SRS10647177 SAMN22419172 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148606/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647168 SAMN22419181 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148595/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647158 SAMN22419191 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148581/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647157 SAMN22419192 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148580/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647156 SAMN22419193 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148579/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647155 SAMN22419194 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148578/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647154 SAMN22419195 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148577/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647153 SAMN22419196 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148574/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647178 SAMN22419171 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148607/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647176 SAMN22419173 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148605/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647175 SAMN22419174 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148604/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647174 SAMN22419175 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148602/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 61 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647173 SAMN22419176 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148600/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647172 SAMN22419177 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148599/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 17 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647171 SAMN22419178 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148598/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647170 SAMN22419179 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148597/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647169 SAMN22419180 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148596/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647179 SAMN22419170 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148608/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647167 SAMN22419182 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148594/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647166 SAMN22419183 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148593/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647165 SAMN22419184 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148592/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647164 SAMN22419185 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148591/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647163 SAMN22419186 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148589/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647162 SAMN22419187 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148588/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647161 SAMN22419188 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148587/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647160 SAMN22419189 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148585/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647159 SAMN22419190 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148584/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647180 SAMN22419169 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148609/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647181 SAMN22419168 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148610/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647182 SAMN22419167 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148611/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647183 SAMN22419166 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148613/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647184 SAMN22419165 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148614/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647186 SAMN22419041 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148749/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 66 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647187 SAMN22419040 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148750/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647188 SAMN22419039 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148751/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 77 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647189 SAMN22419038 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148752/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647190 SAMN22419037 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148753/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647191 SAMN22419036 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148754/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647192 SAMN22419035 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148755/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647193 SAMN22419034 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148756/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647194 SAMN22419033 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148757/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647195 SAMN22419032 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148758/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 78 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647196 SAMN22419031 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148759/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647197 SAMN22419030 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148760/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647185 SAMN22419042 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148748/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647198 SAMN22419029 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148761/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647199 SAMN22419028 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148762/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647200 SAMN22419027 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148763/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647201 SAMN22419026 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148764/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647202 SAMN22419025 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148765/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647203 SAMN22419024 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148766/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647204 SAMN22419023 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148767/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647205 SAMN22419022 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148768/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647206 SAMN22419021 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148769/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647207 SAMN22419020 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148770/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 77 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647208 SAMN22419019 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148771/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647209 SAMN22419018 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148772/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647210 SAMN22419017 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148773/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 2 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647211 SAMN22419016 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148774/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647212 SAMN22419015 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148775/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647213 SAMN22419014 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148776/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647214 SAMN22419013 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148777/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647215 SAMN22419011 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148779/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 77 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647216 SAMN22419012 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148778/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647217 SAMN22419392 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147893/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647218 SAMN22419390 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147895/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647219 SAMN22419391 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147894/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647220 SAMN22419389 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147897/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647221 SAMN22419164 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148615/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647222 SAMN22419163 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148616/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647223 SAMN22419162 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148617/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647224 SAMN22419161 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148618/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647225 SAMN22419160 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148619/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647226 SAMN22419159 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148620/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 8 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647227 SAMN22419158 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148621/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647228 SAMN22419156 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148623/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647229 SAMN22419157 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148622/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647230 SAMN22419155 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148624/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647231 SAMN22419154 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148625/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647232 SAMN22419153 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148626/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647233 SAMN22419152 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148627/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647234 SAMN22419151 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148628/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647235 SAMN22419150 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148629/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647236 SAMN22419149 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148630/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647237 SAMN22419148 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148631/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647238 SAMN22419147 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148632/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647239 SAMN22419146 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148633/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647240 SAMN22419145 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148635/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647241 SAMN22419144 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148636/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647242 SAMN22419143 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148637/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647243 SAMN22419142 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148638/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647244 SAMN22419141 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148639/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race WHI collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647245 SAMN22419140 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148640/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647246 SAMN22419139 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148641/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647247 SAMN22419138 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148642/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647248 SAMN22419136 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148644/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647249 SAMN22419137 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148643/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647250 SAMN22419135 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148645/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647251 SAMN22419134 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148646/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647252 SAMN22419133 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148647/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647253 SAMN22419010 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148780/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647254 SAMN22419009 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148781/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647255 SAMN22419008 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148782/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647256 SAMN22419007 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148783/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647257 SAMN22419006 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148784/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647258 SAMN22419005 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148785/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647259 SAMN22419004 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148786/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647260 SAMN22419003 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148787/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647261 SAMN22419002 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148788/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647262 SAMN22419001 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148789/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647263 SAMN22419000 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148790/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647264 SAMN22418999 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148791/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647265 SAMN22418998 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148792/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647266 SAMN22418996 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148794/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647267 SAMN22418997 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148793/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647268 SAMN22418994 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148796/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647269 SAMN22418995 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148795/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 59 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647270 SAMN22418993 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148797/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 63 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647271 SAMN22418992 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148798/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647272 SAMN22418991 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148799/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647273 SAMN22418990 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148800/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race UNK collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647274 SAMN22418989 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148801/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647275 SAMN22418987 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148803/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647276 SAMN22418988 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148802/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 48 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647278 SAMN22418985 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148805/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647279 SAMN22418984 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148806/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 2 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647280 SAMN22418983 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148807/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647281 SAMN22418982 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148808/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647282 SAMN22418981 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148809/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647283 SAMN22418980 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148810/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647284 SAMN22418979 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148811/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647285 SAMN22419388 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147898/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 39 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647277 SAMN22418986 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148804/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647286 SAMN22419387 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147899/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647287 SAMN22419386 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147901/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647288 SAMN22419385 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147902/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647289 SAMN22419384 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147904/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 7 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647290 SAMN22419383 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147905/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 24 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647291 SAMN22419382 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147906/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647292 SAMN22419381 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147907/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647293 SAMN22419380 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147908/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647294 SAMN22419379 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147909/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 23 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647295 SAMN22419378 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147910/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647296 SAMN22419377 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147912/2021 collected_by Fulgent Genetics collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 55 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647297 SAMN22419376 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147913/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647298 SAMN22419375 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147914/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 47 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647299 SAMN22419374 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147915/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647300 SAMN22419373 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147918/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 42 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647301 SAMN22419372 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147919/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age <1 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647302 SAMN22419370 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147922/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647303 SAMN22419371 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147920/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 36 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647304 SAMN22419369 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147924/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647305 SAMN22419368 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147925/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 18 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647306 SAMN22419366 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147927/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647307 SAMN22419367 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147926/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647308 SAMN22419365 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147928/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647309 SAMN22419364 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147931/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 55 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647310 SAMN22419363 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147932/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647311 SAMN22419362 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147933/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647312 SAMN22419361 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147934/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 46 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647313 SAMN22419360 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147937/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 1 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647314 SAMN22419359 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147938/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647315 SAMN22419358 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147942/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647316 SAMN22419357 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147943/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647317 SAMN22419356 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147946/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647318 SAMN22419355 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147960/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 69 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647319 SAMN22419354 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147962/2021 collected_by Fulgent Genetics collection_date 2021-10-08 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647320 SAMN22419353 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147963/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 57 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647321 SAMN22419352 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147966/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647322 SAMN22419351 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147969/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 75 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647323 SAMN22419350 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147972/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647324 SAMN22419349 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147974/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 87 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647325 SAMN22419348 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147975/2021 collected_by Fulgent Genetics collection_date 2021-10-08 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647326 SAMN22419347 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147980/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647327 SAMN22419346 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147982/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647328 SAMN22419345 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147987/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647329 SAMN22419344 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147990/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 58 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647330 SAMN22419342 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147994/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 68 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647331 SAMN22419343 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-147993/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647332 SAMN22419341 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148000/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647333 SAMN22419340 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148003/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647334 SAMN22419339 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148007/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647335 SAMN22419338 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148009/2021 collected_by Fulgent Genetics collection_date 2021-10-08 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647336 SAMN22419337 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148010/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 51 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647337 SAMN22419336 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148021/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 10 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647338 SAMN22419335 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148022/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 28 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647339 SAMN22419334 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148023/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647340 SAMN22419332 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148042/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647341 SAMN22419333 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148035/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647342 SAMN22419331 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148043/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647343 SAMN22419330 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148050/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647344 SAMN22419329 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148051/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 69 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647345 SAMN22419328 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148052/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 3 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647346 SAMN22419327 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148053/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 6 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647347 SAMN22419326 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148056/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 18 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647348 SAMN22419325 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148058/2021 collected_by Fulgent Genetics collection_date 2021-10-08 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647349 SAMN22419324 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148063/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647350 SAMN22419323 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148064/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 65 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647351 SAMN22419322 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148066/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647352 SAMN22419321 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148070/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 74 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647353 SAMN22419319 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148082/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647354 SAMN22419320 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148076/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647355 SAMN22419318 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148086/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647356 SAMN22419317 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148090/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647357 SAMN22419316 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148093/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 64 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647358 SAMN22419315 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148109/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647359 SAMN22419314 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148111/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 40 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647360 SAMN22419313 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148125/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 43 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647361 SAMN22419312 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148136/2021 collected_by Fulgent Genetics collection_date 2021-10-09 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647362 SAMN22419311 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148405/2021 collected_by Fulgent Genetics collection_date 2021-10-11 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647363 SAMN22419310 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148406/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source saliva geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race UNK collection_device Saliva collection_method Saliva purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647364 SAMN22419309 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148407/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race WHI collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.30 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647365 SAMN22419308 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148411/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 90+ host_race WHI collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647366 SAMN22419307 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148413/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647367 SAMN22419304 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148420/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647368 SAMN22419306 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148414/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647369 SAMN22419305 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148419/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647370 SAMN22419303 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148422/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647371 SAMN22419302 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148423/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647372 SAMN22419301 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148424/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647373 SAMN22419300 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148425/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 59 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647374 SAMN22419299 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148426/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647375 SAMN22419298 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148427/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647376 SAMN22419297 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148428/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647377 SAMN22419296 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148429/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 50 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647378 SAMN22419295 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148430/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647379 SAMN22419294 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148431/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 42 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647380 SAMN22419293 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148432/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647381 SAMN22419132 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148649/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647382 SAMN22419131 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148650/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647383 SAMN22419130 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148651/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647384 SAMN22419129 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148652/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647385 SAMN22419128 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148653/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647386 SAMN22419127 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148654/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 51 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647387 SAMN22419126 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148655/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647388 SAMN22419125 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148657/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647389 SAMN22419124 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148658/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 39 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647390 SAMN22419123 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148659/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 60 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647391 SAMN22419122 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148660/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 42 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647392 SAMN22419121 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148662/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647393 SAMN22419120 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148663/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 32 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647394 SAMN22419119 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148664/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647395 SAMN22419118 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148665/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.35 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647396 SAMN22419117 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148666/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647397 SAMN22419116 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148667/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647398 SAMN22419115 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148668/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647399 SAMN22419114 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148669/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647400 SAMN22419113 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148670/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 65 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647401 SAMN22419112 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148671/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647402 SAMN22419111 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148672/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647403 SAMN22419110 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148673/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647404 SAMN22419109 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148674/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647405 SAMN22419108 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148675/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 66 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647406 SAMN22419107 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148676/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647407 SAMN22419106 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148677/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647408 SAMN22419105 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148678/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 36 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647409 SAMN22419103 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148680/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647410 SAMN22419104 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148679/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 3 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647411 SAMN22419102 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148681/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647412 SAMN22419101 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148682/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647413 SAMN22418978 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148812/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647414 SAMN22418938 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148813/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647415 SAMN22418977 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148814/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647416 SAMN22418976 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148815/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647417 SAMN22418974 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148817/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647418 SAMN22418975 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148816/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647419 SAMN22418972 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148819/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 4 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647420 SAMN22418973 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148818/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647421 SAMN22418971 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148820/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647422 SAMN22418970 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148821/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 1 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647423 SAMN22418969 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148822/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647424 SAMN22418967 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148825/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647425 SAMN22418968 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148824/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647426 SAMN22418937 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148823/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 11.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647427 SAMN22418966 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148826/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.38 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647428 SAMN22418936 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148827/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 57 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647429 SAMN22418965 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148828/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647430 SAMN22418962 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148831/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647431 SAMN22418960 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148833/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647432 SAMN22418961 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148832/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647433 SAMN22418959 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148834/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647434 SAMN22418958 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148835/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647435 SAMN22418957 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148836/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647436 SAMN22418956 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148837/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647437 SAMN22418955 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148838/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 44 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647438 SAMN22418954 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148839/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647439 SAMN22418953 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148840/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647440 SAMN22418952 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148841/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647441 SAMN22418951 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148842/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647442 SAMN22419292 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148436/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 55 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647443 SAMN22418950 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148843/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647444 SAMN22419291 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148437/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647445 SAMN22419290 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148438/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 80 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647446 SAMN22419288 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148440/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 10 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647447 SAMN22419289 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148439/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 67 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647448 SAMN22419287 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148442/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 47 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647449 SAMN22419285 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148444/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647450 SAMN22419286 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148443/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 61 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647451 SAMN22419284 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148447/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 17 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647452 SAMN22419283 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148448/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647453 SAMN22419282 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148449/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647454 SAMN22419281 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148451/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 3 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647455 SAMN22419280 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148452/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647456 SAMN22419279 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148456/2021 collected_by Fulgent Genetics collection_date 2021-10-11 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 74 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647457 SAMN22419278 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148458/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647458 SAMN22419277 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148459/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 31 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647460 SAMN22419275 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148465/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 68 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647461 SAMN22419274 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148466/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647459 SAMN22419276 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148460/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647462 SAMN22419273 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148467/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 9 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647463 SAMN22419272 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148468/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 10 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647464 SAMN22419271 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148470/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647465 SAMN22419270 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148471/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647466 SAMN22419269 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148474/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 46 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647467 SAMN22419268 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148476/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647468 SAMN22419267 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148477/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 38 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647469 SAMN22419266 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148478/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647470 SAMN22419265 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148479/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647471 SAMN22419264 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148480/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647472 SAMN22419263 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148481/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 7 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647473 SAMN22419262 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148482/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647474 SAMN22419261 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148483/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647475 SAMN22419260 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148484/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647476 SAMN22419259 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148485/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647477 SAMN22419258 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148486/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647478 SAMN22419257 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148487/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 29 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647479 SAMN22419256 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148488/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647480 SAMN22419255 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148489/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647481 SAMN22419254 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148490/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647482 SAMN22419252 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148492/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647483 SAMN22419253 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148491/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 53 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647484 SAMN22419251 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148493/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647485 SAMN22419250 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148494/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 9 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647486 SAMN22419249 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148497/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647487 SAMN22419247 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148499/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647488 SAMN22419248 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148498/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 6 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647489 SAMN22419246 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148502/2021 collected_by Fulgent Genetics collection_date 2021-10-11 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647490 SAMN22419245 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148503/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 62 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647491 SAMN22419244 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148504/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647492 SAMN22419242 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148506/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647493 SAMN22419243 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148505/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647494 SAMN22419241 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148507/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 32 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647495 SAMN22419240 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148508/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 52 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647496 SAMN22419239 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148509/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647497 SAMN22419237 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148512/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 50 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647498 SAMN22419238 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148510/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647499 SAMN22419236 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148514/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647500 SAMN22419235 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148515/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 24 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647501 SAMN22419234 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148517/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647502 SAMN22419232 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148520/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647503 SAMN22419233 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148519/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647504 SAMN22419231 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148521/2021 collected_by Fulgent Genetics collection_date 2021-10-11 isolation_source nasopharyngeal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race Unknown collection_device Nasopharyngeal Swab collection_method Nasopharyngeal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647505 SAMN22419230 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148522/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 40 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647506 SAMN22419229 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148523/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 41 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647507 SAMN22418949 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148844/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647508 SAMN22418948 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148845/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647509 SAMN22418947 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148846/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647510 SAMN22418946 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148847/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647511 SAMN22418944 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148683/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 70 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647512 SAMN22418945 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148848/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647513 SAMN22419100 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148684/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 47 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 12.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647514 SAMN22419099 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148685/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647515 SAMN22419098 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148686/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647516 SAMN22419097 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148687/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 63 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647517 SAMN22419096 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148688/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647518 SAMN22418943 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148690/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647519 SAMN22419095 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148689/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647520 SAMN22419094 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148691/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647521 SAMN22419093 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148692/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 55 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647522 SAMN22419092 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148693/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647523 SAMN22419091 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148694/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647524 SAMN22419090 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148695/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age <1 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647525 SAMN22419088 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148697/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647526 SAMN22419089 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148696/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 40 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 14.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647527 SAMN22419087 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148698/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647528 SAMN22419086 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148699/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647529 SAMN22419085 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148700/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647530 SAMN22419084 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148702/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647531 SAMN22418942 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148701/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647532 SAMN22419083 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148703/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 46 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647533 SAMN22419082 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148704/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 62 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647534 SAMN22419081 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148705/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647535 SAMN22418941 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148706/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647536 SAMN22419080 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148707/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647537 SAMN22419079 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148708/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 25 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647538 SAMN22419078 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148709/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 37 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647539 SAMN22419077 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148710/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 49 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647540 SAMN22419076 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148711/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647541 SAMN22418940 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148712/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647542 SAMN22419073 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148715/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647543 SAMN22419074 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148714/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647544 SAMN22419075 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148713/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647545 SAMN22419072 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148716/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647546 SAMN22419071 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148717/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647547 SAMN22419070 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148718/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 11 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647548 SAMN22419069 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148719/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647549 SAMN22419068 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148720/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 19 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 25.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647550 SAMN22419067 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148722/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 49 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647551 SAMN22418939 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/NV-CDC-FG-148721/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: Nevada host Homo sapiens host_disease COVID-19 host_sex female host_age 20 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647552 SAMN22419066 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148723/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647553 SAMN22419065 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148724/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647554 SAMN22419063 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148726/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647555 SAMN22419064 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148725/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 45 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647556 SAMN22419062 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148727/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647557 SAMN22419061 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148728/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 28 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647558 SAMN22419060 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148729/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 3 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647559 SAMN22419059 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148731/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 16 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647560 SAMN22419057 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148733/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 32 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647561 SAMN22419058 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148732/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 13.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647562 SAMN22419056 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148734/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647563 SAMN22419054 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148736/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647564 SAMN22419055 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148735/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 59 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647565 SAMN22419053 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148737/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 29 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647566 SAMN22419051 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148739/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 31 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647567 SAMN22419050 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148740/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 21 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647568 SAMN22419052 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148738/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 56 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647569 SAMN22419049 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148741/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 4 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647570 SAMN22419048 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148742/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 34 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647571 SAMN22419047 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148743/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 36 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 17.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647572 SAMN22419046 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148744/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 74 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647573 SAMN22419045 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148745/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 44 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647574 SAMN22419044 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148746/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647575 SAMN22419043 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148747/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 20.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647576 SAMN22419228 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148524/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 13 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647577 SAMN22419227 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148525/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 34 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647578 SAMN22419225 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148528/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 8 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647579 SAMN22419224 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148529/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647580 SAMN22419226 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148527/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647581 SAMN22419223 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148530/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 72 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647582 SAMN22419222 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148535/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 42 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647583 SAMN22419221 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148539/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 47 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 23.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647584 SAMN22419220 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148541/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 75 host_race DTA_OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647585 SAMN22419218 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148544/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 50 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647586 SAMN22419219 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148543/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 22 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647587 SAMN22419217 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148545/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 30 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647588 SAMN22419216 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148546/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 56 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647589 SAMN22419215 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148547/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 28 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647590 SAMN22419214 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148548/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 67 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647591 SAMN22419213 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148549/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647592 SAMN22419212 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148550/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 28.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647593 SAMN22419211 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148551/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 26 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 19.4 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647594 SAMN22419210 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148552/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 43 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.9 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647595 SAMN22419209 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148553/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 12 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647596 SAMN22419208 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148555/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 58 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647597 SAMN22419207 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148558/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 27 host_race OTH collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 29.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647598 SAMN22419205 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148562/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 5 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647599 SAMN22419206 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148559/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 35 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.6 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647600 SAMN22419203 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148564/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 38 host_race DTA collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 27.0 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647601 SAMN22419204 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148563/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.5 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647602 SAMN22419202 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148566/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 22.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647603 SAMN22419200 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148569/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 33 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.7 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647604 SAMN22419199 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148570/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 25 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 18.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647605 SAMN22419201 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148567/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 15 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 24.2 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647606 SAMN22419198 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148571/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 14 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 21.3 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647607 SAMN22419197 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148572/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 21 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 26.8 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647667 SAMN22418964 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148829/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex female host_age 52 host_race NAM collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 15.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10647668 SAMN22418963 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731152 PRJNA731152 Isolate SARS-CoV-2/Human/USA/CA-CDC-FG-148830/2021 collected_by Fulgent Genetics collection_date 2021-10-12 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex male host_age 23 host_race AMR collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 SC2 diagnostic_pcr_protocol_1 CDC Flu SC2 diagnostic_pcr_Ct_value_1 16.1 diagnostic_gene_name_2 N1 diagnostic_pcr_protocol_2 CDC Flu SC2 diagnostic_pcr_Ct_value_2 Unknown diagnostic_gene_name_3 N2 diagnostic_pcr_protocol_3 CDC Flu SC2 diagnostic_pcr_Ct_value_3 Unknown lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated