SRX10488600 GSM5220904 SRP312865 SRS8614970 GSM5220904 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220904 GSM5220904 GEO Accession GSM5220904 SRX10488601 GSM5220905 SRP312865 SRS8614971 GSM5220905 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220905 GSM5220905 GEO Accession GSM5220905 SRX10488602 GSM5220906 SRP312865 SRS8614973 GSM5220906 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220906 GSM5220906 GEO Accession GSM5220906 SRX10488603 GSM5220907 SRP312865 SRS8614972 GSM5220907 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220907 GSM5220907 GEO Accession GSM5220907 SRX10488604 GSM5220908 SRP312865 SRS8614975 GSM5220908 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220908 GSM5220908 GEO Accession GSM5220908 SRX10488605 GSM5220909 SRP312865 SRS8614974 GSM5220909 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220909 GSM5220909 GEO Accession GSM5220909 SRX10488606 GSM5220910 SRP312865 SRS8614977 GSM5220910 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220910 GSM5220910 GEO Accession GSM5220910 SRX10488607 GSM5220911 SRP312865 SRS8614976 GSM5220911 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220911 GSM5220911 GEO Accession GSM5220911 SRX10488608 GSM5220912 SRP312865 SRS8614978 GSM5220912 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220912 GSM5220912 GEO Accession GSM5220912 SRX10488609 GSM5220913 SRP312865 SRS8614979 GSM5220913 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220913 GSM5220913 GEO Accession GSM5220913 SRX10488610 GSM5220914 SRP312865 SRS8614980 GSM5220914 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220914 GSM5220914 GEO Accession GSM5220914 SRX10488611 GSM5220915 SRP312865 SRS8614981 GSM5220915 RNA-Seq TRANSCRIPTOMIC cDNA Trizol based RNA extraction TruSeq stranded mRNA LT libraries were prepared according to Illumina protocol 15031047 Rev. E, starting from 300 ng of RNA, quantified by qubit DNA HS, profiled on TapeStation 4200, and sequenced on an Illumina HiSeq 4000 at a targeted depth of 36 Mreads/sample and paired-end read length of 81,8i,8i,81. The reads were trimmed for adapters with bcl2fastq v2.20.0, aligned to the mouse genome mm10 with STAR 2.7.0e, and a count matrix was assembled using the cellranger v4.0 curation of ENSEMBL annotations Illumina HiSeq 4000 gds 305220915 GSM5220915 GEO Accession GSM5220915