<?xml version="1.0" encoding="UTF-8"?>
<STUDY_SET xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
  <STUDY center_name="GEO" alias="GSE186509" accession="SRP342999">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP342999</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject" label="primary">PRJNA774256</EXTERNAL_ID>
      <EXTERNAL_ID namespace="GEO">GSE186509</EXTERNAL_ID>
    </IDENTIFIERS>
    <DESCRIPTOR>
      <STUDY_TITLE>Human intestinal bitter taste receptors regulate innate immune responses and metabolic regulators in obesity</STUDY_TITLE>
      <STUDY_TYPE existing_study_type="Transcriptome Analysis"/>
      <STUDY_ABSTRACT>An expression profiling was conducted to analyse the effect of the bitter tasting compounds denatonium benzoate (DB) or aloin on the transcriptome of human jejunal crypts compared to DMEM-treated crypts. These two bitter compounds are agonists for the human bitter taste receptor TAS2R43. We took advantage of a deletion polymorphism for TAS2R43, that exists in about 33% of the population to compare the effects of the TAS2R43 agonists in obese subjects that express (TAS2R43(+)) or do not express (TAS2R43(-)) TAS2R43.  Primary jejunal crypts from lean (multi-organ donors) or obese (RYGB surgery) subjects were cultured for 24 hours and treated for 4 hours with either DMEM (control) or 1 mM DB or 30 µM aloin. In total 48 mRNA samples were subjected to RNAseq analysis. Overall design: 6 groups of human jejunal crypts of obese subjects: 1) TAS2R43+, DMEM treatment (n=8), 2) TAS2R43+, 1 mM denatonium benzoate (DB) (n=7), 3) TAS2R43+, 30µM aloin (n=6), 4) TAS2R43-, DMEM treatment (n=5), 5) TAS2R43-, 1 mM DB (n=6), 6) TAS2R43-, 30 µM aloin (n=4)  3 groups of human jejunal crypts of lean subjects with a TAS2R43+ genotype: 1) DMEM treatment (n=4), 1 mM DB (n=4), 5) 30 µM aloin (n=4)</STUDY_ABSTRACT>
      <CENTER_PROJECT_NAME>GSE186509</CENTER_PROJECT_NAME>
    </DESCRIPTOR>
    <STUDY_LINKS>
      <STUDY_LINK>
        <XREF_LINK>
          <DB>pubmed</DB>
          <ID>34784295</ID>
        </XREF_LINK>
      </STUDY_LINK>
    </STUDY_LINKS>
  </STUDY>
</STUDY_SET>
