SRX12699365 QDX29455564 <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649314"> <IDENTIFIERS> <PRIMARY_ID>SRS10649314</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-QDX29455564/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699366" alias="QDX29455571"> 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<SAMPLE_DESCRIPTOR accession="SRS10649321"> <IDENTIFIERS> <PRIMARY_ID>SRS10649321</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TN-CDC-QDX29455599/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699372" alias="QDX29455606"> <IDENTIFIERS> <PRIMARY_ID>SRX12699372</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29455606</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID 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<LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699432" alias="QDX29519876"> <IDENTIFIERS> <PRIMARY_ID>SRX12699432</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519876</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649380"> <IDENTIFIERS> <PRIMARY_ID>SRS10649380</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519876/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699433" alias="QDX29519877"> <IDENTIFIERS> <PRIMARY_ID>SRX12699433</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519877</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649382"> <IDENTIFIERS> <PRIMARY_ID>SRS10649382</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519877/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699434" alias="QDX29519878"> <IDENTIFIERS> <PRIMARY_ID>SRX12699434</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519878</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649383"> <IDENTIFIERS> <PRIMARY_ID>SRS10649383</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519878/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699435" alias="QDX29519880"> <IDENTIFIERS> <PRIMARY_ID>SRX12699435</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519880</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649384"> <IDENTIFIERS> <PRIMARY_ID>SRS10649384</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519880/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699436" alias="QDX29519882"> <IDENTIFIERS> <PRIMARY_ID>SRX12699436</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519882</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649385"> <IDENTIFIERS> <PRIMARY_ID>SRS10649385</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519882/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699437" alias="QDX29519883"> <IDENTIFIERS> <PRIMARY_ID>SRX12699437</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519883</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649386"> <IDENTIFIERS> <PRIMARY_ID>SRS10649386</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519883/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699438" alias="QDX29519884"> <IDENTIFIERS> <PRIMARY_ID>SRX12699438</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519884</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649387"> <IDENTIFIERS> <PRIMARY_ID>SRS10649387</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519884/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699439" alias="QDX29519885"> <IDENTIFIERS> <PRIMARY_ID>SRX12699439</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519885</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649388"> <IDENTIFIERS> <PRIMARY_ID>SRS10649388</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519885/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699440" alias="QDX29519887"> <IDENTIFIERS> <PRIMARY_ID>SRX12699440</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519887</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649389"> <IDENTIFIERS> <PRIMARY_ID>SRS10649389</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TX-CDC-QDX29519887/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> 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<LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699442" alias="QDX29519889"> <IDENTIFIERS> <PRIMARY_ID>SRX12699442</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519889</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649391"> <IDENTIFIERS> <PRIMARY_ID>SRS10649391</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/LA-CDC-QDX29519889/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699443" alias="QDX29519890"> <IDENTIFIERS> <PRIMARY_ID>SRX12699443</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519890</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> 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namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649393"> <IDENTIFIERS> <PRIMARY_ID>SRS10649393</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/LA-CDC-QDX29519891/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699445" alias="QDX29519893"> <IDENTIFIERS> <PRIMARY_ID>SRX12699445</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519893</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649394"> <IDENTIFIERS> <PRIMARY_ID>SRS10649394</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MO-CDC-QDX29519893/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699446" alias="QDX29519894"> <IDENTIFIERS> 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649403"> <IDENTIFIERS> <PRIMARY_ID>SRS10649403</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/MO-CDC-QDX29519905/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699455" alias="QDX29519906"> <IDENTIFIERS> 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649448"> <IDENTIFIERS> <PRIMARY_ID>SRS10649448</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/CA-CDC-QDX29557002/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699500" alias="QDX29557004"> <IDENTIFIERS> 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<SAMPLE_DESCRIPTOR accession="SRS10649482"> <IDENTIFIERS> <PRIMARY_ID>SRS10649482</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/OR-CDC-QDX29519953/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699534" alias="QDX29519954"> <IDENTIFIERS> <PRIMARY_ID>SRX12699534</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519954</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649484"> <IDENTIFIERS> <PRIMARY_ID>SRS10649484</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/AK-CDC-QDX29519955/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699536" alias="QDX29519959"> <IDENTIFIERS> <PRIMARY_ID>SRX12699536</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519959</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649485"> <IDENTIFIERS> <PRIMARY_ID>SRS10649485</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/WA-CDC-QDX29519959/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649807"> <IDENTIFIERS> <PRIMARY_ID>SRS10649807</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IN-CDC-QDX29456312/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699860" alias="QDX29456316"> <IDENTIFIERS> 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<PRIMARY_ID>SRX12699869</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519665</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649817"> <IDENTIFIERS> <PRIMARY_ID>SRS10649817</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-QDX29519665/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699870" alias="QDX29519666"> <IDENTIFIERS> <PRIMARY_ID>SRX12699870</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519666</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649819"> <IDENTIFIERS> <PRIMARY_ID>SRS10649819</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/SC-CDC-QDX29519666/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> 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</ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699879" alias="QDX29519679"> <IDENTIFIERS> <PRIMARY_ID>SRX12699879</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519679</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649829"> <IDENTIFIERS> <PRIMARY_ID>SRS10649829</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TN-CDC-QDX29519679/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649870"> <IDENTIFIERS> <PRIMARY_ID>SRS10649870</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NC-CDC-QDX29519693/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699923" alias="QDX29519694"> <IDENTIFIERS> 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<SAMPLE_DESCRIPTOR accession="SRS10649887"> <IDENTIFIERS> <PRIMARY_ID>SRS10649887</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/TN-CDC-QDX29519726/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699939" alias="QDX29519727"> <IDENTIFIERS> <PRIMARY_ID>SRX12699939</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">QDX29519727</EXTERNAL_ID> </IDENTIFIERS> <TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10649889"> <IDENTIFIERS> <PRIMARY_ID>SRS10649889</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/GA-CDC-QDX29519728/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12699941" alias="QDX29519729"> <IDENTIFIERS> 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10650014"> <IDENTIFIERS> <PRIMARY_ID>SRS10650014</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/NJ-CDC-QDX29519811/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12700067" alias="QDX29519812"> <IDENTIFIERS> 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<TITLE/> <STUDY_REF accession="SRP314645"> <IDENTIFIERS> <PRIMARY_ID>SRP314645</PRIMARY_ID> <EXTERNAL_ID namespace="BioProject">PRJNA716985</EXTERNAL_ID> </IDENTIFIERS> </STUDY_REF> <DESIGN> <DESIGN_DESCRIPTION/> <SAMPLE_DESCRIPTOR accession="SRS10650034"> <IDENTIFIERS> <PRIMARY_ID>SRS10650034</PRIMARY_ID> <EXTERNAL_ID namespace="CDC-OAMD">SARS-CoV-2/Human/USA/IN-CDC-QDX29520276/2021</EXTERNAL_ID> </IDENTIFIERS> </SAMPLE_DESCRIPTOR> <LIBRARY_DESCRIPTOR> <LIBRARY_NAME>Unknown</LIBRARY_NAME> <LIBRARY_STRATEGY>AMPLICON</LIBRARY_STRATEGY> <LIBRARY_SOURCE>VIRAL RNA</LIBRARY_SOURCE> <LIBRARY_SELECTION>RT-PCR</LIBRARY_SELECTION> <LIBRARY_LAYOUT> <PAIRED/> </LIBRARY_LAYOUT> <LIBRARY_CONSTRUCTION_PROTOCOL>LDT, ARTIC v3 primer on Novaseq</LIBRARY_CONSTRUCTION_PROTOCOL> </LIBRARY_DESCRIPTOR> </DESIGN> <PLATFORM> <ILLUMINA> <INSTRUMENT_MODEL>Illumina NovaSeq 6000</INSTRUMENT_MODEL> </ILLUMINA> </PLATFORM> </EXPERIMENT> <EXPERIMENT accession="SRX12700085" alias="QDX29520277"> <IDENTIFIERS> 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