13

SRS10611856 SAMN22305956 13 433733 human lung metagenome Culture detection: Staphylococcus aureus 1E+5 CFU/mL - Aspergillus fumigatus + + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2815 collection_date 2016-11-02 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611857 SAMN22305958 15 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3891 collection_date 2016-11-02 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611858 SAMN22305957 14 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3890 collection_date 2016-11-01 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611859 SAMN22305960 17 433733 human lung metagenome Culture detection: Actinomyces + + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3893 collection_date 2016-11-04 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611860 SAMN22305961 18 433733 human lung metagenome Culture detection: Candida albicans + + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3894 collection_date 2016-11-05 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611861 SAMN22305959 16 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3892 collection_date 2016-11-04 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611862 SAMN22305962 19 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3895 collection_date 2016-11-07 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611863 SAMN22305963 20 433733 human lung metagenome Culture detection: Pseudomonas aeruginosa 1E+5 CFU/mL - Actinomyces 1E+4 CFU/mL - bacterial flora 1E+3 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3896 collection_date 2016-11-08 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611864 SAMN22305964 21 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3897 collection_date 2017-10-02 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611865 SAMN22305946 3 433733 human lung metagenome Culture detection: Pseudomonas aeruginosa > 1E+05 CFU/mL - Aspergillus fumigatus + + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2780 collection_date 2016-10-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611866 SAMN22305965 22 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3898 collection_date 2017-10-01 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611867 SAMN22305966 23 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3899 collection_date 2017-10-03 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611868 SAMN22305967 24 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3900 collection_date 2017-10-03 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611869 SAMN22305968 25 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3901 collection_date 2017-10-04 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611870 SAMN22305969 26 433733 human lung metagenome Culture detection: Pseudomonas aeruginosa presence + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3918 collection_date 2017-10-04 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611871 SAMN22305970 27 433733 human lung metagenome Culture detection: Enterobacter cloacae Cplx >1E+5 CFU/mL - Candida albicans 1E+3 CFU/mL - Candida tropicalis 1E+3 CFU/mL - bacterial flora > 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3919 collection_date 2017-10-07 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611872 SAMN22305971 28 433733 human lung metagenome Culture detection: Serratia marcescens 1E+2 CFU/mL - Candida albicans + - bacterial flora 1E+3 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3920 collection_date 2017-10-09 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611873 SAMN22305972 29 433733 human lung metagenome Culture detection: Enterobacter aerogenes 1E+3 CFU/mL - Staphylococcus aureus 1E+2 CFU/mL - bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3921 collection_date 2017-10-10 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611874 SAMN22305973 30 433733 human lung metagenome Culture detection: Enterococcus faecium 1E+2 CFU/mL - bacterial flora <1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3922 collection_date 2017-10-10 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611875 SAMN22305947 4 433733 human lung metagenome Culture detection: Moraxella catarrhalis > 1E+05 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2793 collection_date 2016-10-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611876 SAMN22305974 31 433733 human lung metagenome Culture detection: Haemophilus influenzae > 1E+5 CFU/mL - Aspergillus fumigatus presence - bacterial flora 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3923 collection_date 2017-10-11 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611877 SAMN22305975 32 433733 human lung metagenome Culture detection: Candida albicans 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3924 collection_date 2017-10-11 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611878 SAMN22305976 33 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3925 collection_date 2017-10-13 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611879 SAMN22305977 34 433733 human lung metagenome Culture detection: Serratia marcescens 1E+3 CFU/mL - bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3926 collection_date 2017-10-16 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611880 SAMN22305978 35 433733 human lung metagenome Culture detection: aerobic organisms presence - Pseudomonas aeruginosa 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3927 collection_date 2017-10-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611881 SAMN22305979 36 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3928 collection_date 2017-10-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611882 SAMN22305980 37 433733 human lung metagenome Culture detection: Actinomyces graevenitzii presence - bacterial flora <1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3929 collection_date 2017-10-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611883 SAMN22305981 38 433733 human lung metagenome Culture detection: Enterococcus faecalis 1E+4 CFU/mL - Staphylococcus epidermidis 1E+4 CFU/mL - Stenotrophomonas maltophilia 1E+3 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3930 collection_date 2017-11-08 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611884 SAMN22305982 39 433733 human lung metagenome Culture detection: Pseudomonas aeruginosa >1E+5 CFU/mL - bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3931 collection_date 2017-11-09 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611885 SAMN22305983 40 433733 human lung metagenome Culture detection: Pseudomonas aeruginosa 1E+2 CFU/mL - bacterial flora 1E+3 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-5185 collection_date 2017-11-09 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611886 SAMN22305948 5 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3855 collection_date 2016-10-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611887 SAMN22305984 T01 433733 human lung metagenome Culture detection: Staphylococcus aureus 1E+06 + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-1897 collection_date 2016-05-18 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611888 SAMN22305985 T02 433733 human lung metagenome Culture detection: bacterial flora 1E+6 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-1898 collection_date 2016-05-19 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611889 SAMN22305986 T03 433733 human lung metagenome Culture detection: Staphylococcus aureus (MSSA) 1E+03 CFU/mL - Streptococcus pneumoniae 1E+03 CFU/mL - bacterial flora 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-1899 collection_date 2016-06-02 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611890 SAMN22305987 T04 433733 human lung metagenome Culture detection: Citrobacter freundii 1E+02 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-1900 collection_date 2016-06-10 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611891 SAMN22305988 T05 433733 human lung metagenome Culture detection: Candida albicans + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2005 collection_date 2016-04-28 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611892 SAMN22305989 T06 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2006 collection_date 2016-05-24 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611893 SAMN22305990 T07 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2007 collection_date 2016-05-24 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611894 SAMN22305991 T08 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2188 collection_date 2016-04-28 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611895 SAMN22305992 T09 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2189 collection_date 2016-05-23 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611896 SAMN22305993 T10 433733 human lung metagenome Culture detection: Candida glabrata 1E+03 CFU/mL - Candida krusei 1E+03 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2190 collection_date 2016-05-23 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611897 SAMN22305949 6 433733 human lung metagenome Culture detection: Pseudomonas aeruginosa 1E+02 CFU/mL - Serratia marcescens 1E+02 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3856 collection_date 2016-10-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611898 SAMN22305994 T11 433733 human lung metagenome Culture detection: Capnocytophaga 1E+02 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2474 collection_date 2016-07-15 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611899 SAMN22305995 T12 433733 human lung metagenome Culture detection: Rothiamucilaginosa 1E+02 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2475 collection_date 2016-09-23 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611900 SAMN22305996 T13 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2531 collection_date 2016-05-31 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611901 SAMN22305997 T14 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2532 collection_date 2016-06-01 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611902 SAMN22305998 T15 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2533 collection_date 2016-06-04 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611903 SAMN22305999 T16 433733 human lung metagenome Culture detection: Klebsiella pneumoniae 1E+03 CFU/mL - Candida albicans + + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2534 collection_date 2016-08-02 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611904 SAMN22306000 T17 433733 human lung metagenome Culture detection: Staphylococcus aureus (MSSA) 1E+02 CFU/mL - bacterial flora Presence + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2535 collection_date 2016-09-13 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611905 SAMN22306001 T18 433733 human lung metagenome Culture detection: Escherichia coli > 1E+05 CFU/mL - Staphylococcus aureus (MSSA) > 1E+05CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2548 collection_date 2016-06-26 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611906 SAMN22306002 T19 433733 human lung metagenome Culture detection: Staphylococcus aureus (MSSA) 1E+05 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2549 collection_date 2016-06-26 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611907 SAMN22306003 T20 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2777 collection_date 2016-08-16 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611908 SAMN22305950 7 433733 human lung metagenome Culture detection: Serratia marcescens 1E+2 CFU/mL - bacterial flora 1E+3 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2794 collection_date 2016-10-26 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611909 SAMN22306004 T21 433733 human lung metagenome Culture detection: Citrobacter freundii 1E+02 CFU/mL - bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2778 collection_date 2016-09-14 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611910 SAMN22306005 T22 433733 human lung metagenome Culture detection: bacterial flora <1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2779 collection_date 2016-09-21 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611911 SAMN22306006 T23 433733 human lung metagenome Culture detection: aerobic organisms < 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2862 collection_date 2016-11-09 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611912 SAMN22306007 T24 433733 human lung metagenome Culture detection: bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2940 collection_date 2016-12-01 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611913 SAMN22306008 T25 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-2942 collection_date 2017-01-04 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611914 SAMN22306009 T26 433733 human lung metagenome Culture detection: Escherichia coli > 1E+5 CFU/mL - Proteus mirabilis > 1E+5 CFU/mL - Staphylococcus aureus > 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3149 collection_date 2016-11-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611915 SAMN22306011 T28 433733 human lung metagenome Culture detection: Haemophilus influenzae > 1E+5 CFU/mL - Staphylococcus aureus 1E+5 CFU/mL - Proteus vulgaris 1E+4 CFU/mL - bacterial flora 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3151 collection_date 2017-01-06 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611916 SAMN22306010 T27 433733 human lung metagenome Culture detection: Haemophilus influenzae > 1E+5 CFU/mL - Enterobacter cloacae 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3150 collection_date 2016-12-07 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611917 SAMN22306013 T30 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3161 collection_date 2016-12-20 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611918 SAMN22306012 T29 433733 human lung metagenome Culture detection: Pseudomonas aeruginosa > 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3152 collection_date 2017-01-10 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611919 SAMN22305951 8 433733 human lung metagenome Culture detection: Streptococcus betahemolyticus 1E+4 CFU/mL - bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3857 collection_date 2016-10-27 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611920 SAMN22306015 T32 433733 human lung metagenome Culture detection: bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3223 collection_date 2016-11-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611921 SAMN22306014 T31 433733 human lung metagenome Culture detection: Staphylococcus aureus 1E+5 CFU/mL - Streptococcus betahemolyticus B 1E+5 CFU/mL - Fusobacterium necrophorum 1E+5 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3162 collection_date 2017-01-13 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611922 SAMN22306016 T33 433733 human lung metagenome Culture detection: bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3224 collection_date 2016-11-18 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611923 SAMN22306017 T34 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3225 collection_date 2016-11-18 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611924 SAMN22306018 T35 433733 human lung metagenome Culture detection: Escherichia coli 1E+2 CFU/mL - S. maltophilia 1E+5 CFU/mL - Candida albicans 1E+4 CFU/mL - Candida glabrata 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3238 collection_date 2017-04-17 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611925 SAMN22306019 T36 433733 human lung metagenome Culture detection: bacterial flora <1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3239 collection_date 2017-04-18 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611926 SAMN22306020 T37 433733 human lung metagenome Culture detection: bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3399 collection_date 2017-04-23 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611927 SAMN22306021 T38 433733 human lung metagenome Culture detection: bacterial flora <1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3401 collection_date 2017-03-27 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611928 SAMN22306022 T39 433733 human lung metagenome Culture detection: Klebsiella pneumoniae > 1E+5 CFU/mL - Candida albicans 1E+4 CFU/mL - Saccharomyces cerevisiae 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3402 collection_date 2017-03-31 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611929 SAMN22306023 T40 433733 human lung metagenome Culture detection: bacterial flora 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3887 collection_date 2017-04-19 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611930 SAMN22305952 9 433733 human lung metagenome Culture detection: Streptococcus pneumoniae 1E+5 CFU/mL - bacterial flora 1E+3 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-2814 collection_date 2016-10-29 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611931 SAMN22306024 T41 433733 human lung metagenome Culture detection: bacterial flora <1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3888 collection_date 2017-04-09 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611932 SAMN22306025 T42 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3889 collection_date 2017-04-12 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611933 SAMN22306026 T43 433733 human lung metagenome Culture detection: Proteus mirabilis >1E+5 CFU/mL - Staphylococcus aureus 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3623 collection_date 2017-06-22 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611934 SAMN22306027 T44 433733 human lung metagenome Culture detection: Staphylococcus aureus 1E+4 CFU/mL - Candida albicans 1E+3 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3748 collection_date 2017-05-27 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611935 SAMN22306028 T45 433733 human lung metagenome Culture detection: Staphylococcus aureus 1E+4 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3749 collection_date 2017-06-16 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611936 SAMN22305953 10 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3858 collection_date 2016-11-01 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611937 SAMN22305944 1 433733 human lung metagenome Culture detection: Streptococcus pneumoniae > 1E+05 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3853 collection_date 2016-10-16 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611938 SAMN22305945 2 433733 human lung metagenome 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Mini-bronchoalveolar lavage BS-3854 collection_date 2016-10-15 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611939 SAMN22305954 11 433733 human lung metagenome Culture detection: Legionella pneumophila + + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3859 collection_date 2016-11-01 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental SRS10611940 SAMN22305955 12 433733 human lung metagenome Culture detection: bacterial flora 1E+2 CFU/mL + 1.7E+4 CFU/mL Bacillus subtilis (spiked) bioproject 771365 PRJNA771365 host Homo sapiens isolation_source Bronchoalveolar lavage BS-3860 collection_date 2016-11-02 geo_loc_name Switzerland: Geneva lat_lon 46.19 N 6.15 E BioSampleModel Metagenome or environmental