 2.3 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 5.22 Parenteral_Energy 60.14 Parenteral_Protein 2.5 Ratio_enteral 51 Ratio_parenteral 49 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3652 Discharge_length 51 Discharge_head_circumference 37 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479405 SAMN18325435 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0006 User_sample_ID 6 Biomass_in_g 0.0286 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 44 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 30 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479406 SAMN18325480 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0051 User_sample_ID 51 Biomass_in_g 0.0248 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 74 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479407 SAMN18325930 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB05 JMF_sample_ID JMF-1906-2-0501 User_sample_ID 501 Biomass_in_g 0.025 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33.5 Birth_weight_in_g 875 Connatal_infection yes Days_in_hospital 91 Days_of_life 28 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3652 Discharge_length 51 Discharge_head_circumference 37 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479408 SAMN18325556 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB41 JMF_sample_ID JMF-1906-2-0127 User_sample_ID 127 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 36 Birth_weight_in_g 870 Connatal_infection unknown Days_in_hospital 71 Days_of_life 32 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 6.82 Enteral_Energy 104.58 Enteral_Fat 5.63 Enteral_Protein 3.85 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 55 Parental_Fat 0 Parenteral_Carbohydrate 3.18 Parenteral_Energy 20.32 Parenteral_Protein 0.5 Ratio_enteral 75 Ratio_parenteral 25 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2242 Discharge_length 46 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479409 SAMN18325557 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0128 User_sample_ID 128 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 0 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 0.20538 Enteral_Energy 2.99 Enteral_Fat 0.17021 Enteral_Protein 0.0766 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 30 Parental_Fat 1 Parenteral_Carbohydrate 4.5 Parenteral_Energy 43.94 Parenteral_Protein 2 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479410 SAMN18325558 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB41 JMF_sample_ID JMF-1906-2-0129 User_sample_ID 129 Biomass_in_g 0.0112 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 36 Birth_weight_in_g 870 Connatal_infection unknown Days_in_hospital 71 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 1.42 Enteral_Energy 20.65 Enteral_Fat 1.18 Enteral_Protein 0.52941 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 55 Parental_Fat 2.5 Parenteral_Carbohydrate 6 Parenteral_Energy 73.62 Parenteral_Protein 3.5 Ratio_enteral 20 Ratio_parenteral 80 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2242 Discharge_length 46 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479411 SAMN18325443 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0014 User_sample_ID 14 Biomass_in_g 0.022 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 71 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479412 SAMN18325559 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0130 User_sample_ID 130 Biomass_in_g 0.0214 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 44 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479413 SAMN18325740 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0311 User_sample_ID 311 Biomass_in_g 0.0214 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 0.70846 Enteral_Energy 10.31 Enteral_Fat 0.58716 Enteral_Protein 0.26422 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2 Parenteral_Carbohydrate 6.5 Parenteral_Energy 69.48 Parenteral_Protein 3 Ratio_enteral 10 Ratio_parenteral 90 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479414 SAMN18325741 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0312 User_sample_ID 312 Biomass_in_g 0.028 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 0.31239 Enteral_Energy 4.55 Enteral_Fat 0.2589 Enteral_Protein 0.1165 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2 Parenteral_Carbohydrate 5.2 Parenteral_Energy 62.05 Parenteral_Protein 3 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479415 SAMN18325742 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB12 JMF_sample_ID JMF-1906-2-0313 User_sample_ID 313 Biomass_in_g 0.0235 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 83 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 14 GA 26+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 2425 Discharge_length 44 Discharge_head_circumference 31.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479416 SAMN18325743 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB17 JMF_sample_ID JMF-1906-2-0314 User_sample_ID 314 Biomass_in_g 0.0261 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 34 Birth_weight_in_g 703 Connatal_infection yes Days_in_hospital 68 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 4.23 Enteral_Energy 61.56 Enteral_Fat 3.51 Enteral_Protein 1.58 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1 Parenteral_Carbohydrate 4.83 Parenteral_Energy 50.64 Parenteral_Protein 3.2 Ratio_enteral 50 Ratio_parenteral 50 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 3164 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479417 SAMN18325744 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0315 User_sample_ID 315 Biomass_in_g 0.0234 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 70 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 0.69015 Enteral_Energy 10.58 Enteral_Fat 0.56996 Enteral_Protein 0.39004 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Parental_Fat 3 Parenteral_Carbohydrate 7.34 Parenteral_Energy 84.37 Parenteral_Protein 3 Ratio_enteral 7 Ratio_parenteral 93 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479418 SAMN18325503 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0074 User_sample_ID 74 Biomass_in_g 0.0268 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Days_of_life 60 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479419 SAMN18325745 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0316 User_sample_ID 316 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 14 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479420 SAMN18325505 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0076 User_sample_ID 76 Biomass_in_g 0.0201 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 03 Enteral_Carbohydrate 1.67 Enteral_Energy 24.35 Enteral_Fat 1.39 Enteral_Protein 0.62405 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 3 Parenteral_Carbohydrate 4 Parenteral_Energy 67.12 Parenteral_Protein 3.5 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479421 SAMN18325504 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB41 JMF_sample_ID JMF-1906-2-0075 User_sample_ID 75 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 36 Birth_weight_in_g 870 Connatal_infection unknown Days_in_hospital 71 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 55 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2242 Discharge_length 46 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479422 SAMN18325506 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0077 User_sample_ID 77 Biomass_in_g 0.0211 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Parental_Fat 2.41 Parenteral_Carbohydrate 7.03 Parenteral_Energy 76.52 Parenteral_Protein 2.97 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479423 SAMN18325507 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0078 User_sample_ID 78 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 30 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479424 SAMN18325509 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0080 User_sample_ID 80 Biomass_in_g 0.0217 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 52 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479425 SAMN18325508 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0079 User_sample_ID 79 Biomass_in_g 0.0285 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 98 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479426 SAMN18325510 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0081 User_sample_ID 81 Biomass_in_g 0.0253 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 96 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479427 SAMN18325438 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0009 User_sample_ID 9 Biomass_in_g 0.021 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 47 Discharge_or_Death Discharge DNA_extraction_batch batch 02 Enteral_Carbohydrate 3.14 Enteral_Energy 42.06 Enteral_Fat 2.14 Enteral_Protein 1.13 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 6.6 Parenteral_Energy 63.04 Parenteral_Protein 2.5 Ratio_enteral 45 Ratio_parenteral 55 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479428 SAMN18325511 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0082 User_sample_ID 82 DNA_extraction_batch batch 04 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479429 SAMN18325513 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0084 User_sample_ID 84 Biomass_in_g 0.0205 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 3.97 Enteral_Energy 57.83 Enteral_Fat 3.29 Enteral_Protein 1.48 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 85 Parental_Fat 1.5 Parenteral_Carbohydrate 3.85 Parenteral_Energy 49.25 Parenteral_Protein 3 Ratio_enteral 46 Ratio_parenteral 54 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479430 SAMN18325638 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0209 User_sample_ID 209 Biomass_in_g 0.022 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 100 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479431 SAMN18325512 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB40 JMF_sample_ID JMF-1906-2-0083 User_sample_ID 83 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 35 Birth_weight_in_g 680 Connatal_infection yes Days_in_hospital 89 Days_of_life 50 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Discharge_weight 3034 Discharge_length 49 Discharge_head_circumference 33.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 4.11 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479432 SAMN18325639 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0210 User_sample_ID 210 Biomass_in_g 0.0236 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479433 SAMN18325451 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0022 User_sample_ID 22 Biomass_in_g 0.0254 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 72 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 70 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479434 SAMN18325746 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0317 User_sample_ID 317 Biomass_in_g 0.0208 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 2.82 Enteral_Energy 41.03 Enteral_Fat 2.34 Enteral_Protein 1.05 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 2 Parenteral_Carbohydrate 7.26 Parenteral_Energy 77.9 Parenteral_Protein 4 Ratio_enteral 34 Ratio_parenteral 66 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479435 SAMN18325640 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0211 User_sample_ID 211 Biomass_in_g 0.0248 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 28 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 8.01 Enteral_Energy 122.9 Enteral_Fat 6.62 Enteral_Protein 4.53 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0 Parenteral_Carbohydrate 3.24 Parenteral_Energy 22.67 Parenteral_Protein 1 Ratio_enteral 83 Ratio_parenteral 17 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479436 SAMN18325747 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0318 User_sample_ID 318 Biomass_in_g 0.024 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 3 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 0.84396 Enteral_Energy 12.28 Enteral_Fat 0.69945 Enteral_Protein 0.31475 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 2 Parenteral_Carbohydrate 6 Parenteral_Energy 64.6 Parenteral_Protein 2.5 Ratio_enteral 11 Ratio_parenteral 89 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479437 SAMN18325749 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0320 User_sample_ID 320 Biomass_in_g 0.0225 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 6.57 Enteral_Energy 100.69 Enteral_Fat 5.42 Enteral_Protein 3.71 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 0.5 Parenteral_Carbohydrate 4.24 Parenteral_Energy 36.64 Parenteral_Protein 1.8 Ratio_enteral 66 Ratio_parenteral 34 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479438 SAMN18325748 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0319 User_sample_ID 319 Biomass_in_g 0.0271 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 4.13 Enteral_Energy 60.04 Enteral_Fat 3.42 Enteral_Protein 1.54 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 7.36 Parenteral_Energy 81.5 Parenteral_Protein 3.5 Ratio_enteral 43 Ratio_parenteral 57 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479439 SAMN18325462 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0033 User_sample_ID 33 Biomass_in_g 0.0241 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 58 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479440 SAMN18325750 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0321 User_sample_ID 321 Biomass_in_g 0.024 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 40 Discharge_or_Death Discharge DNA_extraction_batch batch 14 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479441 SAMN18325635 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB17 JMF_sample_ID JMF-1906-2-0206 User_sample_ID 206 Biomass_in_g 0.0242 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 34 Birth_weight_in_g 703 Connatal_infection yes Days_in_hospital 68 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 60 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 3164 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479442 SAMN18325637 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0208 User_sample_ID 208 Biomass_in_g 0.0262 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 34 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 80 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479443 SAMN18325636 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0207 User_sample_ID 207 Biomass_in_g 0.0214 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 28 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 6.13 Enteral_Energy 93.98 Enteral_Fat 5.06 Enteral_Protein 3.46 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1 Parenteral_Carbohydrate 5.24 Parenteral_Energy 48.23 Parenteral_Protein 2 Ratio_enteral 61 Ratio_parenteral 39 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479444 SAMN18325751 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0322 User_sample_ID 322 Biomass_in_g 0.0272 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 1.17 Enteral_Energy 17.02 Enteral_Fat 0.9697 Enteral_Protein 0.43636 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 2.5 Parenteral_Carbohydrate 5.86 Parenteral_Energy 72.86 Parenteral_Protein 3.5 Ratio_enteral 12 Ratio_parenteral 88 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479445 SAMN18325828 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0399 User_sample_ID 399 Biomass_in_g 0.0218 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 0.27191 Enteral_Energy 3.96 Enteral_Fat 0.22535 Enteral_Protein 0.10141 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.2 Parenteral_Carbohydrate 5 Parenteral_Energy 50.82 Parenteral_Protein 2.5 Ratio_enteral 5 Ratio_parenteral 95 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479446 SAMN18325829 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0400 User_sample_ID 400 Biomass_in_g 0.0221 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 55 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479447 SAMN18325434 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB59 JMF_sample_ID JMF-1906-2-0005 User_sample_ID 5 Biomass_in_g 0.0288 Birth_head_circumference_in_cm 25 Birth_length_in_cm 35 Birth_weight_in_g 960 Connatal_infection no Days_in_hospital 35 Days_of_life 0 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 0.40178 Enteral_Energy 5.83 Enteral_Fat 0.33299 Enteral_Protein 0.15068 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.2 Parenteral_Carbohydrate 5 Parenteral_Energy 49.62 Parenteral_Protein 2.2 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis yes Type_of_twin dc/da gemini Intrauterine_growth_retardation 0 m_number_of_pregnancies 9 m_number_of_given_births 9 DM Sectio pPROM 0 m_CRP 1.25 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479448 SAMN18325470 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB57 JMF_sample_ID JMF-1906-2-0041 User_sample_ID 41 Biomass_in_g 0.0242 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 565 Connatal_infection no Days_in_hospital 131 Days_of_life 8 Discharge_or_Death Discharge Enteral_Carbohydrate 1.42 Enteral_Energy 20.59 Enteral_Fat 1.18 Enteral_Protein 0.53235 GA 24+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2.5 Parenteral_Carbohydrate 4.21 Parenteral_Energy 63.36 Parenteral_Protein 3.5 Ratio_enteral 15 Ratio_parenteral 85 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 2685 Discharge_length 47 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479449 SAMN18325830 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0401 User_sample_ID 401 Biomass_in_g 0.0287 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479450 SAMN18325831 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0402 User_sample_ID 402 Biomass_in_g 0.023 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 85 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479451 SAMN18325515 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0086 User_sample_ID 86 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 1.27 Enteral_Energy 18.52 Enteral_Fat 1.05 Enteral_Protein 0.47473 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2.5 Parenteral_Carbohydrate 6 Parenteral_Energy 73.62 Parenteral_Protein 3.5 Ratio_enteral 14 Ratio_parenteral 86 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479452 SAMN18325514 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0085 User_sample_ID 85 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 2.69 Enteral_Energy 39.13 Enteral_Fat 2.23 Enteral_Protein 1 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 3 Parenteral_Carbohydrate 5.73 Parenteral_Energy 77.11 Parenteral_Protein 3.5 Ratio_enteral 33 Ratio_parenteral 67 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479453 SAMN18325516 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0087 User_sample_ID 87 Biomass_in_g 0.0217 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 2.02 Enteral_Energy 29.37 Enteral_Fat 1.67 Enteral_Protein 0.75294 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 3 Parenteral_Carbohydrate 5.31 Parenteral_Energy 74.69 Parenteral_Protein 3.5 Ratio_enteral 25 Ratio_parenteral 75 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479454 SAMN18325517 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0088 User_sample_ID 88 Biomass_in_g 0.0265 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 49 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479455 SAMN18325519 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB37 JMF_sample_ID JMF-1906-2-0090 User_sample_ID 90 Biomass_in_g 0.0211 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 775 Days_in_hospital 89 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 26+0 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Discharge_weight 3200 Discharge_length 51 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 4.3 m_leukocytes 17.3 m_antibiotics Unasyn LM incomplete Apg5 4 Apg10 4 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479456 SAMN18325518 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0089 User_sample_ID 89 Biomass_in_g 0.0273 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 2.65 Enteral_Energy 38.52 Enteral_Fat 2.19 Enteral_Protein 0.98743 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 6.03 Parenteral_Energy 59.82 Parenteral_Protein 2.5 Ratio_enteral 31 Ratio_parenteral 69 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479457 SAMN18325568 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0139 User_sample_ID 139 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 6.18 Enteral_Energy 94.86 Enteral_Fat 5.11 Enteral_Protein 3.5 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 0.8 Parenteral_Carbohydrate 4.22 Parenteral_Energy 36.36 Parenteral_Protein 1 Ratio_enteral 64 Ratio_parenteral 36 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479458 SAMN18325569 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0140 User_sample_ID 140 Biomass_in_g 0.0236 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 3.57 Enteral_Energy 51.93 Enteral_Fat 2.96 Enteral_Protein 1.33 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0.5 Parenteral_Carbohydrate 4.27 Parenteral_Energy 40.97 Parenteral_Protein 3.5 Ratio_enteral 32 Ratio_parenteral 68 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479459 SAMN18325444 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0015 User_sample_ID 15 Biomass_in_g 0.0254 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 84 Discharge_or_Death Discharge DNA_extraction_batch batch 01 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479460 SAMN18325572 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0143 User_sample_ID 143 Biomass_in_g 0.0248 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 29 Discharge_or_Death Discharge Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 3.5 Parenteral_Carbohydrate 9.82 Parenteral_Energy 105.71 Parenteral_Protein 3.5 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479461 SAMN18325570 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0141 User_sample_ID 141 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 45 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479462 SAMN18325832 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0403 User_sample_ID 403 Biomass_in_g 0.0262 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 88 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479463 SAMN18325571 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0142 User_sample_ID 142 Biomass_in_g 0.0265 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 52 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479464 SAMN18325833 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0404 User_sample_ID 404 Biomass_in_g 0.0283 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 22 Discharge_or_Death Discharge DNA_extraction_batch batch 06 Enteral_Carbohydrate 5.55 Enteral_Energy 83.16 Enteral_Fat 4.59 Enteral_Protein 2.65 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 30 Parental_Fat 0.8 Parenteral_Carbohydrate 4.87 Parenteral_Energy 44.11 Parenteral_Protein 2 Ratio_enteral 62 Ratio_parenteral 38 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479465 SAMN18325834 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0405 User_sample_ID 405 Biomass_in_g 0.025 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 58 Discharge_or_Death Discharge GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479466 SAMN18325836 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0407 User_sample_ID 407 Biomass_in_g 0.024 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 194 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity mature O2_max_at_birth 60 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479467 SAMN18325835 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0406 User_sample_ID 406 Biomass_in_g 0.0293 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479468 SAMN18325837 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0408 User_sample_ID 408 Biomass_in_g 0.026 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479469 SAMN18325643 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0214 User_sample_ID 214 Biomass_in_g 0.0256 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 68 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479470 SAMN18325645 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0216 User_sample_ID 216 Biomass_in_g 0.0241 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 70 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479471 SAMN18325644 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB17 JMF_sample_ID JMF-1906-2-0215 User_sample_ID 215 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 34 Birth_weight_in_g 703 Connatal_infection yes Days_in_hospital 68 Days_of_life 40 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 3164 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479472 SAMN18325646 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0217 User_sample_ID 217 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479473 SAMN18325647 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0218 User_sample_ID 218 Biomass_in_g 0.0255 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 84 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 4.52 Enteral_Energy 69.35 Enteral_Fat 3.73 Enteral_Protein 2.56 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 5.12 Parenteral_Energy 59.55 Parenteral_Protein 2.5 Ratio_enteral 54 Ratio_parenteral 46 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479474 SAMN18325753 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0324 User_sample_ID 324 Biomass_in_g 0.0212 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 14 Enteral_Carbohydrate 2.31 Enteral_Energy 33.54 Enteral_Fat 1.91 Enteral_Protein 0.8597 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2 Parenteral_Carbohydrate 6.35 Parenteral_Energy 70.67 Parenteral_Protein 3.5 Ratio_enteral 27 Ratio_parenteral 73 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479475 SAMN18325752 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0323 User_sample_ID 323 DNA_extraction_batch batch 14 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479476 SAMN18325754 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0325 User_sample_ID 325 Biomass_in_g 0.0262 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 5 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 1.33 Enteral_Energy 19.37 Enteral_Fat 1.1 Enteral_Protein 0.49655 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2.5 Parenteral_Carbohydrate 4.5 Parenteral_Energy 62.98 Parenteral_Protein 3 Ratio_enteral 13 Ratio_parenteral 87 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479477 SAMN18325755 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0326 User_sample_ID 326 Biomass_in_g 0.0156 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 3 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 0.93414 Enteral_Energy 13.59 Enteral_Fat 0.77419 Enteral_Protein 0.34839 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1.6 Parenteral_Carbohydrate 6.5 Parenteral_Energy 63.47 Parenteral_Protein 2.5 Ratio_enteral 11 Ratio_parenteral 89 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479478 SAMN18325756 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0327 User_sample_ID 327 Biomass_in_g 0.0216 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 72 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479479 SAMN18325838 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0409 User_sample_ID 409 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 18 Enteral_Carbohydrate 5.32 Enteral_Energy 79.62 Enteral_Fat 4.4 Enteral_Protein 2.54 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 45 Parental_Fat 0.5 Parenteral_Carbohydrate 5.2 Parenteral_Energy 44.97 Parenteral_Protein 2.5 Ratio_enteral 61 Ratio_parenteral 39 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479480 SAMN18325641 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0212 User_sample_ID 212 Biomass_in_g 0.0207 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 13 Enteral_Carbohydrate 7.79 Enteral_Energy 119.47 Enteral_Fat 6.43 Enteral_Protein 4.4 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 60 Parental_Fat 1 Parenteral_Carbohydrate 2.17 Parenteral_Energy 27.33 Parenteral_Protein 1.2 Ratio_enteral 80 Ratio_parenteral 20 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479481 SAMN18325642 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0213 User_sample_ID 213 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 28 Discharge_or_Death Discharge DNA_extraction_batch batch 13 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479482 SAMN18325439 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0010 User_sample_ID 10 Biomass_in_g 0.024 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 3.3 Enteral_Energy 48.06 Enteral_Fat 2.74 Enteral_Protein 1.23 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 45 Parental_Fat 1.5 Parenteral_Carbohydrate 7.22 Parenteral_Energy 70.64 Parenteral_Protein 3.5 Ratio_enteral 43 Ratio_parenteral 57 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479483 SAMN18325758 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0329 User_sample_ID 329 Biomass_in_g 0.0237 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 44 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 30 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479484 SAMN18325757 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB25 JMF_sample_ID JMF-1906-2-0328 User_sample_ID 328 Biomass_in_g 0.0228 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 860 Connatal_infection yes Days_in_hospital 70 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 1.54 Enteral_Energy 22.34 Enteral_Fat 1.27 Enteral_Protein 0.57273 GA 26+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 6.04 Parenteral_Energy 66.9 Parenteral_Protein 3 Ratio_enteral 19 Ratio_parenteral 81 Tokolysis no Tokolysis_days 0 Discharge_weight 2082 Discharge_length 41 Discharge_head_circumference 28 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1.56 m_leukocytes 15 m_antibiotics Standacillin LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479485 SAMN18325679 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB33 JMF_sample_ID JMF-1906-2-0250 User_sample_ID 250 Biomass_in_g 0.0227 Birth_head_circumference_in_cm 24 Birth_length_in_cm 30 Birth_weight_in_g 770 Connatal_infection unknown Days_in_hospital 79 Days_of_life 68 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 25+6 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Discharge_weight 2534 Discharge_length 46 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479486 SAMN18325455 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0026 User_sample_ID 26 Biomass_in_g 0.0296 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 82 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479487 SAMN18325681 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0252 User_sample_ID 252 Biomass_in_g 0.0218 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 68 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479488 SAMN18325680 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0251 User_sample_ID 251 Biomass_in_g 0.0234 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 95 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479489 SAMN18325682 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0253 User_sample_ID 253 Biomass_in_g 0.0211 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 0.33285 Enteral_Energy 4.84 Enteral_Fat 0.27586 Enteral_Protein 0.12414 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1.5 Parenteral_Carbohydrate 4 Parenteral_Energy 50.05 Parenteral_Protein 3 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479490 SAMN18325684 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0255 User_sample_ID 255 Biomass_in_g 0.0203 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 70 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 7.15 Enteral_Energy 95.86 Enteral_Fat 4.93 Enteral_Protein 1.69 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Parental_Fat 1.5 Parenteral_Carbohydrate 2.09 Parenteral_Energy 33.11 Parenteral_Protein 1.5 Ratio_enteral 78 Ratio_parenteral 22 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479491 SAMN18325683 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB36 JMF_sample_ID JMF-1906-2-0254 User_sample_ID 254 Biomass_in_g 0.0228 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33 Birth_weight_in_g 780 Connatal_infection no Days_in_hospital 68 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity early O2_max_at_birth 35 Tokolysis no Tokolysis_days 0 Discharge_weight 2084 Discharge_length 41 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.2 m_leukocytes 13.25 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479492 SAMN18325932 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB05 JMF_sample_ID JMF-1906-2-0503 User_sample_ID 503 Biomass_in_g 0.027 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33.5 Birth_weight_in_g 875 Connatal_infection yes Days_in_hospital 91 Days_of_life 73 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3652 Discharge_length 51 Discharge_head_circumference 37 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479493 SAMN18325931 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB05 JMF_sample_ID JMF-1906-2-0502 User_sample_ID 502 Biomass_in_g 0.028 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33.5 Birth_weight_in_g 875 Connatal_infection yes Days_in_hospital 91 Days_of_life 57 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3652 Discharge_length 51 Discharge_head_circumference 37 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479494 SAMN18325933 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB05 JMF_sample_ID JMF-1906-2-0504 User_sample_ID 504 Biomass_in_g 0.022 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33.5 Birth_weight_in_g 875 Connatal_infection yes Days_in_hospital 91 Days_of_life 84 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3652 Discharge_length 51 Discharge_head_circumference 37 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479495 SAMN18325934 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0505 User_sample_ID 505 Biomass_in_g 0.031 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 3 Discharge_or_Death Discharge Enteral_Carbohydrate 0.51481 Enteral_Energy 7.49 Enteral_Fat 0.42667 Enteral_Protein 0.192 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 6 Parenteral_Energy 64.6 Parenteral_Protein 2.5 Ratio_enteral 7 Ratio_parenteral 93 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479496 SAMN18325935 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0506 User_sample_ID 506 Biomass_in_g 0.027 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 7 Discharge_or_Death Discharge Enteral_Carbohydrate 2.48 Enteral_Energy 36.01 Enteral_Fat 2.05 Enteral_Protein 0.92308 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 3 Parenteral_Carbohydrate 7.3 Parenteral_Energy 86.17 Parenteral_Protein 3.5 Ratio_enteral 30 Ratio_parenteral 70 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479497 SAMN18325936 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0507 User_sample_ID 507 Biomass_in_g 0.029 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 14 Discharge_or_Death Discharge Enteral_Carbohydrate 5.52 Enteral_Energy 80.25 Enteral_Fat 4.57 Enteral_Protein 2.06 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 5.27 Parenteral_Energy 53.4 Parenteral_Protein 2 Ratio_enteral 63 Ratio_parenteral 37 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479498 SAMN18325937 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0508 User_sample_ID 508 Biomass_in_g 0.025 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 28 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479499 SAMN18325447 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0018 User_sample_ID 18 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 72 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479500 SAMN18325599 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB12 JMF_sample_ID JMF-1906-2-0170 User_sample_ID 170 Biomass_in_g 0.0201 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 800 Connatal_infection no Days_in_hospital 83 Days_of_life 1 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 0.25913 Enteral_Energy 3.77 Enteral_Fat 0.21477 Enteral_Protein 0.09664 GA 26+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1 Parenteral_Carbohydrate 5.37 Parenteral_Energy 48.96 Parenteral_Protein 2 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis no Tokolysis_days 0 Discharge_weight 2425 Discharge_length 44 Discharge_head_circumference 31.8 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.05 m_leukocytes 8 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479501 SAMN18325600 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0171 User_sample_ID 171 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 2.46 Enteral_Energy 35.86 Enteral_Fat 2.04 Enteral_Protein 0.91915 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 0.5 Parenteral_Carbohydrate 3.1 Parenteral_Energy 36.94 Parenteral_Protein 3.5 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479502 SAMN18325601 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0172 User_sample_ID 172 Biomass_in_g 0.022 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 4.74 Enteral_Energy 68.99 Enteral_Fat 3.93 Enteral_Protein 1.77 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 0.84003 Parenteral_Energy 33.96 Parenteral_Protein 3.5 Ratio_enteral 45 Ratio_parenteral 55 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479503 SAMN18325603 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0174 User_sample_ID 174 DNA_extraction_batch batch 11 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479504 SAMN18325602 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB15 JMF_sample_ID JMF-1906-2-0173 User_sample_ID 173 Biomass_in_g 0.0244 Birth_head_circumference_in_cm 22 Birth_length_in_cm 36 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 75 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 3.24 Enteral_Energy 47.13 Enteral_Fat 2.68 Enteral_Protein 1.21 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 6.26 Parenteral_Energy 75.15 Parenteral_Protein 3.5 Ratio_enteral 36 Ratio_parenteral 64 Tokolysis no Tokolysis_days 0 Discharge_weight 2670 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 4.85 m_leukocytes 17.6 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479505 SAMN18325604 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0175 User_sample_ID 175 DNA_extraction_batch batch 12 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479506 SAMN18325685 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0256 User_sample_ID 256 Biomass_in_g 0.0254 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 1.61 Enteral_Energy 23.34 Enteral_Fat 1.33 Enteral_Protein 0.60333 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 7 Parenteral_Energy 78.17 Parenteral_Protein 3.2 Ratio_enteral 22 Ratio_parenteral 78 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479507 SAMN18325686 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0257 User_sample_ID 257 Biomass_in_g 0.0252 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 34 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 7.71 Enteral_Energy 118.28 Enteral_Fat 6.37 Enteral_Protein 4.36 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 30 Parental_Fat 0 Parenteral_Carbohydrate 2.13 Parenteral_Energy 16.29 Parenteral_Protein 1 Ratio_enteral 84 Ratio_parenteral 16 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479508 SAMN18325687 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0258 User_sample_ID 258 Biomass_in_g 0.0211 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479509 SAMN18325688 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0259 User_sample_ID 259 Biomass_in_g 0.0212 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 80 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479510 SAMN18325689 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0260 User_sample_ID 260 Biomass_in_g 0.0214 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 7.25 Parenteral_Energy 80.83 Parenteral_Protein 3.5 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479511 SAMN18325690 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale Test sample env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0261 User_sample_ID 261 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479512 SAMN18325456 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0027 User_sample_ID 27 Biomass_in_g 0.0275 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 30 Discharge_or_Death Discharge DNA_extraction_batch batch 02 Enteral_Carbohydrate 7.93 Enteral_Energy 122.52 Enteral_Fat 6.62 Enteral_Protein 4.53 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0 Parenteral_Carbohydrate 3.29 Parenteral_Energy 19.04 Parenteral_Protein 0 Ratio_enteral 83 Ratio_parenteral 17 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479513 SAMN18325938 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0509 User_sample_ID 509 Biomass_in_g 0.022 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 42 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479514 SAMN18325481 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0052 User_sample_ID 52 Biomass_in_g 0.0248 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 89 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479515 SAMN18325939 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0510 User_sample_ID 510 Biomass_in_g 0.027 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 57 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479516 SAMN18325941 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0512 User_sample_ID 512 Biomass_in_g 0.027 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 84 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479517 SAMN18325940 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB06 JMF_sample_ID JMF-1906-2-0511 User_sample_ID 511 Biomass_in_g 0.029 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 815 Connatal_infection yes Days_in_hospital 91 Days_of_life 73 Discharge_or_Death Discharge GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 100 Tokolysis no Tokolysis_days 0 Twins PB05+PB06 Type_of_twin dc/da gemini Discharge_weight 3340 Discharge_length 48 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.74 m_leukocytes 10.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479518 SAMN18325942 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB07 JMF_sample_ID JMF-1906-2-0513 User_sample_ID 513 Biomass_in_g 0.032 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29.5 Birth_weight_in_g 545 Connatal_infection no Days_in_hospital 24 Days_of_life 2 Discharge_or_Death Death Enteral_Carbohydrate 0.35423 Enteral_Energy 5.15 Enteral_Fat 0.29358 Enteral_Protein 0.13211 GA 24+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.3 Parenteral_Carbohydrate 6 Parenteral_Energy 58.38 Parenteral_Protein 2.7 Ratio_enteral 6 Ratio_parenteral 94 Tokolysis no Tokolysis_days 0 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479519 SAMN18325943 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB07 JMF_sample_ID JMF-1906-2-0514 User_sample_ID 514 Biomass_in_g 0.033 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29.5 Birth_weight_in_g 545 Connatal_infection no Days_in_hospital 24 Days_of_life 7 Discharge_or_Death Death Enteral_Carbohydrate 0.72851 Enteral_Energy 10.6 Enteral_Fat 0.60377 Enteral_Protein 0.2717 GA 24+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 2 Parenteral_Carbohydrate 7.67 Parenteral_Energy 78.29 Parenteral_Protein 3.5 Ratio_enteral 7 Ratio_parenteral 93 Tokolysis no Tokolysis_days 0 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479520 SAMN18325691 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0262 User_sample_ID 262 Biomass_in_g 0.0262 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 88 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479521 SAMN18325692 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0263 User_sample_ID 263 Biomass_in_g 0.0245 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 22 Discharge_or_Death Discharge DNA_extraction_batch batch 07 Enteral_Carbohydrate 7.27 Enteral_Energy 111.56 Enteral_Fat 6.01 Enteral_Protein 4.11 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 45 Parental_Fat 0 Parenteral_Carbohydrate 3.34 Parenteral_Energy 27.27 Parenteral_Protein 2 Ratio_enteral 77 Ratio_parenteral 23 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479522 SAMN18325693 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0264 User_sample_ID 264 Biomass_in_g 0.0233 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479523 SAMN18325694 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB34 JMF_sample_ID JMF-1906-2-0265 User_sample_ID 265 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 31.5 Birth_weight_in_g 640 Connatal_infection unknown Days_in_hospital 96 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479524 SAMN18325695 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0266 User_sample_ID 266 Biomass_in_g 0.023 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479525 SAMN18325696 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0267 User_sample_ID 267 Biomass_in_g 0.0268 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Discharge_or_Death Discharge DNA_extraction_batch batch 07 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479526 SAMN18325809 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0380 User_sample_ID 380 Biomass_in_g 0.0222 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 16 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 5.87 Enteral_Energy 90.03 Enteral_Fat 4.85 Enteral_Protein 3.32 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0 Parenteral_Carbohydrate 4.32 Parenteral_Energy 30.9 Parenteral_Protein 1.5 Ratio_enteral 53 Ratio_parenteral 47 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479527 SAMN18325697 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB26 JMF_sample_ID JMF-1906-2-0268 User_sample_ID 268 Biomass_in_g 0.0223 Birth_head_circumference_in_cm 22 Birth_length_in_cm 31.5 Birth_weight_in_g 615 Connatal_infection no Days_in_hospital 88 Days_of_life 74 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 26+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2390 Discharge_length 44 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.31 m_leukocytes 21 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479528 SAMN18325468 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB41 JMF_sample_ID JMF-1906-2-0039 User_sample_ID 39 Biomass_in_g 0.0271 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 36 Birth_weight_in_g 870 Connatal_infection unknown Days_in_hospital 71 Days_of_life 63 Discharge_or_Death Discharge DNA_extraction_batch batch 03 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 55 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2242 Discharge_length 46 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479529 SAMN18325811 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB26 JMF_sample_ID JMF-1906-2-0382 User_sample_ID 382 Biomass_in_g 0.0283 Birth_head_circumference_in_cm 22 Birth_length_in_cm 31.5 Birth_weight_in_g 615 Connatal_infection no Days_in_hospital 88 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 26+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2390 Discharge_length 44 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.31 m_leukocytes 21 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479530 SAMN18325812 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0383 User_sample_ID 383 Biomass_in_g 0.0263 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 0.24132 Enteral_Energy 3.51 Enteral_Fat 0.2 Enteral_Protein 0.09 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 5.3 Parenteral_Energy 60.62 Parenteral_Protein 2.5 Ratio_enteral 3 Ratio_parenteral 97 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479531 SAMN18325810 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0381 User_sample_ID 381 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 33 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479532 SAMN18325813 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB29 JMF_sample_ID JMF-1906-2-0384 User_sample_ID 384 Biomass_in_g 0.0269 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 109 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 17 GA 24+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Tokolysis yes Tokolysis_days 2 Discharge_weight 2549 Discharge_length 45 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.05 m_leukocytes 7 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. gallolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479533 SAMN18325945 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0516 User_sample_ID 516 Biomass_in_g 0.025 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 2 Discharge_or_Death Discharge Enteral_Carbohydrate 0.34169 Enteral_Energy 4.97 Enteral_Fat 0.28319 Enteral_Protein 0.12743 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1.5 Parenteral_Carbohydrate 6 Parenteral_Energy 59.59 Parenteral_Protein 2.5 Ratio_enteral 4 Ratio_parenteral 96 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479534 SAMN18325944 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB07 JMF_sample_ID JMF-1906-2-0515 User_sample_ID 515 Biomass_in_g 0.036 Birth_head_circumference_in_cm 21 Birth_length_in_cm 29.5 Birth_weight_in_g 545 Connatal_infection no Days_in_hospital 24 Days_of_life 15 Discharge_or_Death Death Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 24+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1 Parenteral_Carbohydrate 6.12 Parenteral_Energy 57.43 Parenteral_Protein 3 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis no Tokolysis_days 0 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479535 SAMN18325814 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB31 JMF_sample_ID JMF-1906-2-0385 User_sample_ID 385 Biomass_in_g 0.0246 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33.5 Birth_weight_in_g 975 Connatal_infection no Days_in_hospital 57 Days_of_life 9 Discharge_or_Death Discharge DNA_extraction_batch batch 17 Enteral_Carbohydrate 4.91 Enteral_Energy 71.44 Enteral_Fat 4.07 Enteral_Protein 1.83 GA 27+5 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0.5 Parenteral_Carbohydrate 5.27 Parenteral_Energy 45.39 Parenteral_Protein 2.5 Ratio_enteral 57 Ratio_parenteral 43 Tokolysis no Discharge_weight 2046 Discharge_length 42.5 Discharge_head_circumference 25 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.98 m_leukocytes 17.33 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479536 SAMN18325946 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0517 User_sample_ID 517 Biomass_in_g 0.014 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 7 Discharge_or_Death Discharge Enteral_Carbohydrate 1.35 Enteral_Energy 19.71 Enteral_Fat 1.12 Enteral_Protein 0.50526 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0.5 Parenteral_Carbohydrate 4.6 Parenteral_Energy 43.7 Parenteral_Protein 3 Ratio_enteral 14 Ratio_parenteral 86 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479537 SAMN18325947 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0518 User_sample_ID 518 Biomass_in_g 0.021 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 13 Discharge_or_Death Discharge Enteral_Carbohydrate 1.83 Enteral_Energy 26.66 Enteral_Fat 1.52 Enteral_Protein 0.68327 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1 Parenteral_Carbohydrate 4.01 Parenteral_Energy 44.04 Parenteral_Protein 2.7 Ratio_enteral 21 Ratio_parenteral 79 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479538 SAMN18325949 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0520 User_sample_ID 520 Biomass_in_g 0.026 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 42 Discharge_or_Death Discharge Enteral_Carbohydrate 5.43 Enteral_Energy 83.32 Enteral_Fat 4.49 Enteral_Protein 3.07 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 1.2 Parenteral_Carbohydrate 5.23 Parenteral_Energy 51.37 Parenteral_Protein 2.3 Ratio_enteral 56 Ratio_parenteral 44 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479539 SAMN18325948 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0519 User_sample_ID 519 Biomass_in_g 0.029 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 28 Discharge_or_Death Discharge Enteral_Carbohydrate 8.36 Enteral_Energy 128.28 Enteral_Fat 6.91 Enteral_Protein 4.73 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0 Parenteral_Carbohydrate 1.59 Parenteral_Energy 9.2 Parenteral_Protein 0 Ratio_enteral 81 Ratio_parenteral 19 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479540 SAMN18325482 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0053 User_sample_ID 53 Biomass_in_g 0.021 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 70 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 50 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479541 SAMN18325605 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB11 JMF_sample_ID JMF-1906-2-0176 User_sample_ID 176 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 20 Birth_length_in_cm 28 Birth_weight_in_g 500 Connatal_infection yes Days_in_hospital 109 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 12 GA 23+0 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Tokolysis yes Tokolysis_days 1 Discharge_weight 3050 Discharge_length 51 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 4.1 m_leukocytes 24 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479542 SAMN18325607 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0178 User_sample_ID 178 Biomass_in_g 0.0231 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 2 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 0.36085 Enteral_Energy 5.25 Enteral_Fat 0.29907 Enteral_Protein 0.13458 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1 Parenteral_Carbohydrate 4.51 Parenteral_Energy 44.05 Parenteral_Protein 2 Ratio_enteral 5 Ratio_parenteral 95 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479543 SAMN18325608 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB15 JMF_sample_ID JMF-1906-2-0179 User_sample_ID 179 Biomass_in_g 0.0205 Birth_head_circumference_in_cm 22 Birth_length_in_cm 36 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 75 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 2.52 Enteral_Energy 36.72 Enteral_Fat 2.09 Enteral_Protein 0.94118 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 7.31 Parenteral_Energy 81.18 Parenteral_Protein 3.5 Ratio_enteral 26 Ratio_parenteral 74 Tokolysis no Tokolysis_days 0 Discharge_weight 2670 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 4.85 m_leukocytes 17.6 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479544 SAMN18325606 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB13 JMF_sample_ID JMF-1906-2-0177 User_sample_ID 177 Biomass_in_g 0.0224 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 29.5 Birth_weight_in_g 500 Connatal_infection no Days_in_hospital 95 Days_of_life 26 Discharge_or_Death Discharge DNA_extraction_batch batch 12 Enteral_Carbohydrate 6.38 Enteral_Energy 97.85 Enteral_Fat 5.27 Enteral_Protein 3.61 GA 26+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 0 Parenteral_Carbohydrate 3.27 Parenteral_Energy 22.87 Parenteral_Protein 1 Ratio_enteral 68 Ratio_parenteral 32 Tokolysis no Tokolysis_days 0 Discharge_weight 2215 Discharge_length 44 Discharge_head_circumference 33 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.63 m_leukocytes 12.56 m_antibiotics none LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479545 SAMN18325610 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0181 User_sample_ID 181 Biomass_in_g 0.0249 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 66 Discharge_or_Death Discharge DNA_extraction_batch batch 11 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479546 SAMN18325609 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB35 JMF_sample_ID JMF-1906-2-0180 User_sample_ID 180 Biomass_in_g 0.0233 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 790 Connatal_infection unknown Days_in_hospital 96 Days_of_life 17 Discharge_or_Death Discharge DNA_extraction_batch batch 11 Enteral_Carbohydrate 4.77 Enteral_Energy 69.47 Enteral_Fat 3.96 Enteral_Protein 1.78 GA 25+2 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 1.2 Parenteral_Carbohydrate 4.57 Parenteral_Energy 47.6 Parenteral_Protein 2.3 Ratio_enteral 55 Ratio_parenteral 45 Tokolysis yes Twins PB34+PB35 Type_of_twin dc/da gemini Discharge_weight 2962 Discharge_length 49 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479547 SAMN18325698 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0269 User_sample_ID 269 Biomass_in_g 0.0248 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 45 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity early O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479548 SAMN18325448 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0019 User_sample_ID 19 Biomass_in_g 0.0207 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 6.12 Enteral_Energy 93.92 Enteral_Fat 5.06 Enteral_Protein 3.46 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1 Parenteral_Carbohydrate 3.43 Parenteral_Energy 37.79 Parenteral_Protein 2 Ratio_enteral 67 Ratio_parenteral 33 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479549 SAMN18325699 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0270 User_sample_ID 270 Biomass_in_g 0.0284 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479550 SAMN18325457 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0028 User_sample_ID 28 Biomass_in_g 0.0275 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 24 Discharge_or_Death Discharge DNA_extraction_batch batch 04 Enteral_Carbohydrate 0 Enteral_Energy 0 Enteral_Fat 0 Enteral_Protein 0 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 50 Parental_Fat 1.5 Parenteral_Carbohydrate 8.2 Parenteral_Energy 72.27 Parenteral_Protein 2.5 Ratio_enteral 0 Ratio_parenteral 100 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479551 SAMN18325701 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB32 JMF_sample_ID JMF-1906-2-0272 User_sample_ID 272 Biomass_in_g 0.0264 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 710 Connatal_infection no Days_in_hospital 92 Days_of_life 26 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Discharge_weight 2258 Discharge_length 41 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 1 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.82 m_leukocytes 11 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479552 SAMN18325700 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0271 User_sample_ID 271 Biomass_in_g 0.0178 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479553 SAMN18325950 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0521 User_sample_ID 521 Biomass_in_g 0.025 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 55 Discharge_or_Death Discharge GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479554 SAMN18325951 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0522 User_sample_ID 522 Biomass_in_g 0.023 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 70 Discharge_or_Death Discharge GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479555 SAMN18325702 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB30 JMF_sample_ID JMF-1906-2-0273 User_sample_ID 273 Biomass_in_g 0.0256 Birth_head_circumference_in_cm 25 Birth_length_in_cm 32.5 Birth_weight_in_g 810 Connatal_infection yes Days_in_hospital 88 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 10 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis yes Tokolysis_days 1 Discharge_weight 3118 Discharge_length 47 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 7 m_leukocytes 26 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479556 SAMN18325560 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0131 User_sample_ID 131 Biomass_in_g 0.0218 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 40 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479557 SAMN18325952 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0523 User_sample_ID 523 Biomass_in_g 0.027 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 85 Discharge_or_Death Discharge GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479558 SAMN18325573 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0144 User_sample_ID 144 Biomass_in_g 0.0274 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 44 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 80 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479559 SAMN18325574 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0145 User_sample_ID 145 Biomass_in_g 0.0276 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 11 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 4.96 Enteral_Energy 72.1 Enteral_Fat 4.11 Enteral_Protein 1.85 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 1.5 Parenteral_Carbohydrate 4.25 Parenteral_Energy 51.54 Parenteral_Protein 3 Ratio_enteral 51 Ratio_parenteral 49 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479560 SAMN18325575 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0146 User_sample_ID 146 Biomass_in_g 0.0244 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 12 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 5.21 Enteral_Energy 75.74 Enteral_Fat 4.31 Enteral_Protein 1.94 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0.5 Parenteral_Carbohydrate 3.76 Parenteral_Energy 34.71 Parenteral_Protein 2 Ratio_enteral 63 Ratio_parenteral 37 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479561 SAMN18325576 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB39 JMF_sample_ID JMF-1906-2-0147 User_sample_ID 147 Biomass_in_g 0.0287 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 565 Connatal_infection yes Days_in_hospital 99 Days_of_life 95 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 2650 Discharge_length 45 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479562 SAMN18325577 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB42 JMF_sample_ID JMF-1906-2-0148 User_sample_ID 148 Biomass_in_g 0.0274 Birth_head_circumference_in_cm 25 Birth_length_in_cm 34 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 71 Days_of_life 70 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2496 Discharge_length 45.5 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479563 SAMN18325578 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB58 JMF_sample_ID JMF-1906-2-0149 User_sample_ID 149 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 29 Birth_weight_in_g 550 Connatal_infection unknown Days_in_hospital 8 Days_of_life 3 Discharge_or_Death Death DNA_extraction_batch batch 09 Enteral_Carbohydrate 0.68948 Enteral_Energy 10 Enteral_Fat 0.57143 Enteral_Protein 0.25857 GA 23+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 5.89 Parenteral_Energy 66.04 Parenteral_Protein 3 Ratio_enteral 8 Ratio_parenteral 92 Tokolysis no BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479564 SAMN18325579 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0150 User_sample_ID 150 Biomass_in_g 0.027 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Days_of_life 51 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 80 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479565 SAMN18325845 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB24 JMF_sample_ID JMF-1906-2-0416 User_sample_ID 416 Biomass_in_g 0.028 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 830 Connatal_infection no Days_in_hospital 88 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 25+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 2855 Discharge_length 46 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.69 m_leukocytes 23 m_antibiotics none LM complete Apg5 7 Apg10 7 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479566 SAMN18325846 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0417 User_sample_ID 417 DNA_extraction_batch batch 18 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479567 SAMN18325847 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB25 JMF_sample_ID JMF-1906-2-0418 User_sample_ID 418 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 860 Connatal_infection yes Days_in_hospital 70 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 2.18 Enteral_Energy 31.74 Enteral_Fat 1.81 Enteral_Protein 0.81356 GA 26+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2 Parenteral_Carbohydrate 4.54 Parenteral_Energy 58.24 Parenteral_Protein 3 Ratio_enteral 27 Ratio_parenteral 73 Tokolysis no Tokolysis_days 0 Discharge_weight 2082 Discharge_length 41 Discharge_head_circumference 28 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1.56 m_leukocytes 15 m_antibiotics Standacillin LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479568 SAMN18325848 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB26 JMF_sample_ID JMF-1906-2-0419 User_sample_ID 419 Biomass_in_g 0.0215 Birth_head_circumference_in_cm 22 Birth_length_in_cm 31.5 Birth_weight_in_g 615 Connatal_infection no Days_in_hospital 88 Days_of_life 4 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 0.59402 Enteral_Energy 8.64 Enteral_Fat 0.49231 Enteral_Protein 0.22154 GA 26+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 1.5 Parenteral_Carbohydrate 5.59 Parenteral_Energy 59.26 Parenteral_Protein 3 Ratio_enteral 7 Ratio_parenteral 93 Tokolysis no Tokolysis_days 0 Discharge_weight 2390 Discharge_length 44 Discharge_head_circumference 31 Intrauterine_growth_retardation 1 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.31 m_leukocytes 21 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479569 SAMN18325849 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB24 JMF_sample_ID JMF-1906-2-0420 User_sample_ID 420 Biomass_in_g 0.0257 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 830 Connatal_infection no Days_in_hospital 88 Days_of_life 14 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 5.44 Enteral_Energy 81.48 Enteral_Fat 4.5 Enteral_Protein 2.6 GA 25+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 0 Parenteral_Carbohydrate 3.31 Parenteral_Energy 27.06 Parenteral_Protein 2 Ratio_enteral 52 Ratio_parenteral 48 Tokolysis yes Tokolysis_days 2 Discharge_weight 2855 Discharge_length 46 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.69 m_leukocytes 23 m_antibiotics none LM complete Apg5 7 Apg10 7 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479570 SAMN18325472 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB59 JMF_sample_ID JMF-1906-2-0043 User_sample_ID 43 Biomass_in_g 0.0212 Birth_head_circumference_in_cm 25 Birth_length_in_cm 35 Birth_weight_in_g 960 Connatal_infection no Days_in_hospital 35 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 02 Enteral_Carbohydrate 3.86 Enteral_Energy 56 Enteral_Fat 3.2 Enteral_Protein 1.45 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Parental_Fat 2 Parenteral_Carbohydrate 4.71 Parenteral_Energy 59.2 Parenteral_Protein 3 Ratio_enteral 50 Ratio_parenteral 50 Tokolysis yes Type_of_twin dc/da gemini Intrauterine_growth_retardation 0 m_number_of_pregnancies 9 m_number_of_given_births 9 DM Sectio pPROM 0 m_CRP 1.25 m_leukocytes 14 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479571 SAMN18325766 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0337 User_sample_ID 337 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 16 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 5.05 Enteral_Energy 73.43 Enteral_Fat 4.18 Enteral_Protein 1.88 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1 Parenteral_Carbohydrate 2.11 Parenteral_Energy 32.21 Parenteral_Protein 2.5 Ratio_enteral 55 Ratio_parenteral 45 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479572 SAMN18325765 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0336 User_sample_ID 336 DNA_extraction_batch batch 16 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479573 SAMN18325850 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0421 User_sample_ID 421 Biomass_in_g 0.0275 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 199 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479574 SAMN18325767 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0338 User_sample_ID 338 Biomass_in_g 0.0249 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 177 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation Discharge Neuro_maturity mature O2_max_at_birth 30 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479575 SAMN18325768 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0339 User_sample_ID 339 Biomass_in_g 0.0287 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 176 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479576 SAMN18325769 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0340 User_sample_ID 340 Biomass_in_g 0.0276 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 41 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479577 SAMN18325464 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB50 JMF_sample_ID JMF-1906-2-0035 User_sample_ID 35 Biomass_in_g 0.0266 Birth_head_circumference_in_cm 26 Birth_length_in_cm 36 Birth_weight_in_g 940 Connatal_infection no Days_in_hospital 77 Days_of_life 72 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 30 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2912 Discharge_length 46 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. aureus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479578 SAMN18325851 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0422 User_sample_ID 422 Biomass_in_g 0.0244 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 4.54 Enteral_Energy 66.09 Enteral_Fat 3.76 Enteral_Protein 1.69 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 2.31 Parenteral_Energy 45.39 Parenteral_Protein 3 Ratio_enteral 50 Ratio_parenteral 50 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479579 SAMN18325770 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0341 User_sample_ID 341 Biomass_in_g 0.0231 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479580 SAMN18325854 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB28 JMF_sample_ID JMF-1906-2-0425 User_sample_ID 425 Biomass_in_g 0.026 Birth_head_circumference_in_cm 19.5 Birth_length_in_cm 29.5 Birth_weight_in_g 410 Connatal_infection no Days_in_hospital 8 Days_of_life 5 Discharge_or_Death Death DNA_extraction_batch batch 19 Enteral_Carbohydrate 0.86767 Enteral_Energy 12.62 Enteral_Fat 0.7191 Enteral_Protein 0.3236 GA 25+0 is_deceased yes is_healthy no is_twin no Last_mode_of_ventilation Death Mode_of_ventilation invasive Neuro_maturity early Parental_Fat 0.8 Parenteral_Carbohydrate 6.1 Parenteral_Energy 53.21 Parenteral_Protein 2.5 Ratio_enteral 9 Ratio_parenteral 91 Tokolysis no Tokolysis_days 0 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479581 SAMN18325853 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0424 User_sample_ID 424 Biomass_in_g 0.0258 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 59 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 6.49 Enteral_Energy 99.61 Enteral_Fat 5.36 Enteral_Protein 3.67 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 60 Parental_Fat 0 Parenteral_Carbohydrate 3.25 Parenteral_Energy 22.72 Parenteral_Protein 1 Ratio_enteral 76 Ratio_parenteral 24 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479582 SAMN18325852 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0423 User_sample_ID 423 Biomass_in_g 0.0284 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 85 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity early O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479583 SAMN18325855 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB45 JMF_sample_ID JMF-1906-2-0426 User_sample_ID 426 Biomass_in_g 0.0206 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 37 Birth_weight_in_g 950 Connatal_infection yes Days_in_hospital 81 Days_of_life 58 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 27+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 50 Tokolysis unknown Discharge_weight 3072 Discharge_length 48.5 Discharge_head_circumference 34.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 1.9 m_leukocytes 15.68 m_antibiotics Curam LM incomplete Apg5 7 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479584 SAMN18325856 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0427 User_sample_ID 427 Biomass_in_g 0.0242 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 117 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479585 SAMN18325857 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0428 User_sample_ID 428 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 72 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479586 SAMN18325772 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0343 User_sample_ID 343 Biomass_in_g 0.011 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 147 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479587 SAMN18325771 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0342 User_sample_ID 342 Biomass_in_g 0.0209 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 46 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479588 SAMN18325773 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB18 JMF_sample_ID JMF-1906-2-0344 User_sample_ID 344 Biomass_in_g 0.0285 Birth_head_circumference_in_cm 24 Birth_length_in_cm 33 Birth_weight_in_g 693 Connatal_infection unknown Days_in_hospital 108 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 24+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 3130 Discharge_length 47 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479589 SAMN18325774 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0345 User_sample_ID 345 Biomass_in_g 0.0291 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 16 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479590 SAMN18325776 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0347 User_sample_ID 347 DNA_extraction_batch batch 15 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479591 SAMN18325775 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0346 User_sample_ID 346 Biomass_in_g 0.0227 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 6 Discharge_or_Death Discharge DNA_extraction_batch batch 16 Enteral_Carbohydrate 2.82 Enteral_Energy 41.03 Enteral_Fat 2.34 Enteral_Protein 1.05 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 2 Parenteral_Carbohydrate 7.26 Parenteral_Energy 77.9 Parenteral_Protein 4 Ratio_enteral 34 Ratio_parenteral 66 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479592 SAMN18325777 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0348 User_sample_ID 348 Biomass_in_g 0.0278 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 13 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 3.58 Enteral_Energy 52.15 Enteral_Fat 2.97 Enteral_Protein 1.34 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 2 Parenteral_Carbohydrate 1.81 Parenteral_Energy 44.54 Parenteral_Protein 3.5 Ratio_enteral 37 Ratio_parenteral 63 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479593 SAMN18325858 256318 metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale negative control env_local_scale DNA extraction negative control env_medium water geo_loc_name Austria: Vienna host not applicable lat_lon 48.22 N 16.35 E JMF_sample_ID JMF-1906-2-0429 User_sample_ID 429 DNA_extraction_batch batch 19 BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479594 SAMN18325859 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB25 JMF_sample_ID JMF-1906-2-0430 User_sample_ID 430 Biomass_in_g 0.0267 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 860 Connatal_infection yes Days_in_hospital 70 Days_of_life 17 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 6.78 Enteral_Energy 98.65 Enteral_Fat 5.62 Enteral_Protein 2.53 GA 26+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 0 Parenteral_Carbohydrate 0.74085 Parenteral_Energy 8.29 Parenteral_Protein 1 Ratio_enteral 85 Ratio_parenteral 15 Tokolysis no Tokolysis_days 0 Discharge_weight 2082 Discharge_length 41 Discharge_head_circumference 28 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1.56 m_leukocytes 15 m_antibiotics Standacillin LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479595 SAMN18325473 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB53 JMF_sample_ID JMF-1906-2-0044 User_sample_ID 44 Biomass_in_g 0.0231 Birth_head_circumference_in_cm 24 Birth_length_in_cm 34.5 Birth_weight_in_g 925 Connatal_infection unknown Days_in_hospital 168 Days_of_life 63 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 5050 Discharge_length 59 Discharge_head_circumference 39 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.05 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479596 SAMN18325860 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0431 User_sample_ID 431 Biomass_in_g 0.0248 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 85 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity mature O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479597 SAMN18325861 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0432 User_sample_ID 432 Biomass_in_g 0.0292 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 71 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479598 SAMN18325862 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB27 JMF_sample_ID JMF-1906-2-0433 User_sample_ID 433 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 23 Birth_length_in_cm 32 Birth_weight_in_g 630 Connatal_infection no Days_in_hospital 86 Days_of_life 20 Discharge_or_Death Discharge DNA_extraction_batch batch 19 Enteral_Carbohydrate 8.21 Enteral_Energy 125.95 Enteral_Fat 6.78 Enteral_Protein 4.64 GA 25+6 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 40 Parental_Fat 0 Parenteral_Carbohydrate 1.27 Parenteral_Energy 9.34 Parenteral_Protein 0.5 Ratio_enteral 74 Ratio_parenteral 26 Tokolysis no Tokolysis_days 0 Discharge_weight 2528 Discharge_length 40 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.36 m_leukocytes 13.7 m_antibiotics none LM incomplete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479599 SAMN18325863 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0434 User_sample_ID 434 Biomass_in_g 0.0259 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 69 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 30 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479600 SAMN18325778 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0349 User_sample_ID 349 Biomass_in_g 0.022 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 10 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 5.02 Enteral_Energy 75.18 Enteral_Fat 4.15 Enteral_Protein 2.4 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 80 Parental_Fat 1 Parenteral_Carbohydrate 4.25 Parenteral_Energy 44.54 Parenteral_Protein 2.5 Ratio_enteral 56 Ratio_parenteral 44 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479601 SAMN18325779 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0350 User_sample_ID 350 Biomass_in_g 0.0247 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 32 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479602 SAMN18325780 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0351 User_sample_ID 351 Biomass_in_g 0.0238 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 8 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 4.77 Enteral_Energy 69.39 Enteral_Fat 3.95 Enteral_Protein 1.78 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Parental_Fat 1.5 Parenteral_Carbohydrate 5.78 Parenteral_Energy 60.33 Parenteral_Protein 3 Ratio_enteral 49 Ratio_parenteral 51 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479603 SAMN18325465 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0036 User_sample_ID 36 Biomass_in_g 0.0257 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 43 Discharge_or_Death Discharge DNA_extraction_batch batch 20 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479604 SAMN18325781 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB24 JMF_sample_ID JMF-1906-2-0352 User_sample_ID 352 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 830 Connatal_infection no Days_in_hospital 88 Days_of_life 7 Discharge_or_Death Discharge DNA_extraction_batch batch 15 Enteral_Carbohydrate 2.24 Enteral_Energy 32.62 Enteral_Fat 1.86 Enteral_Protein 0.83613 GA 25+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Parental_Fat 2.5 Parenteral_Carbohydrate 6.31 Parenteral_Energy 74.21 Parenteral_Protein 3.2 Ratio_enteral 24 Ratio_parenteral 76 Tokolysis yes Tokolysis_days 2 Discharge_weight 2855 Discharge_length 46 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.69 m_leukocytes 23 m_antibiotics none LM complete Apg5 7 Apg10 7 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479605 SAMN18325782 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB08 JMF_sample_ID JMF-1906-2-0353 User_sample_ID 353 Biomass_in_g 0.00827 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 28 Birth_weight_in_g 750 Connatal_infection unknown Days_in_hospital 266 Days_of_life 147 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 23+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 7400 Discharge_length 67 Discharge_head_circumference 44 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 1.7 m_leukocytes 14.3 m_antibiotics Standacillin/Clindamycin LM complete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 0 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479606 SAMN18325783 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0354 User_sample_ID 354 Biomass_in_g 0.0273 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 87 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479607 SAMN18325864 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB24 JMF_sample_ID JMF-1906-2-0435 User_sample_ID 435 Biomass_in_g 0.022 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 34 Birth_weight_in_g 830 Connatal_infection no Days_in_hospital 88 Days_of_life 39 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 25+3 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Tokolysis yes Tokolysis_days 2 Discharge_weight 2855 Discharge_length 46 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.69 m_leukocytes 23 m_antibiotics none LM complete Apg5 7 Apg10 7 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479608 SAMN18325865 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB21 JMF_sample_ID JMF-1906-2-0436 User_sample_ID 436 Biomass_in_g 0.0267 Birth_head_circumference_in_cm 20 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection no Days_in_hospital 77 Days_of_life 55 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 30 Tokolysis no Tokolysis_days 0 Discharge_weight 2070 Discharge_length 40 Discharge_head_circumference 30 Intrauterine_growth_retardation 1 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 0 m_CRP 0.28 m_leukocytes 7.1 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 1 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479609 SAMN18325866 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB16 JMF_sample_ID JMF-1906-2-0437 User_sample_ID 437 Biomass_in_g 0.0252 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 31 Birth_weight_in_g 618 Connatal_infection yes Days_in_hospital 68 Days_of_life 57 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 24+3 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Tokolysis yes Twins PB16+PB17 Type_of_twin dc/da gemini Discharge_weight 2714 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 7.7 m_leukocytes 17.6 m_antibiotics Standacillin/Clindamycin LM incomplete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479610 SAMN18325867 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB23 JMF_sample_ID JMF-1906-2-0438 User_sample_ID 438 Biomass_in_g 0.0227 Birth_head_circumference_in_cm 22.5 Birth_length_in_cm 33 Birth_weight_in_g 770 Connatal_infection yes Days_in_hospital 88 Days_of_life 49 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 25+3 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2380 Discharge_length 42.5 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 5.2 m_leukocytes 17.18 m_antibiotics Piperacillin/Tazobactam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 1 ROP 1 PDA 0 culture_pos_LOS GBS culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479611 SAMN18325868 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0439 User_sample_ID 439 Biomass_in_g 0.0227 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 58 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479612 SAMN18325869 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB22 JMF_sample_ID JMF-1906-2-0440 User_sample_ID 440 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 23 Birth_length_in_cm 33.5 Birth_weight_in_g 850 Connatal_infection yes Days_in_hospital 76 Days_of_life 43 Discharge_or_Death Discharge DNA_extraction_batch batch 19 GA 27+2 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity maturing O2_max_at_birth 60 Tokolysis no Tokolysis_days 0 Discharge_weight 2538 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 5 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 2.2 m_leukocytes 13 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479613 SAMN18325474 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB49 JMF_sample_ID JMF-1906-2-0045 User_sample_ID 45 Biomass_in_g 0.0277 Birth_head_circumference_in_cm 26 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection unknown Days_in_hospital 121 Days_of_life 119 Discharge_or_Death Discharge DNA_extraction_batch batch 02 GA 27+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 50 Tokolysis yes Discharge_weight 3978 Discharge_length 53 Discharge_head_circumference 38 Intrauterine_growth_retardation 0 m_number_of_pregnancies 7 m_number_of_given_births 5 DM Sectio pPROM 1 m_CRP 0.24 m_leukocytes 14.3 m_antibiotics Standacillin LM complete Apg5 8 Apg10 9 CSI 0 EOS 1 cLOS 0 BPD 0 NEC 1 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS E. coli BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479614 SAMN18325544 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB44 JMF_sample_ID JMF-1906-2-0115 User_sample_ID 115 Biomass_in_g 0.0219 Birth_head_circumference_in_cm 20.5 Birth_length_in_cm 33 Birth_weight_in_g 635 Connatal_infection yes Days_in_hospital 119 Days_of_life 106 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 23+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 40 Tokolysis unknown Discharge_weight 3105 Discharge_length 50.5 Discharge_head_circumference 36 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 1.05 m_leukocytes 14.34 m_antibiotics none LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479615 SAMN18325545 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB47 JMF_sample_ID JMF-1906-2-0116 User_sample_ID 116 Biomass_in_g 0.0226 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34.5 Birth_weight_in_g 935 Connatal_infection unknown Days_in_hospital 80 Discharge_or_Death Discharge DNA_extraction_batch batch 06 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge O2_max_at_birth 80 Tokolysis no Tokolysis_days 0 Discharge_weight 3038 Discharge_length 48 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 6 m_number_of_given_births 5 DM Spontan pPROM 0 m_CRP 3 m_leukocytes 17 m_antibiotics Standacillin LM none Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479616 SAMN18325547 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB41 JMF_sample_ID JMF-1906-2-0118 User_sample_ID 118 Biomass_in_g 0.0223 Birth_head_circumference_in_cm 23.5 Birth_length_in_cm 36 Birth_weight_in_g 870 Connatal_infection unknown Days_in_hospital 71 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 55 Tokolysis yes Tokolysis_days 0.5 Twins PB41+PB42 Type_of_twin dc/da gemini Discharge_weight 2242 Discharge_length 46 Discharge_head_circumference 31 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Spontan pPROM 1 m_CRP 0 m_leukocytes 9 m_antibiotics none LM incomplete Apg5 8 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479617 SAMN18325546 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB52 JMF_sample_ID JMF-1906-2-0117 User_sample_ID 117 Biomass_in_g 0.0287 Birth_head_circumference_in_cm 25 Birth_length_in_cm 33 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 83 Days_of_life 17 Discharge_or_Death Discharge DNA_extraction_batch batch 08 Enteral_Carbohydrate 6.57 Enteral_Energy 100.71 Enteral_Fat 5.42 Enteral_Protein 3.71 GA 26+1 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0.5 Parenteral_Carbohydrate 5.25 Parenteral_Energy 41.66 Parenteral_Protein 1.6 Ratio_enteral 68 Ratio_parenteral 32 Tokolysis unknown Discharge_weight 2460 Discharge_length 44.5 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.17 m_leukocytes 8.46 m_antibiotics Tazonam LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479618 SAMN18325548 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0119 User_sample_ID 119 Biomass_in_g 0.0246 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 30 Discharge_or_Death Discharge DNA_extraction_batch batch 05 Enteral_Carbohydrate 4.29 Enteral_Energy 62.42 Enteral_Fat 3.56 Enteral_Protein 1.6 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 85 Parental_Fat 1 Parenteral_Carbohydrate 6.26 Parenteral_Energy 56.09 Parenteral_Protein 2.5 Ratio_enteral 56 Ratio_parenteral 44 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479619 SAMN18325549 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB36 JMF_sample_ID JMF-1906-2-0120 User_sample_ID 120 Biomass_in_g 0.0229 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 33 Birth_weight_in_g 780 Connatal_infection no Days_in_hospital 68 Days_of_life 56 Discharge_or_Death Discharge DNA_extraction_batch batch 05 GA 27+5 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 35 Tokolysis no Tokolysis_days 0 Discharge_weight 2084 Discharge_length 41 Discharge_head_circumference 32 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 0.2 m_leukocytes 13.25 m_antibiotics none LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479620 SAMN18325442 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0013 User_sample_ID 13 Biomass_in_g 0.0245 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 38 Discharge_or_Death Discharge DNA_extraction_batch batch 01 Enteral_Carbohydrate 10.52 Enteral_Energy 162.43 Enteral_Fat 8.77 Enteral_Protein 6 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 0 Parenteral_Carbohydrate 0.48436 Parenteral_Energy 2.83 Parenteral_Protein 0 Ratio_enteral 92 Ratio_parenteral 8 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479621 SAMN18325784 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0355 User_sample_ID 355 Biomass_in_g 0.0237 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 45 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity mature O2_max_at_birth 80 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479622 SAMN18325785 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB20 JMF_sample_ID JMF-1906-2-0356 User_sample_ID 356 Biomass_in_g 0.0282 Birth_head_circumference_in_cm 25 Birth_length_in_cm 36 Birth_weight_in_g 960 Connatal_infection unknown Days_in_hospital 63 Days_of_life 52 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 27+0 has_EOS_neoKISS no has_LOS_neoKISS no is_deceased no is_healthy yes is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 80 Tokolysis yes Tokolysis_days 4 Discharge_weight 2087 Discharge_length 43 Discharge_head_circumference 30.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 4 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 0.58 m_leukocytes 9.1 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 0 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479623 SAMN18325786 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB19 JMF_sample_ID JMF-1906-2-0357 User_sample_ID 357 Biomass_in_g 0.0242 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30.5 Birth_weight_in_g 690 Connatal_infection unknown Days_in_hospital 108 Days_of_life 43 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 24+4 has_EOS_neoKISS yes has_LOS_neoKISS no is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 50 Tokolysis no Tokolysis_days 0 Twins PB18+PB19 Type_of_twin dc/da gemini Discharge_weight 2290 Discharge_length 44.5 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 0 m_CRP 1.7 m_leukocytes 9.6 m_antibiotics none LM incomplete Apg5 8 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479624 SAMN18325787 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB15 JMF_sample_ID JMF-1906-2-0358 User_sample_ID 358 Biomass_in_g 0.0218 Birth_head_circumference_in_cm 22 Birth_length_in_cm 36 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 75 Days_of_life 69 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation spontaneous Neuro_maturity mature O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 2670 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 4.85 m_leukocytes 17.6 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479625 SAMN18325789 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB15 JMF_sample_ID JMF-1906-2-0360 User_sample_ID 360 Biomass_in_g 0.0271 Birth_head_circumference_in_cm 22 Birth_length_in_cm 36 Birth_weight_in_g 795 Connatal_infection yes Days_in_hospital 75 Days_of_life 42 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 25+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 70 Tokolysis no Tokolysis_days 0 Discharge_weight 2670 Discharge_length 45 Discharge_head_circumference 31.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Sectio pPROM 1 m_CRP 4.85 m_leukocytes 17.6 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479626 SAMN18325788 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB14 JMF_sample_ID JMF-1906-2-0359 User_sample_ID 359 Biomass_in_g 0.0284 Birth_head_circumference_in_cm 21 Birth_length_in_cm 30 Birth_weight_in_g 530 Connatal_infection yes Days_in_hospital 132 Days_of_life 58 Discharge_or_Death Discharge DNA_extraction_batch batch 15 GA 23+5 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 100 Tokolysis yes Tokolysis_days 5 Discharge_weight 3090 Discharge_length 46 Discharge_head_circumference 32.5 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 0 m_antibiotics Unasyn LM complete Apg5 8 Apg10 9 CSI 1 EOS 0 cLOS 1 BPD 1 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479627 SAMN18325445 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB54 JMF_sample_ID JMF-1906-2-0016 User_sample_ID 16 Biomass_in_g 0.0243 Birth_head_circumference_in_cm 24.5 Birth_length_in_cm 34 Birth_weight_in_g 870 Connatal_infection yes Days_in_hospital 82 Discharge_or_Death Discharge DNA_extraction_batch batch 21 GA 26+2 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge O2_max_at_birth 70 Tokolysis no Twins PB54+PB55 Type_of_twin dc/da gemini Discharge_weight 2566 Discharge_length 47 Discharge_head_circumference 32.3 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 2 DM Spontan pPROM 1 m_CRP 1 m_leukocytes 10.6 m_antibiotics Tazonam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS S. haemolyticus culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479628 SAMN18325580 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB56 JMF_sample_ID JMF-1906-2-0151 User_sample_ID 151 Biomass_in_g 0.0217 Birth_head_circumference_in_cm 21.5 Birth_length_in_cm 30 Birth_weight_in_g 590 Connatal_infection no Days_in_hospital 131 Days_of_life 12 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 1.3 Enteral_Energy 18.92 Enteral_Fat 1.08 Enteral_Protein 0.48919 GA 24+0 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation invasive Neuro_maturity early O2_max_at_birth 70 Parental_Fat 2.5 Parenteral_Carbohydrate 6.3 Parenteral_Energy 77.45 Parenteral_Protein 4 Ratio_enteral 15 Ratio_parenteral 85 Tokolysis yes Twins PB56+PB57 Type_of_twin dc/da gemini Discharge_weight 3220 Discharge_length 50 Discharge_head_circumference 35 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Spontan pPROM 0 m_CRP 0.4 m_leukocytes 13.7 m_antibiotics Standacillin LM complete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 1 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479629 SAMN18325581 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0152 User_sample_ID 152 Biomass_in_g 0.0244 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 15 Discharge_or_Death Discharge DNA_extraction_batch batch 09 Enteral_Carbohydrate 5.32 Enteral_Energy 79.62 Enteral_Fat 4.4 Enteral_Protein 2.54 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 45 Parental_Fat 0.5 Parenteral_Carbohydrate 5.2 Parenteral_Energy 44.97 Parenteral_Protein 2.5 Ratio_enteral 61 Ratio_parenteral 39 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479630 SAMN18325582 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB48 JMF_sample_ID JMF-1906-2-0153 User_sample_ID 153 Biomass_in_g 0.0207 Birth_head_circumference_in_cm 23 Birth_length_in_cm 34 Birth_weight_in_g 820 Connatal_infection unknown Days_in_hospital 88 Days_of_life 39 Discharge_or_Death Discharge DNA_extraction_batch batch 04 GA 25+4 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin no Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity early O2_max_at_birth 100 Tokolysis yes Discharge_weight 2778 Discharge_length 49 Discharge_head_circumference 33 Intrauterine_growth_retardation 0 m_number_of_pregnancies 2 m_number_of_given_births 1 DM Sectio pPROM 1 m_antibiotics Curam LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 1 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479631 SAMN18325583 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex female host_subject_id PB51 JMF_sample_ID JMF-1906-2-0154 User_sample_ID 154 Biomass_in_g 0.028 Birth_head_circumference_in_cm 25.5 Birth_length_in_cm 37 Birth_weight_in_g 980 Connatal_infection no Days_in_hospital 73 Days_of_life 29 Discharge_or_Death Discharge DNA_extraction_batch batch 09 GA 27+4 has_EOS_neoKISS no has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation non-invasive Neuro_maturity maturing O2_max_at_birth 45 Tokolysis yes Tokolysis_days 1 Twins PB50+PB51 Type_of_twin dc/da gemini Discharge_weight 2646 Discharge_length 45.5 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 0.4 m_leukocytes 14.88 m_antibiotics Standacillin/Zithromax LM incomplete Apg5 9 Apg10 9 CSI 0 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS S. epidermidis culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut SRS8479632 SAMN18325584 408170 human gut metagenome bioproject 715072 PRJNA715072 collection_date 2017 env_broad_scale human env_local_scale gut env_medium stool geo_loc_name Austria: Vienna host Homo sapiens lat_lon 48.22 N 16.35 E host_sex male host_subject_id PB38 JMF_sample_ID JMF-1906-2-0155 User_sample_ID 155 Biomass_in_g 0.0283 Birth_head_circumference_in_cm 23 Birth_length_in_cm 31.5 Birth_weight_in_g 710 Connatal_infection yes Days_in_hospital 99 Days_of_life 85 Discharge_or_Death Discharge DNA_extraction_batch batch 18 GA 24+1 has_EOS_neoKISS yes has_LOS_neoKISS yes is_deceased no is_healthy no is_twin yes Last_mode_of_ventilation Discharge Mode_of_ventilation supported Neuro_maturity maturing O2_max_at_birth 85 Tokolysis yes Tokolysis_days 1 Twins PB38+PB39 Type_of_twin dc/da gemini Discharge_weight 3022 Discharge_length 48 Discharge_head_circumference 34 Intrauterine_growth_retardation 0 m_number_of_pregnancies 1 m_number_of_given_births 1 DM Sectio pPROM 1 m_CRP 3.6 m_leukocytes 18 m_antibiotics Standacillin LM incomplete Apg5 5 Apg10 8 CSI 1 EOS 0 cLOS 0 BPD 0 NEC 0 ROP 1 PDA 0 culture_pos_LOS none culture_pos_EOS none BioSampleModel MIMARKS.survey BioSampleModel MIGS/MIMS/MIMARKS.human-gut