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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
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    <TITLE>methylCap-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
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        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
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    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
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      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS9550994</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_CORT_1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_CORT_1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX11512810" alias="lib_meDNA_TF_CTRL_2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512810</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_meDNA_TF_CTRL_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>methylCap-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Purification of methylated DNA was carried out by affinity columns with methyl-DNA binding proteins (MethylCap Kit), following the manufacturer's protocol (Diagenode, Denville, NJ). Only the fractions corresponding to moderate to high levels of DNA methylation were kept. Libraries were prepared using NEXTflex ChIP-Seq Kit ( Bioo Scientific), using 30 ng of purified genomic DNA.</DESIGN_DESCRIPTION>
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        <IDENTIFIERS>
          <PRIMARY_ID>SRS9550995</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">meDNA_TF_CTRL_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_meDNA_TF_CTRL_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>MeDIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>MBD2 protein methyl-CpG binding domain</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512811</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_meDNA_TF_T3_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>methylCap-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Purification of methylated DNA was carried out by affinity columns with methyl-DNA binding proteins (MethylCap Kit), following the manufacturer's protocol (Diagenode, Denville, NJ). Only the fractions corresponding to moderate to high levels of DNA methylation were kept. Libraries were prepared using NEXTflex ChIP-Seq Kit ( Bioo Scientific), using 30 ng of purified genomic DNA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9550996">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9550996</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">meDNA_TF_T3_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_meDNA_TF_T3_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>MeDIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>MBD2 protein methyl-CpG binding domain</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512812</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_meDNA_TF_CORT_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>methylCap-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Purification of methylated DNA was carried out by affinity columns with methyl-DNA binding proteins (MethylCap Kit), following the manufacturer's protocol (Diagenode, Denville, NJ). Only the fractions corresponding to moderate to high levels of DNA methylation were kept. Libraries were prepared using NEXTflex ChIP-Seq Kit ( Bioo Scientific), using 30 ng of purified genomic DNA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9550997">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9550997</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">meDNA_TF_CORT_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_meDNA_TF_CORT_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>MeDIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>MBD2 protein methyl-CpG binding domain</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX11512813" alias="lib_meDNA_TF_T3CORT_2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512813</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_meDNA_TF_T3CORT_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>methylCap-Seq of Xenopus tropicalis : Tailfin (whole animal)</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Purification of methylated DNA was carried out by affinity columns with methyl-DNA binding proteins (MethylCap Kit), following the manufacturer's protocol (Diagenode, Denville, NJ). Only the fractions corresponding to moderate to high levels of DNA methylation were kept. Libraries were prepared using NEXTflex ChIP-Seq Kit ( Bioo Scientific), using 30 ng of purified genomic DNA.</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9550998">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9550998</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">meDNA_TF_T3CORT_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_meDNA_TF_T3CORT_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>MeDIP-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>MBD2 protein methyl-CpG binding domain</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512814</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_TFC_T3CORT_1</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9550999">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9550999</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_T3CORT_1</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_T3CORT_1</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX11512815" alias="lib_TFC_CTRL_2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512815</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_TFC_CTRL_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9551000">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9551000</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_CTRL_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_CTRL_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX11512816" alias="lib_TFC_T3_2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512816</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_TFC_T3_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9551001">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9551001</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_T3_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_T3_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
  <EXPERIMENT accession="SRX11512817" alias="lib_TFC_CORT_2">
    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512817</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_TFC_CORT_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9551002">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9551002</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_CORT_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_CORT_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512818</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_TFC_T3CORT_2</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
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      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9551003">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9551003</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_T3CORT_2</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_T3CORT_2</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512819</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_TFC_CTRL_3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9551004">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9551004</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_CTRL_3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_CTRL_3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
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    <IDENTIFIERS>
      <PRIMARY_ID>SRX11512820</PRIMARY_ID>
      <SUBMITTER_ID namespace="SUB10045460">lib_TFC_T3_3</SUBMITTER_ID>
    </IDENTIFIERS>
    <TITLE>RNA-Seq of Xenopus tropicalis : Tailfin explant culture</TITLE>
    <STUDY_REF accession="SRP329229">
      <IDENTIFIERS>
        <PRIMARY_ID>SRP329229</PRIMARY_ID>
        <SUBMITTER_ID namespace="SUB10045460">bp0</SUBMITTER_ID>
      </IDENTIFIERS>
    </STUDY_REF>
    <DESIGN>
      <DESIGN_DESCRIPTION>Tissues were lysed in 500 l of RNAble (Eurobio) using the Tissue Lyser II apparatus (QIAGEN), and 100 L of chloroform. RNAs were purified from supernatant with the RNeasy MinElute Cleanup kit (ref: 74204, QIAGEN) according to the manufacturer's instructions. Libraries were prepared from mRNA purifierd from 1g of total RNA, using the strand non-specific RNA-Seq library preparation TruSeq RNA Sample Prep v2 kit (Illumina).</DESIGN_DESCRIPTION>
      <SAMPLE_DESCRIPTOR accession="SRS9551005">
        <IDENTIFIERS>
          <PRIMARY_ID>SRS9551005</PRIMARY_ID>
          <SUBMITTER_ID namespace="pda|nickc3">TFC_T3_3</SUBMITTER_ID>
        </IDENTIFIERS>
      </SAMPLE_DESCRIPTOR>
      <LIBRARY_DESCRIPTOR>
        <LIBRARY_NAME>lib_TFC_T3_3</LIBRARY_NAME>
        <LIBRARY_STRATEGY>RNA-Seq</LIBRARY_STRATEGY>
        <LIBRARY_SOURCE>TRANSCRIPTOMIC</LIBRARY_SOURCE>
        <LIBRARY_SELECTION>PolyA</LIBRARY_SELECTION>
        <LIBRARY_LAYOUT>
          <SINGLE/>
        </LIBRARY_LAYOUT>
      </LIBRARY_DESCRIPTOR>
    </DESIGN>
    <PLATFORM>
      <ILLUMINA>
        <INSTRUMENT_MODEL>Illumina HiSeq 1500</INSTRUMENT_MODEL>
      </ILLUMINA>
    </PLATFORM>
  </EXPERIMENT>
</EXPERIMENT_SET>
