SRS10661684 SAMN22447777 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX691252430595/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.92 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661685 SAMN22447776 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX692630886599/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.5 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661686 SAMN22447775 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX692820614698/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.28 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661687 SAMN22447774 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX693889504128/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.54 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661688 SAMN22447773 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX695155445255/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.88 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661689 SAMN22447772 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX695349344183/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.46 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661690 SAMN22447771 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX696943136448/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.95 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661691 SAMN22447770 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX696979711042/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661692 SAMN22447769 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX697235488140/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.72 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661693 SAMN22447768 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX697679900112/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.65 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661694 SAMN22447767 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX697833467282/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661695 SAMN22447766 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX699394183478/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661696 SAMN22447765 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX700074960876/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.95 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661697 SAMN22447764 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX700375073475/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.73 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661698 SAMN22447763 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX701713498519/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661699 SAMN22447762 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX704814483796/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661700 SAMN22447761 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX705704968901/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.77 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661701 SAMN22447357 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX707723045873/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.86 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661702 SAMN22447760 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX709172851015/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.3 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661703 SAMN22447759 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX709289523465/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.41 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661704 SAMN22447758 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX709734287028/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.62 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661705 SAMN22447757 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX710372816036/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661706 SAMN22447756 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX711065026982/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.11 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661707 SAMN22447548 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX888469716554/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.92 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661708 SAMN22447547 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX888931563178/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.2 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661709 SAMN22447546 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX889861226261/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.15 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661710 SAMN22447545 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX891455254737/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661711 SAMN22447544 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX893620492839/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.7 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661712 SAMN22447543 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX893744905980/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.46 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661713 SAMN22447542 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX894855963556/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.45 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661714 SAMN22447541 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX894909973893/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.82 lineage/clade name AY.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661715 SAMN22447539 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX898854548035/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.85 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661716 SAMN22447540 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX896947763147/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.92 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661717 SAMN22447538 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX899377144204/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661718 SAMN22447537 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX899721230728/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661719 SAMN22447536 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX900250510062/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.86 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661720 SAMN22447535 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX900893878520/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661721 SAMN22447534 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX901537808184/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.59 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661722 SAMN22447533 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX901653483154/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.47 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661723 SAMN22447401 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NJ-CDC-IBX901994782182/2021 collected_by Infinity Biologix collection_date 2021-10-10 isolation_source nasal swab geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.05 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661724 SAMN22447532 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX902378699794/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661725 SAMN22447531 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX902957730941/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.47 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661726 SAMN22447530 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX904585467536/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.61 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661727 SAMN22447529 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX905351044938/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.97 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661728 SAMN22447528 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX907041016213/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.7 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661729 SAMN22447527 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX907059562132/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661730 SAMN22447526 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX907998416461/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.29 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661731 SAMN22447525 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX908245269226/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.27 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661732 SAMN22447524 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX908312094270/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.3 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661733 SAMN22447523 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX909207738582/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.21 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661734 SAMN22447522 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX909313323429/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661735 SAMN22447521 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX910408123209/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.71 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661736 SAMN22447520 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX911709548455/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.78 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661737 SAMN22447519 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX913586262634/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.79 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661738 SAMN22447518 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX914801601145/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661739 SAMN22447755 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX711767048978/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.75 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661740 SAMN22447754 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX712377836653/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661741 SAMN22447753 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX712387057780/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.94 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661742 SAMN22447752 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX712543127661/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.03 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661743 SAMN22447751 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX712776709699/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.59 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661744 SAMN22447750 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX714779450004/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.6 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661745 SAMN22447749 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX717633606437/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.28 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661746 SAMN22447748 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX720211094303/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.58 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661747 SAMN22447747 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX722632016320/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661748 SAMN22447746 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX722875216742/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.54 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661749 SAMN22447356 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX724155116830/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.42 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661750 SAMN22447745 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX724477643533/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.68 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661751 SAMN22447744 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX724758427377/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.3 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661752 SAMN22447743 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX727096393584/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661753 SAMN22447742 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX727734656895/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661754 SAMN22447741 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX729622873089/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661755 SAMN22447740 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX730037567575/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.36 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661756 SAMN22447739 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX730630924702/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.63 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661757 SAMN22447738 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX730975185005/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.18 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661758 SAMN22447737 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX731116713128/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.58 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661759 SAMN22447736 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX732496737638/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.76 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661760 SAMN22447735 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX732931834455/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.3 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661761 SAMN22447734 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX732993043998/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.83 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661762 SAMN22447403 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NJ-CDC-IBX733798673868/2021 collected_by Infinity Biologix collection_date 2021-10-10 isolation_source nasal swab geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.87 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661763 SAMN22447733 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX735049580435/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661764 SAMN22447732 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX735268557399/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.06 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661765 SAMN22447731 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX735401403706/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.44 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661766 SAMN22447730 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX735433029734/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.27 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661767 SAMN22447729 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX735848774552/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.73 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661768 SAMN22447728 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX736124257669/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.57 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661769 SAMN22447727 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX737499929669/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661770 SAMN22447726 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX738245810529/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661771 SAMN22448377 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX207895286158/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.06 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661772 SAMN22448376 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX209421972824/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.56 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661773 SAMN22448375 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX210460752022/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.5 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661774 SAMN22448374 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX210742287531/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.15 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661775 SAMN22448373 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX210897900406/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.74 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661776 SAMN22448372 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX211167771290/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.51 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661777 SAMN22448371 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX211572676760/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.19 lineage/clade name AY.29 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661778 SAMN22447395 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX212488735536/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661779 SAMN22448370 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX212866391618/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.45 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661780 SAMN22448369 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX213011392431/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.96 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661781 SAMN22448368 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX213335102238/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661782 SAMN22448367 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX214798440394/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661783 SAMN22448366 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX216070781267/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.38 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661784 SAMN22448365 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX216444555015/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.94 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661785 SAMN22448363 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX217085216619/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.69 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661786 SAMN22448364 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX216886704254/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.45 lineage/clade name B.1.36.17 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661787 SAMN22448362 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX219221132776/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661788 SAMN22448361 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX220396048329/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.59 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661789 SAMN22447351 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WA-CDC-IBX220606778834/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Washington host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.65 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661790 SAMN22448360 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX221562308857/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.59 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661791 SAMN22448359 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX222025248337/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.3 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661792 SAMN22448358 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX222166653954/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.49 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661793 SAMN22448333 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX222732847948/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661794 SAMN22448332 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX226232236806/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661795 SAMN22448331 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX227211573846/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661796 SAMN22448330 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX227258635847/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.45 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661797 SAMN22448329 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX227965641095/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 10.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661798 SAMN22448328 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX228583349531/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661799 SAMN22448327 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX229721062714/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.05 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661800 SAMN22448326 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX230382454860/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661801 SAMN22448325 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX230820315590/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661802 SAMN22448324 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX230887644664/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.55 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661803 SAMN22447901 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX584749609842/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661804 SAMN22447900 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX584808173993/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.95 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661805 SAMN22447386 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX585087313176/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.47 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661806 SAMN22447899 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX585968405095/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661807 SAMN22447898 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX586059664952/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.01 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661808 SAMN22447897 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX587385322179/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.88 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661809 SAMN22447896 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX587937241252/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661810 SAMN22447895 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX589511458666/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661811 SAMN22447894 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX590238245805/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.44 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661812 SAMN22447893 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX590244218259/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661813 SAMN22447892 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX590329520886/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.32 lineage/clade name AY.29 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661814 SAMN22447891 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX592284915612/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.94 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661815 SAMN22447890 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX592729640901/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.73 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661816 SAMN22447889 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX594709111117/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.52 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661817 SAMN22447888 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX594905539864/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.36 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661818 SAMN22447887 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX594911297290/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.5 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661819 SAMN22447385 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX595812047155/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661820 SAMN22447886 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX596234862556/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.45 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661821 SAMN22447885 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX596305182196/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.54 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661822 SAMN22447883 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX598291477444/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.49 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661823 SAMN22447884 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX596553647223/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.79 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661824 SAMN22447355 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/SD-CDC-IBX598633205688/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: South Dakota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.68 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661825 SAMN22447882 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX602230580799/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661826 SAMN22447881 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX602295037940/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.73 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661827 SAMN22447878 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX603088607044/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.13 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661828 SAMN22447879 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX603054988570/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.69 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661829 SAMN22447880 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX602660546357/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.75 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661830 SAMN22447877 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX604091430283/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.36 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661831 SAMN22447875 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX605756666714/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661832 SAMN22447876 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX605511315953/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661833 SAMN22447874 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX606192798539/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.1 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661834 SAMN22447384 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX610579601385/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661835 SAMN22448620 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX004756556815/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.84 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661836 SAMN22448619 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX005961835100/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.11 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661837 SAMN22448618 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX008275824592/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.92 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661838 SAMN22448617 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX008505643980/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.48 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661840 SAMN22448615 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX010579710997/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.78 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661841 SAMN22448614 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX011360982969/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661842 SAMN22448613 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX013278036834/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661843 SAMN22448611 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX013839193712/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.88 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661844 SAMN22448612 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX013826645582/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661845 SAMN22448610 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX014657537459/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.55 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661846 SAMN22448608 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX014929116165/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.62 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661847 SAMN22448609 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX014692255065/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661848 SAMN22448607 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX015608246279/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.3 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661849 SAMN22448605 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX016382763373/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.38 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661850 SAMN22448606 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX016237611321/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661851 SAMN22448604 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX017187391839/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661854 SAMN22448601 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX019283278830/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.82 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661864 SAMN22448592 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX029087604508/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661866 SAMN22447933 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX559733901118/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.73 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661868 SAMN22448590 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX030095827198/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.12 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661870 SAMN22447930 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX562425050647/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661872 SAMN22447928 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX562795782430/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661874 SAMN22447926 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX564042205042/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.49 lineage/clade name B.1.1.294 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661876 SAMN22447924 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX567272382713/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.11 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661878 SAMN22447922 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX571841052156/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.83 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661880 SAMN22447920 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX571965077026/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661882 SAMN22447918 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX573381424379/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.91 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661884 SAMN22447915 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX574594921448/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.52 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661886 SAMN22447914 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX575846220366/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.53 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661839 SAMN22448616 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX009635761957/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661852 SAMN22448602 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX018451111174/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.66 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661853 SAMN22448603 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX018137556653/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661855 SAMN22448600 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX021879019502/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.52 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661856 SAMN22448599 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX022239593170/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.75 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661857 SAMN22448598 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX022384865165/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661858 SAMN22448597 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX023316083085/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.25 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661859 SAMN22447366 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX025538009846/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661860 SAMN22448596 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX025956578802/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.46 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661861 SAMN22448595 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX026140478955/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661862 SAMN22448594 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX026921415832/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661863 SAMN22448591 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX029145491102/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661865 SAMN22448593 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX028689285013/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.31 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661867 SAMN22447932 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX559897060984/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661869 SAMN22447931 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX562353643196/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.02 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661871 SAMN22447929 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX562719704028/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661873 SAMN22447927 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX563974533987/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.05 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661875 SAMN22447925 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX567121731826/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.59 lineage/clade name AY.19 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661877 SAMN22447923 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX569321570732/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.91 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661879 SAMN22447921 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX571912904560/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661881 SAMN22447919 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX573361569773/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.21 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661883 SAMN22447917 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX573531761684/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.72 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661885 SAMN22447916 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX574037976108/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.18 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661887 SAMN22447913 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX575983358675/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.29 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661888 SAMN22447912 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX576239972387/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.19 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661889 SAMN22447911 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX576571864404/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.47 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661890 SAMN22447910 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX577575087528/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.29 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661891 SAMN22447909 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX578048780307/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661892 SAMN22447908 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX578212159438/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661893 SAMN22447907 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX578385328806/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.72 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661894 SAMN22447906 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX579125068149/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.44 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661895 SAMN22447905 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX581304243683/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.86 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661896 SAMN22447904 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX581681843781/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661897 SAMN22447903 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX582132029599/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.35 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661898 SAMN22447902 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX584236565575/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.68 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661899 SAMN22448116 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX414384426983/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.63 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661900 SAMN22448115 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX414839424927/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.42 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661901 SAMN22448114 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX415566756166/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.88 lineage/clade name AY.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661902 SAMN22448113 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX416542194555/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.03 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661903 SAMN22448111 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX418870123237/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.3 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661904 SAMN22448110 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX419932334662/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.01 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661905 SAMN22448112 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX416736302259/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.67 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661906 SAMN22448109 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX420377047580/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.94 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661907 SAMN22448108 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX420830756151/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661908 SAMN22448107 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX420967003394/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.89 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661909 SAMN22448105 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX422661032832/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.07 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661910 SAMN22448106 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX422583202910/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.34 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661911 SAMN22448103 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX423586032221/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.6 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661912 SAMN22448104 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX423562106489/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.43 lineage/clade name AY.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661913 SAMN22448102 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX423828844537/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.95 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661914 SAMN22448101 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX424308071840/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.13 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661915 SAMN22448100 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX424834898757/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.59 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661916 SAMN22448099 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX425979916123/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.41 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661917 SAMN22448098 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX426029103224/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661918 SAMN22447361 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX427501043645/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.96 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661919 SAMN22448097 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX429457189221/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.43 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661920 SAMN22448096 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX430214037312/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.89 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661921 SAMN22448094 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX433565480647/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.82 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661922 SAMN22448093 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX433652000248/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.56 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661923 SAMN22448095 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX433256819273/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661924 SAMN22448092 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX433900754763/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.92 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661925 SAMN22448090 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX435976434917/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661926 SAMN22448091 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX435438506459/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.62 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661927 SAMN22448089 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX436102096347/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.86 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661928 SAMN22447360 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX436361688832/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.77 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661929 SAMN22448088 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX437239296532/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.64 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661930 SAMN22448087 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX437795708080/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.08 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661931 SAMN22448528 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX086567121565/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661932 SAMN22448527 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX086845462107/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.61 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661933 SAMN22448526 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX087695337794/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.9 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661934 SAMN22448524 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX088345463712/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.2 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661935 SAMN22448525 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX087928187192/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.58 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661936 SAMN22448523 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX089068340734/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661937 SAMN22448522 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX089261936283/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.06 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661938 SAMN22448521 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX089608802071/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.34 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661939 SAMN22448520 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX089976568365/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.74 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661940 SAMN22448519 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX089992841580/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.68 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661941 SAMN22448518 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX092576777100/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.76 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661942 SAMN22448517 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX092871045013/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.6 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661943 SAMN22448516 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX092887444295/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.05 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661944 SAMN22448515 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX093252741281/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.9 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661945 SAMN22448514 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX096232814684/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.11 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661946 SAMN22448513 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX096330468887/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661947 SAMN22448511 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX099285391212/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661948 SAMN22448512 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX097055119446/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.35 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661949 SAMN22448510 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX100378913143/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.99 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661950 SAMN22447409 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/ND-CDC-IBX100776122492/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: North Dakota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.73 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661951 SAMN22448508 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX101306098089/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.21 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661952 SAMN22448509 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX100822395981/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.07 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661953 SAMN22448505 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX103806698504/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661954 SAMN22448507 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX101336122887/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.52 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661955 SAMN22448506 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX101428984195/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661956 SAMN22448504 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX104158904955/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.68 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661957 SAMN22448503 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX104955153593/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661958 SAMN22448502 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX106737140440/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661959 SAMN22448501 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX107438113108/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.47 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661960 SAMN22448499 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX110332169045/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661961 SAMN22448500 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX108769980921/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.66 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661962 SAMN22448498 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX111897564387/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.73 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661963 SAMN22448497 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX113711591164/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.06 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661964 SAMN22448496 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX114566116428/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.13 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661965 SAMN22448495 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX114581097288/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.91 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661966 SAMN22448493 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX115411723669/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.73 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661967 SAMN22448492 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX116562437618/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661968 SAMN22448494 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX115346453321/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661969 SAMN22448491 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX116806256126/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.38 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661970 SAMN22448490 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX117454213168/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661971 SAMN22448489 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX118338675734/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661972 SAMN22448488 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX118413590247/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.89 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661973 SAMN22448487 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX118860527763/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661974 SAMN22448486 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX120498684609/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.63 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661975 SAMN22448485 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX120628293354/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661976 SAMN22448484 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX120682532159/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.76 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661977 SAMN22448483 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX120807617348/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661978 SAMN22448482 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX121940520090/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661979 SAMN22448481 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX124499831268/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661980 SAMN22448480 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX127455025171/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.48 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661981 SAMN22448479 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX127739118285/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661982 SAMN22448477 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX128240785518/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.4 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661983 SAMN22448478 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX127867552593/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661984 SAMN22448476 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX128470752287/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661985 SAMN22448475 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX130374897292/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.42 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661986 SAMN22448474 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX130568531288/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661987 SAMN22448473 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX132658871486/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.2 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661988 SAMN22448472 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX133232551185/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.9 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661989 SAMN22448471 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX134958494117/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.27 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661990 SAMN22448470 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX135755276024/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.63 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661991 SAMN22448469 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX135775995706/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.79 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661992 SAMN22448468 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX136516692096/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.1 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661993 SAMN22447364 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX136574674333/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.85 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661994 SAMN22448323 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX231104434872/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.21 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661995 SAMN22448467 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX136523265132/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.37 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661996 SAMN22448322 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX231732438959/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.22 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661997 SAMN22448321 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX232167568065/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.79 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661998 SAMN22448320 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX233493888090/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.04 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10661999 SAMN22448319 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX233973323457/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.76 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662000 SAMN22448317 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX235820321324/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.66 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662001 SAMN22448316 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX235941721473/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.83 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662002 SAMN22448318 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX234535986791/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662003 SAMN22448315 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX237561207684/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.04 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662004 SAMN22448314 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX237785785306/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.44 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662005 SAMN22447370 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NY-CDC-IBX237976844623/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.13 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662006 SAMN22448313 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX238343829459/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.7 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662007 SAMN22448311 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX238599058848/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.59 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662008 SAMN22448312 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX238562585122/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.94 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662009 SAMN22448310 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX239477826531/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662010 SAMN22448309 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX239644502244/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.44 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662011 SAMN22448308 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX241161996075/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.39 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662012 SAMN22448307 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX241795974454/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.94 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662013 SAMN22448306 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX242394748311/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.72 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662014 SAMN22448305 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX245452309273/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.43 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662015 SAMN22448304 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX245544987299/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.2 lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662016 SAMN22448303 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX245794162762/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.39 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662017 SAMN22447394 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX246042978019/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662018 SAMN22448302 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX247149667804/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662019 SAMN22448301 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX248662884150/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.02 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662020 SAMN22448466 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX138191870330/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662021 SAMN22448465 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX138540096933/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662022 SAMN22448464 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX141505968318/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662023 SAMN22448463 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX141814690661/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.4 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662024 SAMN22447349 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX141854286149/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662025 SAMN22448462 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX142209535961/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.54 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662026 SAMN22448461 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX142967569428/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.13 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662027 SAMN22448460 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX143203297277/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662028 SAMN22448459 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX143316414215/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.85 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662029 SAMN22448458 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX143566171821/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.46 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662030 SAMN22448457 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX145643778314/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.26 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662031 SAMN22448456 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX145920011738/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.86 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662032 SAMN22448455 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX146284115620/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662033 SAMN22448454 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX146318060974/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.52 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662034 SAMN22448453 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX149425552863/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662035 SAMN22448452 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX149738436626/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.74 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662036 SAMN22448450 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX150204349187/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.9 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662037 SAMN22448451 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX150199638969/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662038 SAMN22448449 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX150803209528/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.22 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662039 SAMN22448448 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX151632958824/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.3 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662040 SAMN22448447 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX152379043672/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662041 SAMN22448446 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX152690514537/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.84 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662042 SAMN22448445 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX156339732820/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.63 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662043 SAMN22448444 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX156766792039/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662044 SAMN22448443 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX156911607854/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.05 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662045 SAMN22448442 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX157585746054/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.63 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662046 SAMN22448440 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX159882694056/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.05 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662047 SAMN22448441 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX158220120047/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.94 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662048 SAMN22448439 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX160498509072/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.95 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662049 SAMN22448438 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX160968711083/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662050 SAMN22448437 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX161157387830/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.62 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662051 SAMN22448436 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX161772906757/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662052 SAMN22448239 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX312679101679/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.45 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662053 SAMN22448238 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX313170188342/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.45 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662054 SAMN22448237 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX313823739133/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.83 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662055 SAMN22448236 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX314573415987/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662056 SAMN22448234 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX315477946940/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 10.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662057 SAMN22448235 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX314612043271/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662058 SAMN22448233 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX315855244724/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.76 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662059 SAMN22448232 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX316214780345/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.64 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662060 SAMN22448231 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX317811155856/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.43 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662061 SAMN22448229 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX318748638758/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.05 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662062 SAMN22448230 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX317950650598/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.87 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662063 SAMN22448228 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX320040818149/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.35 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662064 SAMN22448227 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX320234523856/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.97 lineage/clade name AY.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662065 SAMN22448226 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX320911606157/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.07 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662066 SAMN22448225 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX321993908669/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.27 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662067 SAMN22448223 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX325844305527/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662068 SAMN22448224 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX324333742776/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662069 SAMN22448222 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX326450362131/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.37 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662070 SAMN22448221 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX326744529158/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662071 SAMN22448220 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX326888722616/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662072 SAMN22448219 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX326972945287/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.23 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662073 SAMN22448218 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX327134728882/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.15 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662074 SAMN22448217 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX327906253207/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.69 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662075 SAMN22448216 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX328012163273/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.24 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662076 SAMN22448215 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX329029553552/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.97 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662077 SAMN22448214 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX329139698037/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.6 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662078 SAMN22448213 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX329277088132/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.42 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662079 SAMN22447362 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX329756134035/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.01 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662080 SAMN22448212 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX329868151602/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.03 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662081 SAMN22448211 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX329888356846/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.52 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662082 SAMN22448210 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX329975068160/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.9 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662083 SAMN22448626 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/ID-CDC-IBX331807822882/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Idaho host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.49 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662084 SAMN22447965 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX542408125910/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.34 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662085 SAMN22447964 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX542565808130/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.36 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662086 SAMN22447963 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX542609093847/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.7 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662087 SAMN22447962 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX542999670054/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662088 SAMN22447961 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX543194130520/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.8 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662089 SAMN22447960 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX543924468386/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662090 SAMN22447959 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX544759214726/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.88 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662091 SAMN22447957 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX546986409013/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.3 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662092 SAMN22447958 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX545067086333/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 10.56 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662093 SAMN22447956 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX546990169422/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.71 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662094 SAMN22447955 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX547495358226/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.57 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662095 SAMN22447954 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX547742850845/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662096 SAMN22447953 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX547753761655/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.87 lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662097 SAMN22447952 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX547782275905/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.22 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662098 SAMN22447951 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX548680194406/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.13 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662099 SAMN22447950 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX549817903610/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662100 SAMN22447948 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX551058460432/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.29 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662101 SAMN22447949 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX550720300160/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.43 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662102 SAMN22447947 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX551832802696/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662103 SAMN22447946 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX552099847203/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662104 SAMN22447945 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX552613261688/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.59 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662105 SAMN22447944 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX554387110350/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.12 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662106 SAMN22447943 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX555240607149/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.79 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662107 SAMN22447942 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX555358392500/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.01 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662108 SAMN22447941 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX555812462505/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.6 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662109 SAMN22447939 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX556254432615/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.53 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662110 SAMN22447940 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX556206616737/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.17 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662111 SAMN22447938 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX556787637930/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662112 SAMN22447937 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX556894991392/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.36 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662113 SAMN22447936 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX556905912660/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662114 SAMN22447934 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX559536902557/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662115 SAMN22447935 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX559410555664/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662116 SAMN22448435 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX162140636153/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.97 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662117 SAMN22448434 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX162804063827/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.08 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662118 SAMN22448433 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX163047281649/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.18 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662119 SAMN22448432 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX163853897419/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.11 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662120 SAMN22448431 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX163922738007/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.77 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662121 SAMN22448430 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX164068393804/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.17 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662122 SAMN22448429 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX164688089059/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.88 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662123 SAMN22448428 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX165469092560/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.37 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662124 SAMN22448427 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX165645743543/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662125 SAMN22448424 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX166581490414/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662126 SAMN22448426 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX165730278548/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.95 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662127 SAMN22448425 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX166246351002/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.8 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662128 SAMN22448423 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX166930382006/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.71 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662129 SAMN22448422 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX167513291967/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662130 SAMN22448421 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX167524164373/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.31 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662131 SAMN22448420 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX167971607490/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.63 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662132 SAMN22448419 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX168685320617/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.57 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662133 SAMN22448418 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX169030505237/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.13 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662134 SAMN22448417 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX169393625281/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662135 SAMN22448416 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX170884511517/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.73 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662136 SAMN22448414 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX171402467268/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662137 SAMN22448415 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX171135450630/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.82 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662138 SAMN22448413 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX172439638828/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.2 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662139 SAMN22448412 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX178113522888/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.1 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662140 SAMN22447399 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX178732924141/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.82 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662141 SAMN22448411 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX179783636602/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.43 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662142 SAMN22448410 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX183933148815/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.02 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662143 SAMN22448409 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX184179052701/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.3 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662144 SAMN22448408 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX184674982048/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.09 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662145 SAMN22448407 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX184807593710/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.66 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662146 SAMN22448406 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX185076357782/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.59 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662147 SAMN22448209 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX332028416853/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662148 SAMN22448405 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX186738520241/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.54 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662149 SAMN22448208 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX336083542366/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.43 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662150 SAMN22448207 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX336110644983/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.32 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662151 SAMN22448206 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX336984168213/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.4 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662152 SAMN22448205 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX337024048147/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.14 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662153 SAMN22448204 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX337066442943/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.28 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662154 SAMN22448203 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX337227654418/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.57 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662155 SAMN22448202 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX337980496236/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.49 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662156 SAMN22448200 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX340604088127/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.32 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662157 SAMN22448201 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX340346444615/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.04 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662158 SAMN22448199 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX342301982017/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.49 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662159 SAMN22448198 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX342317896018/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662160 SAMN22448197 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX342826406625/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662161 SAMN22448196 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX343831284648/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.36 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662162 SAMN22448195 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX343940672478/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662163 SAMN22448194 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX345694335117/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662164 SAMN22448193 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX346420860635/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.45 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662165 SAMN22448192 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX346768266291/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.14 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662166 SAMN22448191 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX346906181380/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662167 SAMN22448190 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX347379403542/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662168 SAMN22448189 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX348135226686/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.97 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662169 SAMN22448187 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX352606271544/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.33 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662170 SAMN22448188 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX348550026793/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.55 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662171 SAMN22448186 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX353694959193/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662172 SAMN22448185 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX353884015674/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662173 SAMN22448184 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX354572257155/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.26 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662174 SAMN22448181 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX356833030405/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662175 SAMN22448183 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX354874839640/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.62 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662176 SAMN22448182 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX354903888398/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.27 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662177 SAMN22448180 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX358667820850/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.44 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662178 SAMN22448179 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX358814435899/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.02 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662179 SAMN22448178 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX359163968522/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662180 SAMN22448404 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX188725837751/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.25 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662181 SAMN22447398 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX189447522046/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.34 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662182 SAMN22448403 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX189745936494/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.73 lineage/clade name AY.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662183 SAMN22448401 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX191811573734/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.27 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662184 SAMN22447397 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX191853394818/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662185 SAMN22448402 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX189803082367/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.58 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662186 SAMN22448400 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX192629397521/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.48 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662187 SAMN22448399 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX193048371483/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.06 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662188 SAMN22448398 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX193871460429/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.59 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662189 SAMN22448397 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX194136973696/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.96 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662190 SAMN22448396 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX194597703988/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.45 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662191 SAMN22448395 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX195464621632/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.74 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662192 SAMN22448394 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX196128112444/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662193 SAMN22448393 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX197311717749/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662194 SAMN22448392 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX198181955941/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.98 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662195 SAMN22448391 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX198229103060/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.44 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662196 SAMN22448390 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX199187038308/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.66 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662197 SAMN22447396 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX199289540142/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.8 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662198 SAMN22448389 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX199906504668/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.06 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662199 SAMN22448388 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX200715849871/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662200 SAMN22448387 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX200788425595/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.12 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662201 SAMN22448386 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX201055889893/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.28 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662202 SAMN22448385 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX202629321589/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.48 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662203 SAMN22448384 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX202970262160/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662204 SAMN22448383 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX203094012240/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.39 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662205 SAMN22447363 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX203259731253/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.39 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662206 SAMN22448382 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX203373802072/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.95 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662207 SAMN22448381 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX203868512544/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662208 SAMN22448380 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX204050229918/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.75 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662209 SAMN22447353 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/TX-CDC-IBX205435808672/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Texas host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662210 SAMN22448379 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX207501324316/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662211 SAMN22448378 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX207843891982/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.73 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662212 SAMN22448177 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX359652296185/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.95 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662213 SAMN22448176 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX359652363447/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.71 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662214 SAMN22448175 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX361136093701/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.47 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662215 SAMN22448174 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX361985877041/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.74 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662216 SAMN22448173 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX363411160452/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.47 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662217 SAMN22448172 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX364631358892/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.48 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662218 SAMN22448171 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX365087430841/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.05 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662219 SAMN22448170 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX365351476245/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662220 SAMN22448169 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX366002268164/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.16 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662221 SAMN22448168 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX366320401237/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662222 SAMN22448167 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX367784277185/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.46 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662223 SAMN22448166 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX369505644098/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.79 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662224 SAMN22448164 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX370198106336/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.73 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662225 SAMN22448165 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX369583695395/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662226 SAMN22448162 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX373241142015/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662227 SAMN22448163 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX371847745442/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662228 SAMN22447390 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX374398507743/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.93 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662229 SAMN22448161 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX376670518720/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662230 SAMN22448160 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX377477120376/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.77 lineage/clade name AY.34 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662231 SAMN22448159 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX377637038600/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.15 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662232 SAMN22448158 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX378790083465/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662233 SAMN22447347 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX379413020375/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.65 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662234 SAMN22448157 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX380462121742/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.31 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662235 SAMN22448156 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX380582596957/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.36 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662236 SAMN22448155 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX380972565970/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.84 lineage/clade name AY.30 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662237 SAMN22448154 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX381780680647/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.38 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662238 SAMN22448153 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX382009752855/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.7 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662239 SAMN22448152 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX382430846740/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.37 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662240 SAMN22448151 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX382633756892/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662241 SAMN22448150 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX384322111796/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.64 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662242 SAMN22448149 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX385240655476/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.54 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662243 SAMN22448148 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX385334854587/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.71 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662244 SAMN22447487 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX939931946435/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.27 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662245 SAMN22447486 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX940587613578/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.26 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662246 SAMN22447484 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX941726342318/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662247 SAMN22447485 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX941605950774/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.51 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662248 SAMN22447482 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX942205829588/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.77 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662249 SAMN22447483 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX942112953217/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.36 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662250 SAMN22447481 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX944765544798/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.52 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662251 SAMN22447480 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX945605750851/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.34 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662252 SAMN22447479 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX945905508808/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.71 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662253 SAMN22447478 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX946684163701/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.75 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662254 SAMN22447477 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX947373327595/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.23 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662255 SAMN22447476 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX947787360531/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.6 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662256 SAMN22447475 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX947830003828/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.4 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662257 SAMN22447473 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX948671762767/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662258 SAMN22447474 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX948279497793/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.36 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662259 SAMN22447472 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX948922441977/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.21 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662260 SAMN22447471 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX949405376203/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.88 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662261 SAMN22447470 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX950132311979/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662262 SAMN22447405 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/ND-CDC-IBX950171969410/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: North Dakota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.6 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662263 SAMN22447469 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX951451207571/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662264 SAMN22447468 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX951651381191/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662265 SAMN22447467 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX953132215243/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662266 SAMN22447466 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX957225390428/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.78 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662267 SAMN22447339 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX957120294229/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662268 SAMN22447464 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX957604653757/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662269 SAMN22447465 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX957484588713/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.8 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662270 SAMN22447463 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX958602196033/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.19 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662271 SAMN22447462 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX959451462835/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662272 SAMN22447461 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX959653756306/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.48 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662273 SAMN22447460 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX961548814001/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.91 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662274 SAMN22447459 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX962764642393/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.39 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662275 SAMN22447458 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX963247603541/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.15 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662276 SAMN22447696 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX764837791580/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.64 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662277 SAMN22447695 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX764979319584/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.36 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662278 SAMN22447694 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX765578148862/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.49 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662279 SAMN22447692 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX765987568682/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.31 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662280 SAMN22447693 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX765816977334/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.99 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662281 SAMN22447690 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX767344651762/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.9 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662282 SAMN22447689 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX767735952672/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.43 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662283 SAMN22447691 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX767095803794/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.33 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662284 SAMN22447688 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX768279824024/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662285 SAMN22447687 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX768683020615/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.67 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662286 SAMN22447686 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX768781642002/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.95 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662287 SAMN22447685 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX768915141079/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.54 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662288 SAMN22447684 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX771913960331/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662289 SAMN22447683 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX772247496948/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.42 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662290 SAMN22447377 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX772348862763/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.38 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662291 SAMN22447682 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX772495571356/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.82 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662292 SAMN22447376 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX773754493608/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.21 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662293 SAMN22447680 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX774295070655/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.62 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662294 SAMN22447681 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX774109717894/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.95 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662295 SAMN22447679 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX774746676214/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662296 SAMN22447678 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX776637434965/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.66 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662297 SAMN22447677 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX777679881471/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.07 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662298 SAMN22447375 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX778784130094/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.11 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662299 SAMN22447676 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX778644612511/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.52 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662300 SAMN22447675 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX778837816061/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.7 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662301 SAMN22447674 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX779429991149/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.05 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662302 SAMN22447673 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX779988231768/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.71 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662303 SAMN22447672 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX780677968731/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662304 SAMN22447671 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX783536004618/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.16 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662305 SAMN22447344 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX783613594583/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.66 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662306 SAMN22447670 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX784135327245/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.26 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662307 SAMN22447669 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX784296262326/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.45 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662308 SAMN22447668 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX784736046129/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.17 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662309 SAMN22447667 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX784762518654/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.14 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662310 SAMN22447666 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX786904607871/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.38 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662311 SAMN22447665 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX787331615115/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662312 SAMN22447664 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX788769243180/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.99 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662313 SAMN22447663 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX789817825048/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662314 SAMN22447662 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX790512150867/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.38 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662315 SAMN22447661 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX790768002713/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.39 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662316 SAMN22447660 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX791979216846/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.95 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662317 SAMN22447659 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX792184921678/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.33 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662318 SAMN22447658 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX792774697843/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.78 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662319 SAMN22447657 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX793258229020/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.87 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662320 SAMN22447354 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/SD-CDC-IBX793756335653/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: South Dakota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.69 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662321 SAMN22447656 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX794027328140/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.81 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662322 SAMN22447655 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX798719998261/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.53 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662323 SAMN22447654 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX798788696118/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.55 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662324 SAMN22447653 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX798934765439/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662325 SAMN22447652 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX799394039675/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.77 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662326 SAMN22447651 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX800314629810/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.54 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662327 SAMN22447650 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX803049714411/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662328 SAMN22447374 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX802288437634/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662329 SAMN22447649 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX803713096897/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.49 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662330 SAMN22447648 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX803727558420/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.92 lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662331 SAMN22447647 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX804216432012/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662332 SAMN22447646 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX805767280306/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.59 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662333 SAMN22447645 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX807435226994/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.9 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662334 SAMN22447644 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX808894803004/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662335 SAMN22447642 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX810033999562/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.95 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662336 SAMN22447643 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX809588620985/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.4 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662337 SAMN22447641 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX810215440941/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.51 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662338 SAMN22447640 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX810429745901/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.66 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662339 SAMN22447639 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX810989721845/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.34 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662340 SAMN22447457 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX963307663940/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.21 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662341 SAMN22447456 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX964195551376/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.82 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662342 SAMN22447454 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX964746150852/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662343 SAMN22447453 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX964955861823/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.86 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662344 SAMN22447455 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX964627232105/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.4 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662345 SAMN22447452 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX965314502192/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662346 SAMN22447451 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX965962470010/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.81 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662347 SAMN22447450 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX966412046116/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662348 SAMN22447448 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX966820953642/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662349 SAMN22447447 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX967185255120/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.9 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662350 SAMN22447449 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX966457995018/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.19 lineage/clade name AY.7 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662351 SAMN22447445 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX968857559661/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.21 lineage/clade name AY.19 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662352 SAMN22447446 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX968342195093/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.28 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662353 SAMN22447338 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX968866473386/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.77 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662354 SAMN22447443 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX969270562604/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.92 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662355 SAMN22447444 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX969159476175/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.6 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662356 SAMN22448299 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX251755311198/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.25 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662357 SAMN22448300 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX250097967716/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.78 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662358 SAMN22448298 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX251915855817/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.45 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662359 SAMN22447393 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX251808835616/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.03 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662360 SAMN22447408 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/ND-CDC-IBX252582000517/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: North Dakota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.82 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662361 SAMN22448297 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX253588893906/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.19 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662362 SAMN22448296 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX254294983016/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.5 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662363 SAMN22448085 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX440573932807/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.56 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662364 SAMN22448084 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX441016185943/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.4 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662365 SAMN22448086 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX438961018474/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.25 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662366 SAMN22448082 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX441697311972/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.8 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662367 SAMN22448083 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX441513368897/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.66 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662368 SAMN22447389 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX442158791519/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662369 SAMN22448080 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX442916116507/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.4 lineage/clade name AY.5 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662370 SAMN22448081 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX442607543921/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662371 SAMN22448079 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX443370789553/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.17 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662372 SAMN22448077 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX443779500971/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.04 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662373 SAMN22448078 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX443663079974/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662374 SAMN22448075 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX445606736910/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.54 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662375 SAMN22448074 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX446453263769/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.22 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662376 SAMN22448076 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX445184560777/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.98 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662377 SAMN22448073 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX446547748236/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.59 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662378 SAMN22448072 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX448026603365/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.03 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662379 SAMN22448071 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX448065752723/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.06 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662380 SAMN22448070 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX448753317303/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.87 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662381 SAMN22448069 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX449012462027/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.46 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662382 SAMN22448068 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX449277021864/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.51 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662383 SAMN22448067 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX449880179544/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662384 SAMN22448066 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX450062061527/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.73 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662385 SAMN22448065 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX450189139180/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.39 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662386 SAMN22448064 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX451438021212/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662387 SAMN22448063 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX453142344953/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662388 SAMN22448062 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX453229667610/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.15 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662389 SAMN22448061 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX454146852916/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.99 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662390 SAMN22448060 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX454430611825/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662391 SAMN22448059 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX455349119351/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.55 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662392 SAMN22448058 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX455507360531/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.36 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662393 SAMN22448057 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX456176949598/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662394 SAMN22448056 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX458051393512/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.87 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662395 SAMN22448054 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX459705290155/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.56 lineage/clade name AY.29 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662396 SAMN22448055 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX459117738823/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.38 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662397 SAMN22448053 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX460720140025/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.33 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662398 SAMN22448052 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX462895773893/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662399 SAMN22448051 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX466627344503/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.85 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662400 SAMN22448050 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX467673421339/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662401 SAMN22448049 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX468454342547/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.21 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662402 SAMN22448048 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX468546376263/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662403 SAMN22448047 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX470037405977/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.8 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662404 SAMN22448046 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX470161371763/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.61 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662405 SAMN22448045 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX470465761819/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.84 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662406 SAMN22448044 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX471595508454/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.94 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662407 SAMN22448041 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX473263765620/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.52 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662408 SAMN22448042 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX473069939871/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.44 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662409 SAMN22448040 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX473893332156/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.59 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662410 SAMN22448043 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX471906752110/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.89 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662411 SAMN22448039 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX474327947409/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.98 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662412 SAMN22448038 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX474671405878/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.28 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662413 SAMN22448037 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX475855428351/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.55 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662414 SAMN22448036 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX477081807988/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.48 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662415 SAMN22448035 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX480363948142/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.82 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662416 SAMN22448034 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX481997633822/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.27 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662417 SAMN22448033 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX482974879789/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.9 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662418 SAMN22448032 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX484042439222/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662419 SAMN22448029 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX488422119095/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.69 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662420 SAMN22448030 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX485235372162/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.22 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662421 SAMN22448028 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX488489168556/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.35 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662422 SAMN22448031 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX484975286774/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.06 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662423 SAMN22448027 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX490021700878/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.48 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662424 SAMN22448026 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX492121013787/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.48 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662425 SAMN22448024 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX493185517222/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.57 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662426 SAMN22448025 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX492904194348/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.63 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662427 SAMN22448295 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX254909856188/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.45 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662428 SAMN22447336 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WY-CDC-IBX256119920313/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wyoming host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.42 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662429 SAMN22448294 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX256315566999/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.85 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662430 SAMN22448293 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX257369392680/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.43 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662431 SAMN22448292 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX257556612298/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662432 SAMN22448291 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX258677039671/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.38 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662433 SAMN22447367 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/OH-CDC-IBX259021913170/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Ohio host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.39 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662434 SAMN22447369 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NY-CDC-IBX259727272015/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.98 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662435 SAMN22448290 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX261683748611/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662436 SAMN22448289 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX262487513356/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.6 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662437 SAMN22448288 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX264559507630/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.92 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662438 SAMN22448287 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX264847571195/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662439 SAMN22448286 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX265370599581/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.53 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662440 SAMN22448285 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX265975020674/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.21 lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662441 SAMN22448284 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX267857152062/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662442 SAMN22448283 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX268372259316/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.6 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662443 SAMN22448282 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX269002787653/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662444 SAMN22448281 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX269232601828/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.22 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662445 SAMN22448280 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX270629661170/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.69 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662446 SAMN22448279 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX271093548325/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.42 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662447 SAMN22448278 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX272291905654/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662448 SAMN22448277 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX272643256595/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.14 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662449 SAMN22448276 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX273122084445/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.63 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662450 SAMN22448275 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX274698835890/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662451 SAMN22448274 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX275017842827/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662452 SAMN22447392 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX276359327131/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.48 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662453 SAMN22448273 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX277729666211/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.92 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662454 SAMN22448272 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX277787908244/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662455 SAMN22448271 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX279186889399/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.49 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662456 SAMN22448270 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX279245366223/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662457 SAMN22448269 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX279375697138/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662458 SAMN22448268 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX281035484311/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.8 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662459 SAMN22448023 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX495683638764/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.37 lineage/clade name AY.29 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662460 SAMN22448022 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX495831055650/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.94 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662461 SAMN22448021 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX496129809883/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.29 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662462 SAMN22448020 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX496709237789/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.59 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662463 SAMN22447359 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX496487994637/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.18 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662464 SAMN22448019 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX497732588647/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.49 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662465 SAMN22448018 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX499063574363/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.1 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662466 SAMN22448017 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX499114752699/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.93 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662467 SAMN22448016 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX499389785729/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.27 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662468 SAMN22448015 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX499697119551/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662469 SAMN22448014 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX500116880665/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.53 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662470 SAMN22448012 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX500449621130/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.28 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662471 SAMN22448013 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX500127198475/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.86 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662472 SAMN22448011 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX500760004441/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.96 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662473 SAMN22448009 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX501810537091/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662474 SAMN22448010 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX501757611382/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.67 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662475 SAMN22448008 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX502479558039/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.91 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662476 SAMN22448007 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX502589776701/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662477 SAMN22448006 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX502852581909/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662478 SAMN22448005 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX504249743587/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.81 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662479 SAMN22448004 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX504953579856/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662480 SAMN22448003 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX506570133349/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662481 SAMN22447388 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX510091767540/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662482 SAMN22448001 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX509066645434/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662483 SAMN22448000 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX510129719895/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.88 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662484 SAMN22448002 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX507610831515/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.83 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662485 SAMN22447999 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX510951681287/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662486 SAMN22447998 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX511515375535/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662487 SAMN22447997 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX511515716864/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.24 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662488 SAMN22447996 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX511966519174/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.04 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662489 SAMN22447995 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX514353447182/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.46 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662490 SAMN22447994 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX515034714463/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.22 lineage/clade name AY.19 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662491 SAMN22448267 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX281302691048/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.12 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662492 SAMN22448627 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/ID-CDC-IBX282657695874/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Idaho host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.4 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662493 SAMN22448265 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX283453933624/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.2 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662494 SAMN22448266 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX282836010101/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.97 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662495 SAMN22448264 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX283804007346/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.51 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662496 SAMN22448262 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX284476375608/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.4 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662497 SAMN22448263 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX283840868026/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.19 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662498 SAMN22448261 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX285366697193/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.35 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662499 SAMN22448260 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX286028065737/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662500 SAMN22448259 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX286040157422/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.64 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662501 SAMN22447348 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX286465879186/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.09 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662502 SAMN22448256 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX288828583471/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.8 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662503 SAMN22448257 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX288643992926/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.51 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662504 SAMN22448255 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX288858118269/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.13 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662505 SAMN22448258 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX286998310602/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.74 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662506 SAMN22448254 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX290781627995/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662507 SAMN22448253 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX291282091325/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.34 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662508 SAMN22448252 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX292786091319/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.96 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662509 SAMN22448251 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX296224329466/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.48 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662510 SAMN22448250 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX298879798753/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662511 SAMN22448249 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX300121010592/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.5 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662512 SAMN22447352 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/VA-CDC-IBX300273214122/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Virginia host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.08 lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662513 SAMN22447391 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX300436312222/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.42 lineage/clade name AY.7.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662514 SAMN22448248 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX301070493538/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.71 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662515 SAMN22448246 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX302757833088/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.47 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662516 SAMN22448245 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX304313840288/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.82 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662517 SAMN22448247 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX301648206413/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.42 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662518 SAMN22448244 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX307491257491/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.5 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662519 SAMN22448243 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX307626388979/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662520 SAMN22448241 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX308858589019/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.45 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662521 SAMN22448242 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX308419453601/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.66 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662522 SAMN22448240 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX311498878520/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662523 SAMN22447993 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX515784991261/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.46 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662524 SAMN22447991 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX516510162351/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.89 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662525 SAMN22447990 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX517029500001/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662526 SAMN22447992 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX516430259348/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.96 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662527 SAMN22447335 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WY-CDC-IBX517473107479/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wyoming host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.81 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662528 SAMN22447989 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX517869238706/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.33 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662529 SAMN22447407 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/ND-CDC-IBX518555581669/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: North Dakota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.17 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662530 SAMN22447988 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX519877662388/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.64 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662531 SAMN22447987 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX519882170490/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.47 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662532 SAMN22447986 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX521037953069/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662533 SAMN22447985 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX521499831952/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.59 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662534 SAMN22447984 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX521606425858/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.18 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662535 SAMN22447983 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX523748756404/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662536 SAMN22447982 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX524437893904/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.06 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662537 SAMN22447981 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX524733914551/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.73 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662538 SAMN22447980 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX525365816717/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.62 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662539 SAMN22447404 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NJ-CDC-IBX525706216569/2021 collected_by Infinity Biologix collection_date 2021-10-10 isolation_source nasal swab geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.99 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662540 SAMN22447979 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX527855689470/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.18 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662541 SAMN22447978 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX528748918087/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.96 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662542 SAMN22447977 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX529051688582/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.15 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662543 SAMN22447976 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX529074629248/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.64 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662544 SAMN22447975 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX529420355061/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.15 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662545 SAMN22447974 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX530851446334/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.71 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662546 SAMN22447973 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX530877627415/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662547 SAMN22447972 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX531516358334/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.79 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662548 SAMN22447971 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX531847692356/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.79 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662549 SAMN22447387 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX532131878750/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.49 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662550 SAMN22447970 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX533049775996/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662551 SAMN22447969 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX533647656381/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.36 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662552 SAMN22447968 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX536285199553/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662553 SAMN22447967 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX537500081970/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.4 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662554 SAMN22447966 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX540768661324/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.73 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662555 SAMN22447725 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX738466440657/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.74 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662556 SAMN22447723 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX739472560706/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.82 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662557 SAMN22447724 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX738966803106/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.09 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662558 SAMN22447722 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX739607066093/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662559 SAMN22447721 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX739828812531/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.36 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662560 SAMN22447720 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX739975774096/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662561 SAMN22447719 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX740398346978/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.2 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662562 SAMN22447718 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX740529838352/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.53 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662563 SAMN22447717 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX740687377477/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.92 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662564 SAMN22447378 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX741289733435/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.16 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662565 SAMN22447716 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX741523374078/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.18 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662566 SAMN22447715 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX743203450865/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.43 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662567 SAMN22447714 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX743733985515/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.66 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662568 SAMN22447712 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX745201147658/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.8 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662569 SAMN22447713 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX744210118350/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.64 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662570 SAMN22447711 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX746092607697/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.86 lineage/clade name AY.19 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662571 SAMN22447710 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX746389873666/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.74 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662572 SAMN22447334 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WY-CDC-IBX747253865397/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Wyoming host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662573 SAMN22447709 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX747404040467/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.91 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662574 SAMN22447708 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX748669053912/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.51 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662575 SAMN22447707 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX749146482140/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662576 SAMN22447706 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX751157538572/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.09 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662577 SAMN22447345 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX751342702457/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.95 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662578 SAMN22447705 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX756131376245/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662579 SAMN22447704 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX756232086524/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662580 SAMN22447702 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX757841653330/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.69 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662581 SAMN22447703 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX757289418331/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.1 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662582 SAMN22447701 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX759060061612/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.94 lineage/clade name AY.33 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662583 SAMN22447700 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX759200862509/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.11 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662584 SAMN22447699 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX761853698703/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.61 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662585 SAMN22447698 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX763865407130/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.32 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662586 SAMN22447697 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX764600655906/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.56 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662587 SAMN22447517 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX914818550603/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.39 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662588 SAMN22447516 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX914858432795/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.51 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662589 SAMN22447515 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX914864920233/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.35 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662590 SAMN22447514 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX915898542511/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.21 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662591 SAMN22447513 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX916506472454/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.44 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662592 SAMN22447512 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX916789372250/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.73 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662593 SAMN22447511 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX917505216395/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662594 SAMN22447510 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX917507425747/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.33 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662595 SAMN22447509 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX917941356025/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.02 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662596 SAMN22447508 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX918445289949/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.72 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662597 SAMN22447506 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX919364498269/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.48 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662598 SAMN22447507 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX919129255575/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.81 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662599 SAMN22447505 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX921853225597/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.06 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662600 SAMN22447504 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX925099353417/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.74 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662601 SAMN22447503 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX926576290375/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.55 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662602 SAMN22447502 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX927065571609/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.09 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662603 SAMN22447371 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX922471419899/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.83 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662604 SAMN22447500 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX928556868586/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.95 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662605 SAMN22447499 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX928573564028/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.11 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662606 SAMN22447501 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX928406859000/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.2 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662607 SAMN22447498 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX929402838262/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.79 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662608 SAMN22447497 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX929930660153/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.63 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662609 SAMN22447496 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX930139942281/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.38 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662610 SAMN22447340 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX930846973526/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.53 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662611 SAMN22447495 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX931941229873/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662612 SAMN22447493 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX934923763734/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662614 SAMN22447492 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX935024023498/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.28 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662615 SAMN22447491 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX936214724188/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.93 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662616 SAMN22447490 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX936989482642/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.09 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662617 SAMN22447489 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX937017583970/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662618 SAMN22447488 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX939216796504/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.34 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662619 SAMN22448628 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/CA-CDC-IBX971817665226/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: California host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.79 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662620 SAMN22447442 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX973594982756/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.13 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662621 SAMN22447441 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX974026924617/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.65 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662622 SAMN22447440 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX977162423938/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.68 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662624 SAMN22447439 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX977293175081/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.57 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662626 SAMN22447436 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX978940397331/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.02 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662628 SAMN22447434 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX980279027265/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662630 SAMN22447432 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX981034702727/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.62 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662632 SAMN22447430 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX982435685608/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662634 SAMN22447428 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX983459950583/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.27 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662636 SAMN22448588 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX032657462441/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662638 SAMN22448586 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX033284447188/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.26 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662640 SAMN22448584 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX036627291989/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.15 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662642 SAMN22448582 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX036689940869/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.81 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662644 SAMN22448580 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX039453726173/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662646 SAMN22448579 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX040402165486/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.89 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662648 SAMN22448576 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX042811698790/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662650 SAMN22447350 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX044543929976/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.18 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662652 SAMN22448574 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX045012322120/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662654 SAMN22448571 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX047455501209/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.8 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662656 SAMN22448569 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX049573620516/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.7 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662658 SAMN22447365 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX051060270452/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.62 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662660 SAMN22448566 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX053646089289/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.62 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662662 SAMN22448564 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX054841113944/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.22 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662664 SAMN22448561 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX056960563645/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.66 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662666 SAMN22448560 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX057013453418/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.82 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662613 SAMN22447494 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX934843202479/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.08 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662623 SAMN22447438 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX977662047088/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662625 SAMN22447437 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX978160302867/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.74 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662627 SAMN22447435 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX980228981725/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.76 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662629 SAMN22447433 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX981006656980/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.43 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662631 SAMN22447431 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX982189224510/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662633 SAMN22447429 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX982821774094/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.17 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662635 SAMN22448589 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX030282215226/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662637 SAMN22448587 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX032913244025/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.42 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662639 SAMN22448585 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX034540002698/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.01 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662641 SAMN22448583 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX036687363122/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662643 SAMN22448581 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX038347727796/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662645 SAMN22448578 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX041246602365/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.02 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662647 SAMN22448577 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX041768556163/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.96 lineage/clade name B.1.1.294 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662649 SAMN22448575 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX043309790952/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.33 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662651 SAMN22448573 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX045310890056/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662653 SAMN22448572 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX045718147468/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.62 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662655 SAMN22448570 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX048111672419/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662657 SAMN22448568 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX050598138382/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.21 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662659 SAMN22448567 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX052641362929/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.85 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662661 SAMN22448565 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX054195866711/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.66 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662663 SAMN22448563 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX055479346586/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.59 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662665 SAMN22448562 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX056722566610/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662667 SAMN22447373 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX811798361548/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.45 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662668 SAMN22447638 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX811229661709/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662669 SAMN22447637 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX812907349348/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.74 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662670 SAMN22447636 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX813363894667/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 10.89 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662671 SAMN22447635 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX814895253360/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662672 SAMN22447634 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX816726027084/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.65 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662673 SAMN22447633 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX817083660335/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.94 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662674 SAMN22447632 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX817348820977/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662675 SAMN22447631 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX818028147181/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.64 lineage/clade name AY.14 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662676 SAMN22447630 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX819843293833/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662677 SAMN22447629 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX820164588733/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.21 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662678 SAMN22447628 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX820902660652/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662679 SAMN22447627 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX823143830053/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.2 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662680 SAMN22447626 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX825037458133/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.65 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662681 SAMN22447625 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX825191055526/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.28 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662682 SAMN22447624 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX826628827694/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.52 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662683 SAMN22447623 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX828067735416/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662684 SAMN22447622 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX829022639725/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662685 SAMN22447343 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX829465185661/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.75 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662686 SAMN22447621 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX830284884125/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662687 SAMN22447620 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX830433388544/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.51 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662688 SAMN22447619 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX830750038791/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662689 SAMN22447618 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX831193928770/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.16 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662690 SAMN22447617 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX831248368022/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662691 SAMN22447616 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX831629102321/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.46 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662692 SAMN22447615 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX832763653874/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.6 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662693 SAMN22447614 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX833093859233/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662694 SAMN22447613 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX833535873628/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.67 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662695 SAMN22447612 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX834303073318/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.61 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662696 SAMN22447611 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX834640068418/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662697 SAMN22447610 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX834897836475/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.16 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662698 SAMN22447609 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX834948749854/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.69 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662699 SAMN22447427 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX985439143241/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.48 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662700 SAMN22447426 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX986003072183/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.91 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662701 SAMN22447425 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX986696992012/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.23 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662702 SAMN22447424 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX987197894562/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.27 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662703 SAMN22447423 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX988636009190/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.42 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662704 SAMN22447422 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX988853475002/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.82 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662705 SAMN22447421 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX988918564205/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662706 SAMN22447337 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX989285138857/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.48 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662707 SAMN22447420 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX989705028280/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.44 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662708 SAMN22447419 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX989871579639/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.7 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662709 SAMN22447418 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX990487493447/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.08 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662710 SAMN22447417 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX991182802323/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662711 SAMN22447416 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX992724842433/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.35 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662712 SAMN22447415 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX993619308147/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662713 SAMN22447414 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX994923089556/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662714 SAMN22447413 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX997835286037/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662715 SAMN22447412 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX997867902913/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.3 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662716 SAMN22447411 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX998255121584/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.96 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662717 SAMN22447410 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX999041039255/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.62 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662718 SAMN22447406 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/ND-CDC-IBX612076236716/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: North Dakota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.55 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662719 SAMN22447872 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX612640068816/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662720 SAMN22447873 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX611024986354/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.53 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662721 SAMN22447871 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX613057609733/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.2 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662722 SAMN22447870 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX613419805261/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.48 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662723 SAMN22447868 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX613834014797/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.99 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662724 SAMN22447869 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX613764489693/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.62 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662725 SAMN22447867 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX614418771075/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.8 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662726 SAMN22447866 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX614968777911/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.07 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662727 SAMN22447865 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX615935012200/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.8 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662728 SAMN22447864 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX616081660054/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.52 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662729 SAMN22447863 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX616629584920/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.14 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662730 SAMN22447862 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX617482524840/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662731 SAMN22447861 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX617750003967/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.77 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662732 SAMN22447860 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX618829220577/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662733 SAMN22447859 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX618977402842/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662734 SAMN22447858 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX620032487413/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.59 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662735 SAMN22447857 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX620737506273/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.91 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662736 SAMN22447383 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX622034134919/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.67 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662737 SAMN22447856 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX622249396994/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.86 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662738 SAMN22447855 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX622302918186/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662739 SAMN22447854 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX623808012504/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.03 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662740 SAMN22447382 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX624263475365/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.59 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662741 SAMN22447853 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX625961004037/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.99 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662742 SAMN22447852 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX626557108393/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.31 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662743 SAMN22447381 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX626699880775/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.95 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662744 SAMN22447380 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX626917605830/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.35 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662745 SAMN22447851 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX627575142358/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.58 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662746 SAMN22447850 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX628868243900/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.67 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662747 SAMN22447849 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX629019112155/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.75 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662748 SAMN22447379 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX630148024392/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662749 SAMN22447848 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX629840552115/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.69 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662750 SAMN22447372 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX836612143049/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.13 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662751 SAMN22447608 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX836664210032/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.09 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662752 SAMN22447607 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX837104749781/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662753 SAMN22447606 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX837711758826/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.14 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662754 SAMN22447604 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX839033837414/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.92 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662755 SAMN22447605 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX837853662191/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.02 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662756 SAMN22447603 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX839806172263/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.65 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662757 SAMN22447602 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX840373570320/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.75 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662758 SAMN22447601 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX840639303940/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.33 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662759 SAMN22447600 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX844895662520/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.98 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662760 SAMN22447342 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX845427510498/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.1 lineage/clade name AY.20 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662761 SAMN22447402 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NJ-CDC-IBX847076415983/2021 collected_by Infinity Biologix collection_date 2021-10-10 isolation_source nasal swab geo_loc_name USA: New Jersey host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.6 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662762 SAMN22447599 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX845673857862/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.37 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662763 SAMN22447598 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX848131007147/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.09 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662764 SAMN22447597 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX848886920876/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.09 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662765 SAMN22447596 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX849774155521/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.25 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662766 SAMN22447595 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX849873786027/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662767 SAMN22447594 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX850437800030/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.56 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662768 SAMN22447593 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX851432341846/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.12 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662769 SAMN22447592 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX852347667523/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.19 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662770 SAMN22447590 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX855108577796/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662771 SAMN22447591 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX854938880447/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.18 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662772 SAMN22447589 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX857462117714/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.8 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662773 SAMN22447588 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX857886189637/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.27 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662774 SAMN22447587 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX859435214791/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.28 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662775 SAMN22447586 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX860577575240/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.77 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662776 SAMN22447585 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX861521548930/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.39 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662777 SAMN22447584 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX862799939422/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.18 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662778 SAMN22447582 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX864777812868/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.86 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662779 SAMN22447583 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX864070129322/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.88 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662780 SAMN22447581 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX865020860795/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.42 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662781 SAMN22447580 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX865174828286/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.26 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662782 SAMN22448624 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX003330739742/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.25 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662783 SAMN22448623 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX003958173410/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662784 SAMN22448622 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX004366548543/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.96 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662785 SAMN22448621 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX004594700367/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.96 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662786 SAMN22447847 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX630373878813/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.76 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662787 SAMN22447845 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX633595238378/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.35 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662788 SAMN22447844 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX633931919752/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.81 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662789 SAMN22447846 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX632847674979/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.74 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662790 SAMN22447843 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX634766095254/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662791 SAMN22447841 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX636810951791/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.03 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662792 SAMN22447842 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX635344998634/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.25 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662793 SAMN22447840 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX637625796658/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.49 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662794 SAMN22447839 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX638961439668/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.54 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662795 SAMN22447838 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX639488341911/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.45 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662796 SAMN22447837 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX640484645321/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.69 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662797 SAMN22447836 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX643450105143/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662798 SAMN22447835 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX643886802368/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662799 SAMN22447834 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX644115895916/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.08 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662800 SAMN22447358 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/PA-CDC-IBX644693389391/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Pennsylvania host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.99 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662801 SAMN22447833 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX644942227965/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662802 SAMN22447831 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX646233839189/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.77 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662803 SAMN22447832 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX645388150648/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662804 SAMN22447830 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX646528638274/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.61 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662805 SAMN22447346 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX647622581732/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.8 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662806 SAMN22447829 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX647654259145/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662807 SAMN22447828 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX648630502649/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.55 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662808 SAMN22447826 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX651255692082/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662809 SAMN22447827 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX648828418977/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.99 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662810 SAMN22447825 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX651957542661/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.63 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662811 SAMN22447824 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX653679726605/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.65 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662812 SAMN22447823 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX654203474382/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.38 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662813 SAMN22447822 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX654218414869/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.87 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662814 SAMN22447821 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX654553967688/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.94 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662815 SAMN22447820 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX654835272595/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.33 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662816 SAMN22447819 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX655531121628/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.41 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662817 SAMN22447818 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX656812541997/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.96 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662818 SAMN22447578 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX865758841852/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662819 SAMN22447579 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX865352117686/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.93 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662820 SAMN22447577 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX865946831253/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.91 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662821 SAMN22447576 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX866176717775/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.33 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662822 SAMN22447575 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX868184796586/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.55 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662823 SAMN22447574 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX869197215712/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.33 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662824 SAMN22447573 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX869493427346/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.37 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662825 SAMN22447572 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX869807131947/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.97 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662826 SAMN22447341 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/WI-CDC-IBX870890725896/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Wisconsin host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.82 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662827 SAMN22447570 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX872148814827/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.97 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662828 SAMN22447571 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX871820222740/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.98 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662829 SAMN22447569 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX873222476817/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.53 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662830 SAMN22447568 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX873321469771/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662831 SAMN22447567 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX873721294821/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662832 SAMN22447566 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX873942230471/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.73 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662833 SAMN22447565 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX874327683126/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662834 SAMN22447563 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX876708539389/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.03 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662835 SAMN22447562 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX877379111337/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.77 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662836 SAMN22447564 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX876639094882/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662837 SAMN22447560 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX879159542326/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662838 SAMN22447561 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX878110329789/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.92 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662839 SAMN22447559 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX879306647715/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.69 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662840 SAMN22447558 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX879416739919/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662841 SAMN22447557 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX880283555559/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.87 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662842 SAMN22447555 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX883041598719/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.06 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662843 SAMN22447556 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX882166961885/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.27 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662844 SAMN22447553 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX885321049900/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.35 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662845 SAMN22447554 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX884977367160/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662846 SAMN22447551 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX887607523446/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662847 SAMN22447552 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX886194505149/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.67 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662848 SAMN22447550 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX887967230142/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.77 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662849 SAMN22447549 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX887969410497/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.37 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662850 SAMN22448559 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX061360198215/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.56 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662851 SAMN22448558 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX061946604508/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.12 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662852 SAMN22448557 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX062342723195/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.75 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662853 SAMN22448555 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX065525533062/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.81 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662854 SAMN22448556 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX063004053053/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662855 SAMN22448554 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX066086993406/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.07 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662856 SAMN22448553 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX066101904105/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.77 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662857 SAMN22448552 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX066417841168/2021 collected_by Infinity Biologix collection_date 2021-10-04 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.6 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662858 SAMN22448549 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX069328254779/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.47 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662859 SAMN22448550 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX067224657969/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.9 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662860 SAMN22448551 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX066594271827/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.4 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662861 SAMN22447400 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NM-CDC-IBX069396450759/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New Mexico host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.29 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662862 SAMN22448548 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX069724184186/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.22 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662863 SAMN22448547 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX069764270392/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.37 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662864 SAMN22448546 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX070147516142/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.31 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662865 SAMN22448545 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX070960347922/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.54 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662866 SAMN22448544 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX071798214667/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.4 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662867 SAMN22448543 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX072544946364/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662868 SAMN22448542 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX073420864394/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.94 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662869 SAMN22448541 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX074009023844/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.88 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662870 SAMN22448540 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX074313336233/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.96 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662871 SAMN22448538 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX075750130871/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.7 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662872 SAMN22448539 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX074699437550/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.64 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662873 SAMN22448537 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX078025020784/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.87 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662874 SAMN22448536 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX078492331925/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.9 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662875 SAMN22448535 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX080577934172/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.85 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662876 SAMN22448534 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX081439684929/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.09 lineage/clade name AY.9 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662877 SAMN22448533 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX081952815841/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.14 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662878 SAMN22448532 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX082091934847/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.47 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662879 SAMN22448531 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX083026032739/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.53 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662880 SAMN22448147 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX386406596295/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662881 SAMN22448530 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX083192082764/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.78 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662882 SAMN22448146 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX388278651917/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.88 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662883 SAMN22448529 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX086101390440/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.15 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662884 SAMN22448145 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX390402364127/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.85 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662885 SAMN22448144 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX390579890442/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.72 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662886 SAMN22448143 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX390916857679/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.6 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662887 SAMN22448141 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX392721306248/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.2 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662888 SAMN22448140 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX392881824223/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.64 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662889 SAMN22448142 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX392253500331/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 29.23 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662890 SAMN22448139 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX394165944722/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.15 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662891 SAMN22448138 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX394669235418/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.76 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662892 SAMN22448625 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/IN-CDC-IBX395757907993/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Indiana host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662893 SAMN22448137 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX396703504562/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 28.97 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662894 SAMN22448136 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX396997198490/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.46 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662895 SAMN22448135 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX397039818964/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.23 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662896 SAMN22448134 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX397832949420/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.28 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662897 SAMN22448133 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX398998246984/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 13.42 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662898 SAMN22448132 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX400030168984/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.86 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662899 SAMN22448131 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX400891082229/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.84 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662900 SAMN22448130 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX401057344142/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.61 lineage/clade name AY.3.1 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662901 SAMN22448129 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX401222479633/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.52 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662902 SAMN22448128 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX402652111651/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.99 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662903 SAMN22448127 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX403791020727/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.52 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662904 SAMN22448126 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX404070100443/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.36 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662905 SAMN22448125 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX405102536360/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 11.58 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662906 SAMN22448124 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX405452666827/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.24 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662907 SAMN22448123 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX405520349019/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.21 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662908 SAMN22448122 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX408454577670/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.76 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662909 SAMN22448121 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX408972225820/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.72 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662910 SAMN22448120 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX409054611713/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.37 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662911 SAMN22448119 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX409814727885/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.77 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662912 SAMN22448118 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX410394773833/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.73 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662913 SAMN22448117 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX414191751486/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.43 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662914 SAMN22447817 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX658170017042/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.21 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662915 SAMN22447816 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX659089419772/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.13 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662916 SAMN22447815 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX659443742376/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.93 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662917 SAMN22447368 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/NY-CDC-IBX660736859219/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: New York host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.56 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662918 SAMN22447814 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX660940233968/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.58 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662919 SAMN22447813 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX661025628048/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.97 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662920 SAMN22447811 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX662218321946/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.11 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662921 SAMN22447812 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX661809741998/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.79 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662922 SAMN22447810 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX663225336959/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.98 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662923 SAMN22447809 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX665916542775/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.25 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662924 SAMN22447808 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX666072813148/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.64 lineage/clade name AY.10 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662925 SAMN22447806 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX667572242081/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.7 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662926 SAMN22447807 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX666404611330/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.55 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662927 SAMN22447804 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX671662915058/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.78 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662928 SAMN22447805 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX671352016844/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.35 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662929 SAMN22447803 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX671715019028/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 21.63 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662930 SAMN22447802 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX672300169344/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.34 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662931 SAMN22447801 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX672877569285/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 27.59 lineage/clade name None BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662932 SAMN22447800 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX673063781513/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.12 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662933 SAMN22447798 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX674340152398/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.72 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662934 SAMN22447797 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX675804151631/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 15.65 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662935 SAMN22447796 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX675978573751/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.18 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662936 SAMN22447799 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX674288078084/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.88 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662937 SAMN22447795 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX676800474607/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 23.13 lineage/clade name B.1.617.2 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662938 SAMN22447794 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX677921362151/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.04 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662939 SAMN22447793 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX678925260246/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.49 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662940 SAMN22447792 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX680814683635/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 25.5 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662941 SAMN22447791 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX681240721010/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.16 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662942 SAMN22447790 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX681723145232/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.23 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662943 SAMN22447789 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX681970520821/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 22.65 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662944 SAMN22447788 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX682481732371/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 17.98 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662945 SAMN22447787 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX682940764963/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 18.13 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662946 SAMN22447785 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX684049830669/2021 collected_by Infinity Biologix collection_date 2021-10-05 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 14.64 lineage/clade name AY.24 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662947 SAMN22447786 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX683002124621/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 20.84 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662948 SAMN22447784 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX684157713863/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 19.3 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662949 SAMN22447783 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX684309552059/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.74 lineage/clade name AY.26 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662950 SAMN22447782 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX687251241677/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.09 lineage/clade name AY.25 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662951 SAMN22447781 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX687961472381/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 12.51 lineage/clade name AY.3 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662952 SAMN22447780 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX688285292934/2021 collected_by Infinity Biologix collection_date 2021-10-06 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 24.84 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662953 SAMN22447779 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX688490084721/2021 collected_by Infinity Biologix collection_date 2021-10-08 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 26.17 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated SRS10662954 SAMN22447778 2697049 Severe acute respiratory syndrome coronavirus 2 bioproject 731149 PRJNA731149 Isolate SARS-CoV-2/Human/USA/MN-CDC-IBX689413828559/2021 collected_by Infinity Biologix collection_date 2021-10-07 isolation_source nasal swab geo_loc_name USA: Minnesota host Homo sapiens host_disease COVID-19 host_sex Unknown host_age Unknown host_race Unknown collection_device Nasal Swab collection_method Nasal Swab purpose_of_sequencing baseline surveillance (random sampling) diagnostic_gene_name_1 N gene diagnostic_pcr_protocol_1 TaqPath diagnostic_pcr_Ct_value_1 16.32 lineage/clade name AY.4 BioSampleModel SARS-CoV-2: clinical or host-associated