GSM5404487: Input_S767; Human immunodeficiency virus 1; OTHER

SRX11243569 GSM5404487 GSM5404487: Input_S767; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289526 GSM5404487 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404487 GSM5404487 GEO Accession GSM5404487 SRX11243570 GSM5404488 GSM5404488: Input_Y768; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289525 GSM5404488 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404488 GSM5404488 GEO Accession GSM5404488 SRX11243571 GSM5404489 GSM5404489: Input_H769; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289527 GSM5404489 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404489 GSM5404489 GEO Accession GSM5404489 SRX11243572 GSM5404490 GSM5404490: Input_R770; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289528 GSM5404490 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404490 GSM5404490 GEO Accession GSM5404490 SRX11243573 GSM5404491 GSM5404491: Input_L771; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289529 GSM5404491 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404491 GSM5404491 GEO Accession GSM5404491 SRX11243574 GSM5404492 GSM5404492: Input_R772; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289530 GSM5404492 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404492 GSM5404492 GEO Accession GSM5404492 SRX11243575 GSM5404493 GSM5404493: Input_D773; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289532 GSM5404493 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404493 GSM5404493 GEO Accession GSM5404493 SRX11243576 GSM5404494 GSM5404494: Input_L774; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289531 GSM5404494 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404494 GSM5404494 GEO Accession GSM5404494 SRX11243577 GSM5404495 GSM5404495: Input_L775; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289533 GSM5404495 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404495 GSM5404495 GEO Accession GSM5404495 SRX11243578 GSM5404496 GSM5404496: Input_L776; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289534 GSM5404496 OTHER GENOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404496 GSM5404496 GEO Accession GSM5404496 SRX11243579 GSM5404497 GSM5404497: Rep1_S767; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289535 GSM5404497 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404497 GSM5404497 GEO Accession GSM5404497 SRX11243580 GSM5404498 GSM5404498: Rep2_S767; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289536 GSM5404498 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404498 GSM5404498 GEO Accession GSM5404498 SRX11243581 GSM5404499 GSM5404499: Rep3_S767; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289537 GSM5404499 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404499 GSM5404499 GEO Accession GSM5404499 SRX11243582 GSM5404500 GSM5404500: Rep4_S767; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289538 GSM5404500 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404500 GSM5404500 GEO Accession GSM5404500 SRX11243583 GSM5404501 GSM5404501: Rep5_S767; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289539 GSM5404501 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404501 GSM5404501 GEO Accession GSM5404501 SRX11243584 GSM5404502 GSM5404502: Rep6_S767; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289540 GSM5404502 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404502 GSM5404502 GEO Accession GSM5404502 SRX11243585 GSM5404503 GSM5404503: Rep1_Y768; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289542 GSM5404503 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404503 GSM5404503 GEO Accession GSM5404503 SRX11243586 GSM5404504 GSM5404504: Rep2_Y768; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289541 GSM5404504 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404504 GSM5404504 GEO Accession GSM5404504 SRX11243587 GSM5404505 GSM5404505: Rep3_Y768; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289543 GSM5404505 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404505 GSM5404505 GEO Accession GSM5404505 SRX11243588 GSM5404506 GSM5404506: Rep4_Y768; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289544 GSM5404506 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404506 GSM5404506 GEO Accession GSM5404506 SRX11243589 GSM5404507 GSM5404507: Rep5_Y768; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289545 GSM5404507 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404507 GSM5404507 GEO Accession GSM5404507 SRX11243590 GSM5404508 GSM5404508: Rep6_Y768; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289546 GSM5404508 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404508 GSM5404508 GEO Accession GSM5404508 SRX11243591 GSM5404509 GSM5404509: Rep1_H769; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289547 GSM5404509 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404509 GSM5404509 GEO Accession GSM5404509 SRX11243592 GSM5404510 GSM5404510: Rep2_H769; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289549 GSM5404510 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404510 GSM5404510 GEO Accession GSM5404510 SRX11243593 GSM5404511 GSM5404511: Rep3_H769; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289548 GSM5404511 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404511 GSM5404511 GEO Accession GSM5404511 SRX11243594 GSM5404512 GSM5404512: Rep4_H769; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289550 GSM5404512 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404512 GSM5404512 GEO Accession GSM5404512 SRX11243595 GSM5404513 GSM5404513: Rep5_H769; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289551 GSM5404513 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404513 GSM5404513 GEO Accession GSM5404513 SRX11243596 GSM5404514 GSM5404514: Rep6_H769; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289552 GSM5404514 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404514 GSM5404514 GEO Accession GSM5404514 SRX11243597 GSM5404515 GSM5404515: Rep1_R770; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289554 GSM5404515 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404515 GSM5404515 GEO Accession GSM5404515 SRX11243598 GSM5404516 GSM5404516: Rep2_R770; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289553 GSM5404516 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404516 GSM5404516 GEO Accession GSM5404516 SRX11243599 GSM5404517 GSM5404517: Rep3_R770; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289555 GSM5404517 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404517 GSM5404517 GEO Accession GSM5404517 SRX11243600 GSM5404518 GSM5404518: Rep4_R770; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289556 GSM5404518 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404518 GSM5404518 GEO Accession GSM5404518 SRX11243601 GSM5404519 GSM5404519: Rep5_R770; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289557 GSM5404519 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404519 GSM5404519 GEO Accession GSM5404519 SRX11243602 GSM5404520 GSM5404520: Rep6_R770; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289558 GSM5404520 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404520 GSM5404520 GEO Accession GSM5404520 SRX11243603 GSM5404521 GSM5404521: Rep1_L771; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289559 GSM5404521 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404521 GSM5404521 GEO Accession GSM5404521 SRX11243604 GSM5404522 GSM5404522: Rep2_L771; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289560 GSM5404522 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404522 GSM5404522 GEO Accession GSM5404522 SRX11243605 GSM5404523 GSM5404523: Rep3_L771; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289562 GSM5404523 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404523 GSM5404523 GEO Accession GSM5404523 SRX11243606 GSM5404524 GSM5404524: Rep4_L771; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289561 GSM5404524 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404524 GSM5404524 GEO Accession GSM5404524 SRX11243607 GSM5404525 GSM5404525: Rep5_L771; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289563 GSM5404525 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404525 GSM5404525 GEO Accession GSM5404525 SRX11243608 GSM5404526 GSM5404526: Rep6_L771; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289565 GSM5404526 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404526 GSM5404526 GEO Accession GSM5404526 SRX11243609 GSM5404527 GSM5404527: Rep1_R772; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289564 GSM5404527 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404527 GSM5404527 GEO Accession GSM5404527 SRX11243610 GSM5404528 GSM5404528: Rep2_R772; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289566 GSM5404528 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404528 GSM5404528 GEO Accession GSM5404528 SRX11243611 GSM5404529 GSM5404529: Rep3_R772; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289568 GSM5404529 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404529 GSM5404529 GEO Accession GSM5404529 SRX11243612 GSM5404530 GSM5404530: Rep4_R772; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289567 GSM5404530 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404530 GSM5404530 GEO Accession GSM5404530 SRX11243613 GSM5404531 GSM5404531: Rep5_R772; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289569 GSM5404531 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404531 GSM5404531 GEO Accession GSM5404531 SRX11243614 GSM5404532 GSM5404532: Rep6_R772; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289570 GSM5404532 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404532 GSM5404532 GEO Accession GSM5404532 SRX11243615 GSM5404533 GSM5404533: Rep1_D773; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289571 GSM5404533 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404533 GSM5404533 GEO Accession GSM5404533 SRX11243616 GSM5404534 GSM5404534: Rep2_D773; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289572 GSM5404534 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404534 GSM5404534 GEO Accession GSM5404534 SRX11243617 GSM5404535 GSM5404535: Rep3_D773; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289573 GSM5404535 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404535 GSM5404535 GEO Accession GSM5404535 SRX11243618 GSM5404536 GSM5404536: Rep4_D773; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289574 GSM5404536 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404536 GSM5404536 GEO Accession GSM5404536 SRX11243619 GSM5404537 GSM5404537: Rep5_D773; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289575 GSM5404537 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404537 GSM5404537 GEO Accession GSM5404537 SRX11243620 GSM5404538 GSM5404538: Rep6_D773; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289576 GSM5404538 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404538 GSM5404538 GEO Accession GSM5404538 SRX11243621 GSM5404539 GSM5404539: Rep1_L774; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289577 GSM5404539 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404539 GSM5404539 GEO Accession GSM5404539 SRX11243622 GSM5404540 GSM5404540: Rep2_L774; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289578 GSM5404540 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404540 GSM5404540 GEO Accession GSM5404540 SRX11243623 GSM5404541 GSM5404541: Rep3_L774; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289579 GSM5404541 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404541 GSM5404541 GEO Accession GSM5404541 SRX11243624 GSM5404542 GSM5404542: Rep4_L774; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289580 GSM5404542 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404542 GSM5404542 GEO Accession GSM5404542 SRX11243625 GSM5404543 GSM5404543: Rep5_L774; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289581 GSM5404543 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404543 GSM5404543 GEO Accession GSM5404543 SRX11243626 GSM5404544 GSM5404544: Rep6_L774; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289582 GSM5404544 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404544 GSM5404544 GEO Accession GSM5404544 SRX11243627 GSM5404545 GSM5404545: Rep1_L775; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289583 GSM5404545 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404545 GSM5404545 GEO Accession GSM5404545 SRX11243628 GSM5404546 GSM5404546: Rep2_L775; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289584 GSM5404546 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404546 GSM5404546 GEO Accession GSM5404546 SRX11243629 GSM5404547 GSM5404547: Rep3_L775; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289585 GSM5404547 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404547 GSM5404547 GEO Accession GSM5404547 SRX11243630 GSM5404548 GSM5404548: Rep4_L775; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289586 GSM5404548 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404548 GSM5404548 GEO Accession GSM5404548 SRX11243631 GSM5404549 GSM5404549: Rep5_L775; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289587 GSM5404549 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404549 GSM5404549 GEO Accession GSM5404549 SRX11243632 GSM5404550 GSM5404550: Rep6_L775; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289588 GSM5404550 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404550 GSM5404550 GEO Accession GSM5404550 SRX11243633 GSM5404551 GSM5404551: Rep1_L776; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289589 GSM5404551 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404551 GSM5404551 GEO Accession GSM5404551 SRX11243634 GSM5404552 GSM5404552: Rep2_L776; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289590 GSM5404552 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404552 GSM5404552 GEO Accession GSM5404552 SRX11243635 GSM5404553 GSM5404553: Rep3_L776; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289591 GSM5404553 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404553 GSM5404553 GEO Accession GSM5404553 SRX11243636 GSM5404554 GSM5404554: Rep4_L776; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289592 GSM5404554 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404554 GSM5404554 GEO Accession GSM5404554 SRX11243637 GSM5404555 GSM5404555: Rep5_L776; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289593 GSM5404555 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404555 GSM5404555 GEO Accession GSM5404555 SRX11243638 GSM5404556 GSM5404556: Rep6_L776; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289594 GSM5404556 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404556 GSM5404556 GEO Accession GSM5404556 SRX11243639 GSM5404557 GSM5404557: Rep1_WT; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289596 GSM5404557 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404557 GSM5404557 GEO Accession GSM5404557 SRX11243640 GSM5404558 GSM5404558: Rep2_WT; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289595 GSM5404558 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404558 GSM5404558 GEO Accession GSM5404558 SRX11243641 GSM5404559 GSM5404559: Rep3_WT; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289597 GSM5404559 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404559 GSM5404559 GEO Accession GSM5404559 SRX11243642 GSM5404560 GSM5404560: Rep4_WT; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289598 GSM5404560 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404560 GSM5404560 GEO Accession GSM5404560 SRX11243643 GSM5404561 GSM5404561: Rep5_WT; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289599 GSM5404561 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404561 GSM5404561 GEO Accession GSM5404561 SRX11243644 GSM5404562 GSM5404562: Rep6_WT; Human immunodeficiency virus 1; OTHER SRP325862 SRS9289600 GSM5404562 OTHER TRANSCRIPTOMIC other RNA was extracted from virions by ZR-96 Viral RNA extraction kits (Zymo) and eluted in 15 ul water. cDNA was amplified from 5uL of extracted RNA using the iScript Advanced (BioRad) cDNA synthesis. PCR amplicons were made from DNA using primers specific to the Env LLP-2 region Illumina MiSeq gds 305404562 GSM5404562 GEO Accession GSM5404562