SRS10078986 SAMN21309860 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081427602/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.25 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078987 SAMN21309859 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081429026/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.72 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078988 SAMN21309858 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081430479/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078989 SAMN21309857 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081432749/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.02 lineage/clade name B.1.1.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078990 SAMN21309855 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081433983/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.6 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078991 SAMN21309856 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081432932/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078993 SAMN21309853 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081438473/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078995 SAMN21309851 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081440091/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.92 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078997 SAMN21309850 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081443141/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.23 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078999 SAMN21309847 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081450353/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.73 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079001 SAMN21309845 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081452666/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.01 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079003 SAMN21309844 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081453164/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.99 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079005 SAMN21309841 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081457696/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.49 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079007 SAMN21309840 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081459280/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.63 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079009 SAMN21309837 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081462015/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 32.2 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079011 SAMN21309835 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081464357/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.45 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079013 SAMN21309833 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081465120/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.15 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079015 SAMN21309830 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081467053/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079017 SAMN21309829 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081469492/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.77 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079019 SAMN21309827 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081470055/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.18 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079021 SAMN21309824 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081472725/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.57 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079023 SAMN21309823 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081475690/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079025 SAMN21309821 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081476884/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.49 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079027 SAMN21309818 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081480815/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.63 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079029 SAMN21309817 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081481061/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079030 SAMN21309813 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081484860/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079031 SAMN21309815 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081484313/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079033 SAMN21309814 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081484811/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079035 SAMN21309811 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081487359/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.98 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079037 SAMN21309809 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081491580/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.12 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079039 SAMN21309807 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081492669/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078992 SAMN21309854 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081437764/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078994 SAMN21309852 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081438966/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078996 SAMN21309849 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081445479/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.05 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10078998 SAMN21309848 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081448084/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079000 SAMN21309846 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081451053/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.5 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079002 SAMN21309843 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081453723/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.27 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079004 SAMN21309842 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081457391/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.73 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079006 SAMN21309839 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081459393/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.95 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079008 SAMN21309838 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081460179/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.77 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079010 SAMN21309834 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081464750/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.81 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079012 SAMN21309836 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081464339/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.48 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079014 SAMN21309832 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081466398/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.72 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079016 SAMN21309831 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081466410/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.52 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079018 SAMN21309828 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081469569/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079020 SAMN21309826 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081471537/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079022 SAMN21309825 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081472396/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 13.94 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079024 SAMN21309822 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081476454/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.88 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079026 SAMN21309820 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081477380/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079028 SAMN21309819 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081479657/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.47 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079032 SAMN21309816 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081483828/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079034 SAMN21309812 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081486837/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.98 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079036 SAMN21309810 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081487637/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.71 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079038 SAMN21309808 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081492661/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.97 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079040 SAMN21309806 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081493662/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079041 SAMN21309805 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081493880/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079042 SAMN21309804 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081496349/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.13 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079043 SAMN21309803 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081500572/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.42 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079044 SAMN21309802 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081500587/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.16 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079045 SAMN21309801 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081502331/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.16 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079046 SAMN21309800 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081504522/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079047 SAMN21309799 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081504916/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.39 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079048 SAMN21309798 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081509126/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.11 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079049 SAMN21309797 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081509245/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079050 SAMN21310056 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080820172/2021 collected_by UW Virology Lab collection_date 2021-08-08 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079051 SAMN21310055 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080833924/2021 collected_by UW Virology Lab collection_date 2021-08-08 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079052 SAMN21310054 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080838111/2021 collected_by UW Virology Lab collection_date 2021-08-08 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079053 SAMN21310053 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080838147/2021 collected_by UW Virology Lab collection_date 2021-08-08 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079054 SAMN21309796 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081512512/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.02 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079055 SAMN21309795 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081513507/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.42 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079056 SAMN21309794 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081516990/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079057 SAMN21309793 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081517131/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079058 SAMN21309792 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081521180/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race Black or African American collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 17.4127 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079059 SAMN21309790 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081524120/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.47 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079060 SAMN21309791 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081521516/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079061 SAMN21309789 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081529650/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079062 SAMN21309787 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081537733/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.76 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079063 SAMN21309788 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081529911/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079064 SAMN21309786 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081538446/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.06 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079065 SAMN21309785 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081538461/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 24.86 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079066 SAMN21309784 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081541526/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race Asian collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079067 SAMN21309783 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081542846/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.45 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079068 SAMN21309782 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081546652/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079069 SAMN21309781 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081547408/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079070 SAMN21309780 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081547690/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079071 SAMN21309778 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081548229/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 29.4695 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079072 SAMN21309779 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081547853/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079073 SAMN21309777 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081550375/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 1 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 19.6 lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079074 SAMN21309776 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081557404/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.3 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079075 SAMN21309775 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081558217/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.57 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079076 SAMN21309774 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081561087/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.05 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079077 SAMN21309772 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081562240/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.38 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079078 SAMN21309771 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081565957/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079079 SAMN21309773 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081561607/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.06 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079080 SAMN21309770 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081574910/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.92 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079081 SAMN21309769 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081577975/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.62 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079082 SAMN21309767 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081578634/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.59 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079083 SAMN21309768 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081578222/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.81 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079084 SAMN21309766 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081583781/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.29 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079085 SAMN21309765 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081583844/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nares geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 42 host_race Other Race collection_device Nares collection_method Nares purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 24 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079086 SAMN21310052 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080893500/2021 collected_by UW Virology Lab collection_date 2021-08-08 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079087 SAMN21310051 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080910780/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079088 SAMN21310050 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080910858/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079089 SAMN21310049 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080910923/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079090 SAMN21310048 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080911667/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079091 SAMN21310046 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080922130/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079092 SAMN21310047 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080921686/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079093 SAMN21310045 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080924936/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079094 SAMN21310044 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080925872/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079095 SAMN21310043 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080925912/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079096 SAMN21310041 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080929645/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079097 SAMN21310040 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080933976/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079098 SAMN21310042 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080928398/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079099 SAMN21310039 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080935796/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079100 SAMN21310038 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080936690/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079101 SAMN21310037 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080937031/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079102 SAMN21310036 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080938355/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079103 SAMN21310034 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080939065/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079104 SAMN21310033 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080943635/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079105 SAMN21310035 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080939031/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079106 SAMN21310031 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080944040/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 82 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079107 SAMN21310030 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080947711/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079108 SAMN21310029 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080948289/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079109 SAMN21310032 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080943971/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079110 SAMN21310028 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080948882/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079111 SAMN21310026 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080950714/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 65 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079112 SAMN21310027 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080950384/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079113 SAMN21310024 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080959676/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079114 SAMN21310025 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080951600/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079115 SAMN21310023 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080963162/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079116 SAMN21310022 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080964362/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079117 SAMN21310021 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080966044/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079118 SAMN21309764 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081583869/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079119 SAMN21309762 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081586722/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Asian collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Unknown diagnostic_pcr_Ct_value_1 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079120 SAMN21309763 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081585307/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079121 SAMN21309761 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081587075/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.18 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079122 SAMN21309760 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081591006/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.15 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079123 SAMN21309759 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081591190/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079124 SAMN21309758 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081593557/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079125 SAMN21309757 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081596031/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.36 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079126 SAMN21309756 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081596754/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 28.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079127 SAMN21309755 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081598436/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079128 SAMN21309754 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081599754/2021 collected_by UW Virology Lab collection_date 2021-08-15 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 21.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079129 SAMN21309753 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081600118/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.05 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079130 SAMN21309752 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081601079/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.5 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079131 SAMN21309751 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081601395/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.16 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079132 SAMN21309750 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081601816/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 21 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.55 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079133 SAMN21309749 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081602751/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.92 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079134 SAMN21309747 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081605614/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079135 SAMN21309748 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081604199/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.39 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079136 SAMN21309746 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081606692/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.89 lineage/clade name B.1.628 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079137 SAMN21309745 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081607089/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.38 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079138 SAMN21309744 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081608160/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079139 SAMN21309743 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081608221/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.34 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079140 SAMN21309742 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081609964/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079141 SAMN21309740 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081611778/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079142 SAMN21309741 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081611305/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079143 SAMN21309739 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081612958/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 27 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.74 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079144 SAMN21309738 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081613212/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.76 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079145 SAMN21309737 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081614424/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079146 SAMN21309736 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081614572/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079147 SAMN21309734 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081617382/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079148 SAMN21309735 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081616989/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 21 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.11 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079149 SAMN21309733 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081618051/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079150 SAMN21310020 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080967921/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 77 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079151 SAMN21310019 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080968429/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079152 SAMN21310018 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080969335/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079153 SAMN21310017 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080972146/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079154 SAMN21310016 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080972574/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079155 SAMN21310014 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080977210/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079156 SAMN21310015 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080973321/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079157 SAMN21310013 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080979568/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079158 SAMN21310012 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080983319/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079159 SAMN21310011 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080984522/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079160 SAMN21310010 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080989631/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079161 SAMN21310009 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080991598/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079162 SAMN21310008 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080992771/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Black or African American collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079163 SAMN21310006 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080999215/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079164 SAMN21310007 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080993978/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079165 SAMN21310005 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21080999436/2021 collected_by UW Virology Lab collection_date 2021-08-09 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079166 SAMN21310001 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081003367/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079167 SAMN21310003 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081002275/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079168 SAMN21310002 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081002904/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079169 SAMN21310004 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081001014/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079170 SAMN21310000 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081005118/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079171 SAMN21309999 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081005863/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079172 SAMN21309998 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081006049/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079173 SAMN21309996 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081008464/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079174 SAMN21309997 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081006688/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079175 SAMN21309995 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081012733/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079176 SAMN21309993 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081020650/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079177 SAMN21309994 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081018158/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079178 SAMN21309992 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081022102/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079179 SAMN21309991 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081023813/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079180 SAMN21309732 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081618066/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079181 SAMN21309990 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081028881/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079182 SAMN21309989 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081029670/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079183 SAMN21309731 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081618684/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 75 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079184 SAMN21309730 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081618896/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.48 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079185 SAMN21309729 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081620410/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079186 SAMN21309727 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081621780/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079187 SAMN21309728 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081620889/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.28 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079188 SAMN21309726 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081622094/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079189 SAMN21309725 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081623041/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 26 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079190 SAMN21309724 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081623338/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079191 SAMN21309723 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081623496/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.92 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079192 SAMN21309722 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081624500/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.16 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079193 SAMN21309721 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081626226/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 83 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079194 SAMN21309720 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081628193/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.45 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079195 SAMN21309719 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081628652/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079196 SAMN21309718 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081629752/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079197 SAMN21309717 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081630064/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079198 SAMN21309716 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081631442/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079199 SAMN21309715 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081631841/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079200 SAMN21309714 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081632240/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079201 SAMN21309713 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081632269/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.11 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079202 SAMN21309711 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081633078/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.83 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079203 SAMN21309712 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081632284/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.89 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079204 SAMN21309710 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081633785/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079205 SAMN21309708 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081634590/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079206 SAMN21309709 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081633883/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.28 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079207 SAMN21309706 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081636347/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.29 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079208 SAMN21309707 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081635282/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.94 lineage/clade name AY.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079209 SAMN21309705 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081637145/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.25 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079210 SAMN21309704 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081637595/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079211 SAMN21309703 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081637631/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.14 lineage/clade name B.1.628 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079212 SAMN21309701 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081638890/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079213 SAMN21309702 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081638594/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 68 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079214 SAMN21309985 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081038823/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079215 SAMN21309987 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081034567/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079216 SAMN21309988 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081031370/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079217 SAMN21309986 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081037826/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 71 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079218 SAMN21309984 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081040690/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079219 SAMN21309981 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081046368/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079220 SAMN21309983 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081041774/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079221 SAMN21309982 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081045742/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079222 SAMN21309980 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081047499/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079223 SAMN21309979 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081047907/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079224 SAMN21309978 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081048631/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079225 SAMN21309976 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081057308/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079226 SAMN21309977 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081051064/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079227 SAMN21309975 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081059768/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079228 SAMN21309973 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081068494/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079229 SAMN21309974 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081064442/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079230 SAMN21309972 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081069889/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079231 SAMN21309969 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081074661/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079232 SAMN21309970 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081071952/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079233 SAMN21309971 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081071169/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079234 SAMN21309968 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081074873/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079235 SAMN21309965 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081085320/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079236 SAMN21309967 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081079211/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079237 SAMN21309966 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081080429/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079238 SAMN21309964 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081085386/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079239 SAMN21309963 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081089464/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079240 SAMN21309962 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081095524/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079241 SAMN21309960 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081096351/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079242 SAMN21309961 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081095907/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079243 SAMN21309959 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081096915/2021 collected_by UW Virology Lab collection_date 2021-08-10 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079244 SAMN21309958 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081106740/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079245 SAMN21309700 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081639438/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.42 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079246 SAMN21309957 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081113235/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079247 SAMN21309699 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081640629/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079248 SAMN21309698 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081641170/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 54 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079249 SAMN21309696 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081642047/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.21 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079250 SAMN21309697 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081641186/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079251 SAMN21309695 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081642308/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 33 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.29 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079252 SAMN21309694 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081642737/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.5 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079253 SAMN21309693 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081643297/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079254 SAMN21309692 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081643678/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079255 SAMN21309691 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081644551/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079256 SAMN21309690 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081644658/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079257 SAMN21309689 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081644681/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 76 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.46 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079258 SAMN21309688 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081645710/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079259 SAMN21309687 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081645911/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079260 SAMN21309686 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081646202/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 31 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079261 SAMN21309685 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081647055/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 66 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.66 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079262 SAMN21309684 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081647644/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079263 SAMN21309683 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081647824/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 25 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079264 SAMN21309682 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081650801/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.11 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079265 SAMN21309681 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081653235/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 98 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079266 SAMN21309679 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081654424/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.05 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079267 SAMN21309676 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081655623/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079268 SAMN21309677 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081655185/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.81 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079269 SAMN21309675 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081656446/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079270 SAMN21309678 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081654895/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079271 SAMN21309680 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081653574/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.91 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079272 SAMN21309674 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081657990/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.65 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079273 SAMN21309672 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081658518/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.17 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079274 SAMN21309673 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081658273/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 22 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.15 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079275 SAMN21309671 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081661332/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079276 SAMN21309669 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081662676/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079277 SAMN21309670 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081662062/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079278 SAMN21309956 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081114686/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 0 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079279 SAMN21309955 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081115196/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079280 SAMN21309953 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081123278/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079281 SAMN21309954 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081121757/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079282 SAMN21309952 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081126324/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079283 SAMN21309949 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081142316/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079284 SAMN21309951 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081132927/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079285 SAMN21309950 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081138661/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079286 SAMN21309945 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081147240/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079287 SAMN21309946 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081146210/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079288 SAMN21309948 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081143826/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079289 SAMN21309947 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081144905/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079290 SAMN21309941 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081152268/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079291 SAMN21309944 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081147464/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079292 SAMN21309942 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081150377/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079293 SAMN21309943 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081148041/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079294 SAMN21309940 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081152501/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079295 SAMN21309938 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081155264/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079296 SAMN21309937 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081156153/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name P.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079297 SAMN21309936 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081158326/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079298 SAMN21309939 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081153633/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079299 SAMN21309935 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081161566/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079300 SAMN21309934 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081167431/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079301 SAMN21309933 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081168458/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079302 SAMN21309932 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081171845/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079303 SAMN21309931 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081174843/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079304 SAMN21309929 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081177597/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079305 SAMN21309930 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081175660/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079306 SAMN21309928 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081178046/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079307 SAMN21309927 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081179493/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079308 SAMN21309926 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081180578/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079309 SAMN21309925 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081183418/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079310 SAMN21309668 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081662729/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 22 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.13 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079311 SAMN21309666 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081664226/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079312 SAMN21309667 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081663333/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.9 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079313 SAMN21309665 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081664574/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.98 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079314 SAMN21309662 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081668240/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.66 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079315 SAMN21309661 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081669226/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079316 SAMN21309663 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081667814/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.66 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079317 SAMN21309664 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081667049/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.78 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079318 SAMN21309658 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081670117/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079319 SAMN21309659 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081670092/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.32 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079320 SAMN21309660 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081669992/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079321 SAMN21309657 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081671189/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 20 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.03 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079322 SAMN21309655 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081672914/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.71 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079323 SAMN21309654 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081673196/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079324 SAMN21309653 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081673684/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.03 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079325 SAMN21309656 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081671277/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079326 SAMN21309652 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081674013/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 28 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.74 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079327 SAMN21309649 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081675477/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 79 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079328 SAMN21309651 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081674457/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.75 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079329 SAMN21309650 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081674539/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079330 SAMN21309648 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081675987/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079331 SAMN21309647 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081677178/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079332 SAMN21309646 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081677523/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 29 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.74 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079333 SAMN21309645 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081677715/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079334 SAMN21309643 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081681820/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 37 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.75 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079335 SAMN21309644 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081679118/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 23 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079336 SAMN21309642 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081681952/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079337 SAMN21309641 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081683015/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.68 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079338 SAMN21309640 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081684035/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 55 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.18 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079339 SAMN21309639 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081686569/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079340 SAMN21309638 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081687172/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.19 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079341 SAMN21309924 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081191605/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079342 SAMN21309637 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081690045/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079343 SAMN21309923 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081198100/2021 collected_by UW Virology Lab collection_date 2021-08-11 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079344 SAMN21309919 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081303216/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079345 SAMN21309920 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081302659/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079346 SAMN21309918 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081305214/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.88 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079347 SAMN21309917 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081305708/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079348 SAMN21309916 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081312139/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079349 SAMN21309915 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081315338/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 32.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079350 SAMN21309913 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081320805/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079351 SAMN21309914 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081317105/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.31 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079352 SAMN21309912 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081324267/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079353 SAMN21309911 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081327691/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079354 SAMN21309910 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081330129/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.11 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079355 SAMN21309908 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081332974/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079356 SAMN21309909 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081330562/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 32.18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079357 SAMN21309922 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081336121/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079358 SAMN21309907 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081340954/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.59 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079359 SAMN21309906 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081344041/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.93 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079360 SAMN21309905 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081350990/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.84 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079361 SAMN21309903 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081355819/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 21.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079362 SAMN21309904 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081351860/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 26.78 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079363 SAMN21309902 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081358108/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079364 SAMN21309901 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081359552/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079365 SAMN21309899 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081366513/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079366 SAMN21309900 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081359809/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race Black or African American collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Lab Developed Test diagnostic_pcr_Ct_value_1 24.7959 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079367 SAMN21309898 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081367071/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079368 SAMN21309894 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081383246/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.09 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079369 SAMN21309895 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081383077/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 30.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079370 SAMN21309897 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081373628/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 17.33 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079371 SAMN21309896 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081379902/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.24 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079372 SAMN21309893 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081389304/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.42 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079373 SAMN21309921 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/OR-CDC-UW21081395459/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source Unknown geo_loc_name USA: Oregon host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race White collection_device Unknown collection_method Unknown purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 NPS diagnostic_pcr_Ct_value_1 NPS lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079374 SAMN21309635 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081690741/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 22 host_race Unknown collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079375 SAMN21309636 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081690126/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079376 SAMN21309634 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081690849/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.72 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079377 SAMN21309633 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081691881/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079378 SAMN21309631 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081692721/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.15 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079379 SAMN21309632 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081692436/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079380 SAMN21309630 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081694510/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079381 SAMN21309629 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081694689/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079382 SAMN21309628 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081694743/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079383 SAMN21309627 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081694854/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079384 SAMN21309626 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081696403/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.73 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079385 SAMN21309625 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081697358/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.16 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079386 SAMN21309623 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081700438/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.66 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079387 SAMN21309624 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081699081/2021 collected_by UW Virology Lab collection_date 2021-08-16 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.05 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079388 SAMN21309622 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081701133/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079389 SAMN21309621 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081703181/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.76 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079390 SAMN21309620 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081708441/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079391 SAMN21309619 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081708980/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079392 SAMN21309618 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081709542/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.96 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079393 SAMN21309616 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081714143/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079394 SAMN21309617 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081709810/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 73 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.02 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079395 SAMN21309615 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081715348/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079396 SAMN21309614 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081716027/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.15 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079397 SAMN21309613 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081716538/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079398 SAMN21309612 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081718146/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.44 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079399 SAMN21309611 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081718434/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.42 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079400 SAMN21309610 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081719445/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079401 SAMN21309609 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081719789/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079402 SAMN21309608 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081720415/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079403 SAMN21309607 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081721545/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079404 SAMN21309606 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081723660/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079405 SAMN21309605 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081725036/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.72 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079406 SAMN21309891 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081398084/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 29.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079407 SAMN21309892 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081397761/2021 collected_by UW Virology Lab collection_date 2021-08-13 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.97 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079408 SAMN21309890 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081400240/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079409 SAMN21309888 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081400779/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 25.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079410 SAMN21309889 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081400382/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.13 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079411 SAMN21309887 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081401809/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.49 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079412 SAMN21309886 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081404519/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 54 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.01 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079413 SAMN21309885 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081405526/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 23.19 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079414 SAMN21309883 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081407042/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079415 SAMN21309884 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081406416/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079416 SAMN21309882 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081407181/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 19.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079417 SAMN21309881 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081407944/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079418 SAMN21309879 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081408321/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079419 SAMN21309880 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081408200/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079420 SAMN21309878 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081410222/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.25 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079421 SAMN21309876 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081412691/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race White collection_device Nasal swab collection_method Nasal swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 27.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079422 SAMN21309877 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081410936/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079423 SAMN21309875 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081414413/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 16.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079424 SAMN21309874 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081414480/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079425 SAMN21309873 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081417570/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 60 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079426 SAMN21309872 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081417725/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.88 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079427 SAMN21309871 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081418089/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 73 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 18.95 lineage/clade name AY.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079428 SAMN21309870 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081418650/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 31.39 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079429 SAMN21309869 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081419137/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 11.9 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079430 SAMN21309867 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081420110/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079431 SAMN21309868 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081419399/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 22.23 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079432 SAMN21309866 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081420310/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 14.69 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079433 SAMN21309865 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081420914/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasopharyngeal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Panther Fusion diagnostic_pcr_Ct_value_1 24.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079434 SAMN21309864 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081421159/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 15.74 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079435 SAMN21309863 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081422555/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079436 SAMN21309862 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081423234/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079437 SAMN21309861 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081423522/2021 collected_by UW Virology Lab collection_date 2021-08-14 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Roche Cobas diagnostic_pcr_Ct_value_1 20.77 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079438 SAMN21309604 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081725450/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.03 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079439 SAMN21309603 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081726111/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 11.74 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079440 SAMN21309602 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081727232/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079441 SAMN21309600 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081733985/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 28.05 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079442 SAMN21309599 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081734283/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079443 SAMN21309598 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081734681/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 64 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079444 SAMN21309601 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081731845/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.92 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079445 SAMN21309596 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081737049/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079446 SAMN21309597 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081735472/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079447 SAMN21309595 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081737585/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.3 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079448 SAMN21309593 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081738148/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.39 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079449 SAMN21309594 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081737938/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.25 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079450 SAMN21309592 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081738254/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079451 SAMN21309591 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081738308/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079452 SAMN21309590 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081741584/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079453 SAMN21309589 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081741645/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.98 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079454 SAMN21309588 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081741843/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079455 SAMN21309587 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081745139/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079456 SAMN21309586 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081745511/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.71 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079457 SAMN21309585 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081747290/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.99 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079458 SAMN21309584 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081750058/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079459 SAMN21309583 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081751383/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.35 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079460 SAMN21309582 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081751552/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079461 SAMN21309581 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081751686/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079462 SAMN21309579 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081756723/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079463 SAMN21309578 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081757040/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.89 lineage/clade name Q.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079464 SAMN21309580 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081752773/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.59 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079465 SAMN21309577 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081757115/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.82 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079466 SAMN21309575 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081758065/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079467 SAMN21309576 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081757978/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079468 SAMN21309574 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081758351/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.09 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079469 SAMN21309573 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081759449/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079470 SAMN21309572 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081759653/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race American Indian or Alaska Native collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079471 SAMN21309571 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081759830/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079472 SAMN21309570 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081765187/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079473 SAMN21309569 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081765246/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.63 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079474 SAMN21309568 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081765337/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.76 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079475 SAMN21309567 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081765649/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.36 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079476 SAMN21309566 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081766454/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.03 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079477 SAMN21309565 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081766836/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 23.72 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079478 SAMN21309564 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081767252/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079479 SAMN21309563 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081768229/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079480 SAMN21309562 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081768743/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 6 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079481 SAMN21309560 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081769825/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.75 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079482 SAMN21309561 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081769370/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.72 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079483 SAMN21309559 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081770411/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race Native Hawaiian or Other Pacific Islander collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.12 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079484 SAMN21309558 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081770709/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079485 SAMN21309557 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081771958/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079486 SAMN21309556 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081772568/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.06 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079487 SAMN21309555 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081773011/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.8 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079488 SAMN21309554 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081773174/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079489 SAMN21309552 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081774393/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 71 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079490 SAMN21309553 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081773914/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079491 SAMN21309551 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081774944/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079492 SAMN21309550 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081775101/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 12.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079493 SAMN21309548 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081779890/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 78 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079494 SAMN21309546 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081781577/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079495 SAMN21309549 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081775432/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079496 SAMN21309547 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081780136/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079497 SAMN21309545 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081781925/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 1 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.24 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079498 SAMN21309544 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081783746/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 13.66 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079499 SAMN21309543 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081784540/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.9 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079500 SAMN21309540 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081785699/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 29.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079501 SAMN21309539 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081786990/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.45 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079502 SAMN21309542 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081785183/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.52 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079503 SAMN21309541 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081785250/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079504 SAMN21309538 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081787507/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 20.17 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079505 SAMN21309536 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081788942/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 27.43 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079506 SAMN21309537 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081788447/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079507 SAMN21309534 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081791648/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 26.21 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079508 SAMN21309535 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081791368/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079509 SAMN21309532 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081792500/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 24.4 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079510 SAMN21309533 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081792326/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079511 SAMN21309531 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081792685/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 15.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079512 SAMN21309530 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081796602/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079513 SAMN21309529 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081797440/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079514 SAMN21309528 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081797915/2021 collected_by UW Virology Lab collection_date 2021-08-17 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 19.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079515 SAMN21309527 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081810554/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 21.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079516 SAMN21309525 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081844547/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.24 lineage/clade name AY.11 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079517 SAMN21309526 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081833771/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 18 lineage/clade name B.1.621 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079518 SAMN21309524 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081861380/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079519 SAMN21309523 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081866232/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079520 SAMN21309522 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081868430/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 48 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 14.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079521 SAMN21309519 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081892237/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race Other Race collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 25.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079522 SAMN21309520 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081891937/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 22.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079523 SAMN21309521 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081883404/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race Asian collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.2 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079524 SAMN21309518 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081896017/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race Black or African American collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 16.15 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10079525 SAMN21309517 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 738869 PRJNA738869 Isolate SARS-CoV-2/Human/USA/WA-CDC-UW21081897930/2021 collected_by UW Virology Lab collection_date 2021-08-18 isolation_source nasal geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race White collection_device Nasal collection_method Nasal purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 ct diagnostic_pcr_protocol_1 Abbott Alinity diagnostic_pcr_Ct_value_1 17.95 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated