<?xml version="1.0" encoding="UTF-8"?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <STUDY center_name="GEO" alias="GSE179329" accession="SRP326663">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP326663</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA743293</EXTERNAL_ID>
      <EXTERNAL_ID namespace="GEO">GSE179329</EXTERNAL_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>Total RNA transcriptome analysis of hypoxia with sgSETDB1 in hela cells</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Transcriptome Analysis"/>
      <STUDY_ABSTRACT>Purpose: The goals of this study are to compare NGS-derived Hela with sgSETDB1 and shcontrol in hypoxia transcriptome profiling (RNA-seq) to quantitative reverse transcription polymerase chain reaction (qRT–PCR) methods Overall design: Methods: mRNA profiles of sgControl hela and sgSETDB1 with or hypoxia (1% O2) for 6 hours were generated by deep sequencing, in duplicate.  Hierarchical clustering was performed, qRT–PCR validation was performed</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>GSE179329</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
    <STUDY_LINKS>
      <STUDY_LINK>
        <XREF_LINK>
          <DB>pubmed</DB>
          <ID>37850636</ID>
        </XREF_LINK>
      </STUDY_LINK>
    </STUDY_LINKS>
    <STUDY_ATTRIBUTES>
      <STUDY_ATTRIBUTE>
        <TAG>parent_bioproject</TAG>
        <VALUE>PRJNA743284</VALUE>
      </STUDY_ATTRIBUTE>
    </STUDY_ATTRIBUTES>
  </STUDY>
</STUDY_SET>
