CDC Sars CoV2 Sequencing Baseline Constellation

SRS10581595 SAMN22312459 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145425/2021 collected_by Fulgent Genetics collection_date 2021-09-29 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581581 SAMN22312473 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145307/2021 collected_by Fulgent Genetics collection_date 2021-09-27 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 76 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581582 SAMN22312472 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145328/2021 collected_by Fulgent Genetics collection_date 2021-09-27 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581583 SAMN22312471 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145332/2021 collected_by Fulgent Genetics collection_date 2021-09-27 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 69 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581584 SAMN22312470 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145338/2021 collected_by Fulgent Genetics collection_date 2021-09-27 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581585 SAMN22312469 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145348/2021 collected_by Fulgent Genetics collection_date 2021-09-29 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581586 SAMN22312468 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145353/2021 collected_by Fulgent Genetics collection_date 2021-09-27 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581587 SAMN22312467 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145355/2021 collected_by Fulgent Genetics collection_date 2021-09-27 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581588 SAMN22312466 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145365/2021 collected_by Fulgent Genetics collection_date 2021-09-27 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581589 SAMN22312465 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145374/2021 collected_by Fulgent Genetics collection_date 2021-09-29 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581590 SAMN22312464 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145379/2021 collected_by Fulgent Genetics collection_date 2021-09-28 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581591 SAMN22312463 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145392/2021 collected_by Fulgent Genetics collection_date 2021-09-28 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581592 SAMN22312462 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145397/2021 collected_by Fulgent Genetics collection_date 2021-09-29 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581593 SAMN22312461 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145401/2021 collected_by Fulgent Genetics collection_date 2021-09-29 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10581594 SAMN22312460 CDC Sars CoV2 Sequencing Baseline Constellation 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/TX-CDC-FG-145411/2021 collected_by Fulgent Genetics collection_date 2021-09-29 isolation_source RNA geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race DTA collection_device RNA collection_method RNA purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC diagnostic_pcr_Ct_value_1 Unknown diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated