<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <EXPERIMENT accession="SRX10432615" alias="Lysobacter_caseinilyticus_Nanopore">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10432615</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB9356361">Lysobacter_caseinilyticus_Nanopore</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Nanopore genome sequencing of Lysobacter caseinilyticus</TITLE>
    <STUDY_REF accession="SRP311923">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP311923</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA716779</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Genome extraction and purification were carried out using the Genomic-tip 20/G kit (Qiagen). The preparation of long read sequence library was performed using the rapid barcoding kit (SQK-RBK004; Oxford Nanopore Technologies), and the library was sequenced in a  FLO-MIN 106 flow cell on the GridION device (Oxford Nanopore Technologies).Illumina sequencing for error correction was prepared using a KAPA HyperPlus kit (Kapa Biosystems), and the library was sequenced on a NextSeq 500 sequencer using 75-cycle high-output mode (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS8566249">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8566249</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN18451832</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Lysobacter_caseinilyticus_Nanopore</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <OXFORD_NANOPORE>
        <INSTRUMENT_MODEL>GridION</INSTRUMENT_MODEL>
      </OXFORD_NANOPORE>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX10432616" alias="Lysobacter_caseinilyticus_illumina">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX10432616</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB9356361">Lysobacter_caseinilyticus_illumina</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>Illumina genome sequencing of Lysobacter caseinilyticus</TITLE>
    <STUDY_REF accession="SRP311923">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP311923</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioProject">PRJNA716779</EXTERNAL_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Genome extraction and purification were carried out using the Genomic-tip 20/G kit (Qiagen). The preparation of long read sequence library was performed using the rapid barcoding kit (SQK-RBK004; Oxford Nanopore Technologies), and the library was sequenced in a  FLO-MIN 106 flow cell on the GridION device (Oxford Nanopore Technologies).Illumina sequencing for error correction was prepared using a KAPA HyperPlus kit (Kapa Biosystems), and the library was sequenced on a NextSeq 500 sequencer using 75-cycle high-output mode (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS8566249">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS8566249</PRIMARY_ID>
          <EXTERNAL_ID namespace="BioSample">SAMN18451832</EXTERNAL_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>Lysobacter_caseinilyticus_illumina</LIBRARY_NAME>
        <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>NextSeq 500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
